Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02884 AAGTTCAAGGAGTGCCCACATCTAGATAAAAGCCAAAGACTTGAAATTGCTAAAGATCTAGGGCTTGAACCAAAACAAGTTAAATATTGGTTTCAAAATAAGAGGACTCAAACAAAGCATCAAACTGAGCGCGCAAATAACAATACCCTTCGTGTTGAGAATGAAAGAATGCAGAATGAAAACCTGGTACTGAAAGAGTCATTGAAGAATATAATTTGTCCATCTTGTGGGGGTCCACGTAATAGCGATGAAAGGAGTGAACTTTCTCTAGCACAACTTCGTCTTGAAAATGCTCGCCTAAAAGCAGAGCGTGAGAAGGTGTCTAATCTTCTTGTACAGTACATGGAGAAATTACCAGTGTCAGAACTAAACATTGAGTCAATTCCTATAGGAGGATCTTCATCATGTGGTCCATTATTGGGAAGTTCTCTAAAGCAAGTCACTGGTTCAACAAGTCGTTCATTTCAAGATGAAGATACCATGTCCACCCCAATGACCCTAGGGAGCAAAATAACACAAATGGAAAAAGCAATTATGTCAAAGACTGCAATGGCTGCTAAGGAAGAATTACTCAAGCTTTTGTGCACCAATGAGCCCTTATGGGTCAAGTCTACAATTAATCAGAGATATGTTCTTCATCTTGAATGCTATGAAAGGTTCTTTCCAAGGACTAACCACTTCAAGAATTCCAAAGCGCGTGTAGAATCATCGAAAGCTTCACAAATTGTGAGAATTAAGGCGGTGGAATTAGTTGGCATGCTTTTGAATTCGGAAAACTGGGCAAATCTTTTCTCAACAATTGTTACAAAAGCGCGCACAATCGAAATACTTGAAAATGGTTCATTAGAAAATAGAAGTGGAGCTTTGTTGTTGATGTGTGAAGAGATGCATGTTCTTTCACCTTTAGTGCAACCTCGGGAATTCTACTTCATTCGCTATTGTTACCAAGTTGAAGCAAAAGTATGGGTGATAACAGATGTTTCAGTTGACTGCAAGAGAAAAAACAACCATGATACTAATTGTTGGAGGTTTCCCTCAGGATGCATGATTCAAGAAATTTCTAATGGGATGTGCCAATCTGGATTGGAAGTACGTGTGTGGGTTTCTTGGGTTGAACATGTTGAATTGGATGAAAAATTCCAAACACATCAATTGTATAGAGAACTTGTTAACAACAATTTTGCATATGGAGCCGAAAGATGGCTATTGGAACTTCAAAGAATGTGTGAAAGATTTACATGTGTCAAGGCTGAACACATACTTAATTATGACGTGGGAGGAGTGATCACTACTCTTGGAGGAAGGATGAGTATGATGAAGCTTTCTCATCAAATGGTTAAAAGCTTCTATGAAAATTTAAGCATGTCAAGTAAGATTGGCTTCTCACAACATGTAGCAGAGGAGAATAGTGGGATTAGAATTTCTACACGAAAAATCACATACCCAAGTCAGCCTAATCCCATGATTATAATCACTTCTACTACCTCTTTTTGGCTTCCCCTCCCTTCTCAAAATGTTTTTGACTTCTTTAGAGATCCAATAAGACGCGCTAAGTGGGATGTTATGTGTTATGAAAGTCCCATGCACGAGATTGCACGCATGTCAATTGGAACTCACTCTAACAACTATATATCGATTATTCAGATTAATCAAATTTTTATTTTTATCGTTACTGTTTCTAATGCGAACTTGATTAAACTTACTTTGATCATGCATGTGAAGCAGCCTATCCACCCAACTACGAGTAATATGGTAATTATTCAAGAAAGTTGTATTGATCCTATGGGATCATATGTGGTATATTCTCCTGTCAATATACTTGACATAAAAAGGACTGTAAATGGTCAAGATTCATCAGCATTCACAATCTTTCCATCAGGCATTGTCATCTCAGAGGATGGAAAATCTATAGCAAATGCTTGTGCATCCAGTAGTGGAAAAGGAGATGTAAGGACAAGAGGTTCATTATTGACTGTAGCTTTCCAAATACTGATGAGTAGTCCAACAACCATGACGATGGAATGTGTGACTGTTGCTAACTCTGTCATCACTTCAACTATCAAAAACATATATGATTCTTTGATGACTAGTTCCAATTTGGAGCTT 2106 0.378 KFKECPHLDKSQRLEIAKDLGLEPKQVKYWFQNKRTQTKHQTERANNNTLRVENERMQNENLVLKESLKNIICPSCGGPRNSDERSELSLAQLRLENARLKAEREKVSNLLVQYMEKLPVSELNIESIPIGGSSSCGPLLGSSLKQVTGSTSRSFQDEDTMSTPMTLGSKITQMEKAIMSKTAMAAKEELLKLLCTNEPLWVKSTINQRYVLHLECYERFFPRTNHFKNSKARVESSKASQIVRIKAVELVGMLLNSENWANLFSTIVTKARTIEILENGSLENRSGALLLMCEEMHVLSPLVQPREFYFIRYCYQVEAKVWVITDVSVDCKRKNNHDTNCWRFPSGCMIQEISNGMCQSGLEVRVWVSWVEHVELDEKFQTHQLYRELVNNNFAYGAERWLLELQRMCERFTCVKAEHILNYDVGGVITTLGGRMSMMKLSHQMVKSFYENLSMSSKIGFSQHVAEENSGIRISTRKITYPSQPNPMIIITSTTSFWLPLPSQNVFDFFRDPIRRAKWDVMCYESPMHEIARMSIGTHSNNYISIIQINQIFIFIVTVSNANLIKLTLIMHVKQPIHPTTSNMVIIQESCIDPMGSYVVYSPVNILDIKRTVNGQDSSAFTIFPSGIVISEDGKSIANACASSSGKGDVRTRGSLLTVAFQILMSSPTTMTMECVTVANSVITSTIKNIYDSLMTSSNLEL 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02884 702 Gene3D - 183 455 IPR023393 -
Pste2g02884 702 Pfam START domain 184 411 IPR002913 GO:0008289
Pste2g02884 702 Coils Coil 40 67 - -
Pste2g02884 702 ProSiteProfiles START domain profile. 172 414 IPR002913 GO:0008289
Pste2g02884 702 SUPERFAMILY Homeodomain-like 2 44 IPR009057 -
Pste2g02884 702 Coils Coil 83 117 - -
Pste2g02884 702 SUPERFAMILY Bet v1-like 173 412 - -
Pste2g02884 702 CDD START_ArGLABRA2_like 176 410 - -
Pste2g02884 702 SUPERFAMILY Bet v1-like 435 666 - -
Pste2g02884 702 CDD homeodomain 2 41 IPR001356 GO:0003677
Pste2g02884 702 Gene3D - 1 58 - -
Pste2g02884 702 Pfam Homeodomain 2 40 IPR001356 GO:0003677
Pste2g02884 702 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 693 IPR042160 -
Pste2g02884 702 ProSiteProfiles 'Homeobox' domain profile. 1 41 IPR001356 GO:0003677
Pste2g02884 702 SMART START_1 181 411 IPR002913 GO:0008289
Pste2g02884 702 SMART HOX_1 1 45 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02884 Pste-Chr2 28901018 28906666 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02884 2 694 Homeobox Transcription Factor Family AT1G73360 38.928 1.35e-155 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste2g02884 START 2e-28 CL0209