Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02890 GTTGAGAGCTTTGTTTTACTTGCAAGATTTAGTATCATTCCTGCAAAGGGAGGCTTTGCAATTTGTCCTGCACATAACAACATATATGCTGTCTATGTTGCTGCAAACAGCAGATGCTGTTACTCTCTATATATTTCTTTTCTTTATTATTTTAGGGACGGGGAAGGGAGTAGAACTCTTCTTTTATCATTTGGGAATTGCAAGATAAATGAAAATGGACATATACGACAAGTTGGCATGTGGGGGGACAGTTTTAAAGTTCATGGAGGCCTGAATTCAATTGCTTCACCAATGTTAATGGTTGACACTAGTATAGAGAACAAGTCTGAGTATATACCTCAAGAATCAAGAGAGCCTTCTGGAGCCGATCAAGAGACTGCAAATAAAGTTACTAATAAGATGCTAAGACGCCTAGCTCAAAATCGAGAGGCTGCTCGGAAAAGTAGGCTGCGGAAAAAGGCTTACGTTAAACAACTAGAATCAAGTCGTTTGAAGCTCCTGCAATTGGAGCTGGAAATTGGGAAAGCAAGAAAGCAGGGTCTGTACATGGGCACGGCATTAGATGCTAGCTACATAGGATCAACAACAGAAACAATAAACCCAGGGATTGTTGCTTTTGAAATTGAATATGGACAATGGGTTGAAGAGCAACAAAGGCGGAATGAAGAGCTTAGACATGCATTTCAAACACAGGCGCCTGATGTACAACTCAATGTATTGGTTCAGAATGTTTTGAATCATTATTCAAATCTTTTCAGAATGAAAGCAGATGCTGCAAAGGCTGATGTGCTCTATTTACTCTCTGGTGTGTGGAAAGCATCAGTGGAGCGCATTTTCCTTTGGATTGGAGGGTCCCGTCCATCACAGCTTCTAAACATCATCGTGCCACAACTTGAGCCTTTGACTGATCAACAAAAAGCTGGTATTAGCAACCTCCGCCTATCATCTCAGCAAGCGGAAGATGCTCTTTCACAAGGATTGGAAAAACTTCAGCAGAGTTTGGTCCACGACATGGCTGTTGATCCATTGGGTGCAGGAAACTTCGGACTTCAGATGGCTCTTGCTATGGACAAATTTGAGGCACTTGAAGGTTTCGTAAGCCAGGCAGATCACCTTAGGCAACAAACTCTGAAGTACATGTCACGCATCCTGTCAACTCACCAAGCGGTTCGTGGCTTGCTGGCTCTTGGGGAATACTTTCACCGTCTTCGCACTCTTTGCTCTCTTTGGGCTGCACGTTCATGTGACCTTCCCTAACTTAGGCTCCTCAAATAACCTAAGATTGCTCCTTAAAGGAAGACACCTTACTGCTTCCACAACATCTGTTATGTGCTTTCCACAACTGTTACTCCAGTTTTGGATATGAATATACGAGTATGAATGTATGAATGTAAGTTAATGCCGTGTAGTACCATGAAGCAAAATTATGTGATTTGCTACTCTTGAG 1447 0.4229 VESFVLLARFSIIPAKGGFAICPAHNNIYAVYVAANSRCCYSLYISFLYYFRDGEGSRTLLLSFGNCKINENGHIRQVGMWGDSFKVHGGLNSIASPMLMVDTSIENKSEYIPQESREPSGADQETANKVTNKMLRRLAQNREAARKSRLRKKAYVKQLESSRLKLLQLELEIGKARKQGLYMGTALDASYIGSTTETINPGIVAFEIEYGQWVEEQQRRNEELRHAFQTQAPDVQLNVLVQNVLNHYSNLFRMKADAAKADVLYLLSGVWKASVERIFLWIGGSRPSQLLNIIVPQLEPLTDQQKAGISNLRLSSQQAEDALSQGLEKLQQSLVHDMAVDPLGAGNFGLQMALAMDKFEALEGFVSQADHLRQQTLKYMSRILSTHQAVRGLLALGEYFHRLRTLCSLWAARSCDLP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02890 418 SUPERFAMILY Leucine zipper domain 133 163 IPR046347 GO:0003700|GO:0006355
Pste2g02890 418 Gene3D - 133 176 - -
Pste2g02890 418 ProSiteProfiles DOG1 domain profile. 203 413 IPR025422 GO:0006351|GO:0043565
Pste2g02890 418 FunFam BZIP family transcription factor 132 181 - -
Pste2g02890 418 Pfam bZIP transcription factor 133 166 IPR004827 GO:0003700|GO:0006355
Pste2g02890 418 SMART brlzneu 129 189 IPR004827 GO:0003700|GO:0006355
Pste2g02890 418 Coils Coil 159 179 - -
Pste2g02890 418 Pfam Seed dormancy control 222 295 IPR025422 GO:0006351|GO:0043565
Pste2g02890 418 PANTHER TRANSCRIPTION FACTOR TGA9 73 414 - -
Pste2g02890 418 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 136 151 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02890 Pste-Chr2 28988568 28992531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02890 118 413 Calmodulin-binding Proteins AT1G22070 61.074 2.63e-124 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste2g02890 DOG1 1.6e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02890 2 28988568 28992531 Pste2g02890 2 28988568 28992531 ECH
Pste8g01891 8 13922634 13927768 Pste2g02890 2 28988568 28992531 PCT