Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02872 AGGTTAAAAAGGACAAAGCATGGAGTGTCAACCGGTACTCATTTCCCTTTTCTCCTTAACCTGGTTATGGCTACAATGTTGCTATACCGTACTTAATTTCTGAATTTTAACTTTAAAGTTCTAATCTTTAAGCCAACCTCTACCCTCTGCTTCAAAAGATTGATACTTGAGGCGAGGGATTTCCGCTGCGGTTCACATTGTGCTTAGGAAGTGTTTTTGTGCATCTTATGTTTCTAGCATACTGCATGCAGCTAATGCTTGTCTCTGCTGAAGCAGCTGCACTGCATTTGTTAAGTTTTTTCTTTTTGTGGAAGAACAATGAATCTCTTGGAGCTTCTGGTTTCCCATCATTTGTGGTTGTTTATTAGTAGGTTAGTATACTTGTGGCTTTGAAGAATCCCTCTTTTGGTTTTAGCTGCAACTAACCCTGCATATATAGTGTGGATTGACAAGCTTGAGGACCCAACTCTCTTTCTGGAGACTGTTCTTACTTGCTTCTATTCTACATTCTTTTACAAGAAGTGAAAAAAGGGCATCTTGGAATTCTATTTGTACCTTTTGTTGGTGGGCTGGAAACAAGTCACTTATCCTTTTGAACTAGTAGGGTGCAAGCTCCCTTTCTGTCTTCACTTAGTGTGAACTACACAGAAGTATTCTGGTGTATAGAAGACTATGAAGCTCTTTAGCCTTTTAGTGTTATCTTTATATTTCTTCTCTGCGGTGGGGCAGCTTCCTTCTCAGGACATTTTAGCATTGCTGGAGTTTAAGAAAAGCATCAAGCATGACCCTACTGGTTATGTTCTCAATTCCTGGAATGAGGAATCCATTGACTTCGATGGATGCCCATCTCAATGGAATGGAGTTCTGTGCAATAGTGGTAATGTTGCTGGGGTTGTCCTTGATAACTTGGGTCTCTCTGCTAACACTGACCTGAGTGTGTTCTTAAATCTCTCTAAGCTTGTAACATTCTCCATGTCCAACAATTCCATATCTGGAAAACTACCTGTCAACATTGCTGATTTCAAAAGCCTTGAATTCCTAGATATCTCCAATAACCTGTTCTCCTCATCCTTGCCGTCGGGAATTGGTAAGTTAGGCAGCTTGCAGAATCTGTCATTGGCTGGAAACAATTTCTCGGGTCCAATTCCTGACTCCATTTCAGAAATGGCCTCCATCAAGTCCCTGGACTTGAGCCACAACTCCTTTTCTGGAGAGCTTCCAACATCATTAACTAAGCTGAATAGCCTTGTGTCTCTTAACTTGTCTCATAATGGCTTCACTGGAAAAATTCCCAAAGGTTTTGGACAGATCCCTGCACTTGAAATACTTGACTTGCATGGGAATATGCTTGAAGGTAATTTGGATCTTGAATTTATGCTTTTATCAAGTGCCATCTATGTTGATTTAAGTGAGAACATGTTGTCAAGTTCTGATTCCAAGCAGAAGTTTCTACCACGGATATCTGAAAGTATTAAGCATCTGAATCTAAGCCACAACAAGCTTACGGGGTCATTGGCTAGTGCAGCTGCTGAACCTGTTTTTGAAAACTTGAAGGTGTTGGACCTCAGCTACAATCAGTTGTATGGAGAATTGCCCGGATTTGATTTTGTTTATGATCTCGAAGTTCTCAGACTCAGCAACAACAGGTTTTCAGGATTTATTCCTAATGGCTTGCTGAAAGGAGACTCTTTGGTTTTAACTGAACTGGATTTGAGTGCCAACAATCTCTCAGGGCCACTTAGTATTATTACATCAACAACACTTCACTCTCTTAATCTCTCGTCAAATGAGTTCAATGGTGAACTACCACTTCTGACTGGAAGCTGTGCTGTACTTGATCTGTCTAATAACAAATTGGAAGGAAATTTATCCAGGATGTTGAAATGGGGGAATATAGAATTTCTTGATCTCAGTGGGAATCGTTTGACAGGGGCCATCCCCGAGGTAACTCCTCAATTTTTGCGATTAAACTATTTAAACCTATCCCATAATTCTCTTAGCAGCTCCCTTCCAAAAGTCTTAACACAGTATCCAAAGCTTAGAGTGCTTGACATTAGTTTCAACCAATTAGATGGACTACTTCTAGCTAATCTGCTCACACTGCCCACGTTGCAAGAGTTGCATCTTCAAAATAATATGATCTCTGGTGGCATCCATTTATCATCTTCTCCTGACCAATCCGATCTTCAGATTCTTGATCTTTCTTACAACCAGCTTAATGGCTATTTTCCTGATGAGTTTAGGTCATTAACTGGCCTGAAAGTGCTAAATATTGCTGGAAATAAATTTTCTGGTTCTCTTCCAACTACGATTGCTGATATGAGTTCACTAGACTCATTGGATATATCAGATAATCATTTTACTGGCCCTCTACCAAGTAACATGCCAAAGGGGCTTCAAAACTTCAATGCTTCACAAAATGATCTGTCTGGAGACATCCCAGAAGTTCTTAGCAAGTTTCCTAGTTCTTCTTTCTTTCCTGGGAATACCAAATTACATTTTCCAAATGGTCCTCCTGGATCAACTACTTCACCTGCTGAAAGTTCCAAGAGGAAGCATATGAACACCATCGTTAAAGTAATAATCATAGTGTCATGTGTGGTTGCCCTCTTCATATTAATCTTGCTTGCTGTCTTCATACACTACATACGTATATCAAGATCTCCACCAGAGTATGATACAAGTAAGGATACCCACAGGCGTCCTCAACCAATTATCTCAGCTCCTGTTCGTACGACAGACAGGGGTGGTGCTTTGGTTGTTTCGGCTGAGGACCTTGTGACCTCACGCAAAGAGTCACCGTCAGAGATCATCACCTCTGATGAAAAATCGGCAGCTGTAACAGGGTTCTCTCCATCAAAGCAAAGCCACTTTTCATGGTCACCAGAATCTGGTGATTCATTTACTGGTGAAAATCTTGCAAGACTAGATACGAGATCACCAGATCGGCTGATTGGAGAGCTTCATTTTCTTGATGATACAATAACATTGACACCTGAGGAGCTCTCAAGGGCCCCAGCTGAAGTTTTAGGAAGAAGTAGTCATGGTACTTCTTACAAGGCAACTTTGGAGAATGGTTTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCTAAACAAAGAAAAGAATTTGTCAAGGAGACTAAAAAATTTGCAAACATAAGGCATCCAAATGTTGTTGGATTGAGAGGATATTATTGGGGTCCTACACAGCACGAGAAGCTTATACTATCTGATTACATTTCACCAGGAAGTCTTGCAAGTTTTCTTTACGATCGACCTGGAAGGAAAGGTCCAGCATTAACTTGGGCTCAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGTGCTGTTCCTCATGGGAACCTCAAAGCTACAAATGTGTTGTTAGACACAACTGATATGAATGCACGTGTTGCTGATTACTGCCTTCATCGACTTATGACTCAAGCAGGTACTATTGAACAGATTCTTGATGCTGGGGTCTTGGGTTATCGGGCGCCGGAGTTGGCTGCTTCCAAGAAGCCAATGCCCTCTTTCAAATCAGATGTCTATGCTTTTGGAGTAATACTTTTGGAACTTTTAACTGGAAGATGTGCTGGTGATGTGATATCTAGTGAGGAGGGAGGTGTTGATCTGACAGATTGGGTAAGATTGCACGTAGCAGAAGGCCGAGGTTCAGAATGTTTTGATGCCACCTTGACACCAGAAACGAGTAATCCAGTTGCAGAAAAGGGAATGAAGGAGGTACTGGGAATTGCGATTCGATGCATTCGATCTGTTTCTGAAAGGCCTGGTATCAAGACTATTTATGAAGATCTCTCTTCTATATAGTCTTCTCATGCTAACTATTTGAACTTTGACATATTATGGGAATTAATGTCTCATTAGTGTCTCATATTTGTTCAGAGCTTGGCCTTTTTAACATGTTTGTATTAACCATTTTTTTTAGCTGTAAAAATGGGGCATGTGCCAAAAGCATATACATGGATGTTACTTTATGGGTTTTGGCCATCTAATTTTGTCTTCAAATGGTATGTGTTCTGAATGCTCATTTGTTTTCAAGTCTATAGTTTAAGGCTGTACAAGTTAGTCATGTGATTAGCACTTAGCAGTTTTATTTTTTTGTTGATTTATTTGATCTCTGGAGTTGATGGCCAAAGGTATTGGACATTGTTCTTAGCGAACTCAGCTGGTTTTGCTTTCAGGAAGTTAGAGTGCCACCAATGAGTAACACTACATGATACTGCACAGTGCTGCTGTTTACCATTGTCATGTAATCACAATGGTTGTGGAAGCCATCATTTATTAAATTCAATTTTTG 4351 0.405 MKLFSLLVLSLYFFSAVGQLPSQDILALLEFKKSIKHDPTGYVLNSWNEESIDFDGCPSQWNGVLCNSGNVAGVVLDNLGLSANTDLSVFLNLSKLVTFSMSNNSISGKLPVNIADFKSLEFLDISNNLFSSSLPSGIGKLGSLQNLSLAGNNFSGPIPDSISEMASIKSLDLSHNSFSGELPTSLTKLNSLVSLNLSHNGFTGKIPKGFGQIPALEILDLHGNMLEGNLDLEFMLLSSAIYVDLSENMLSSSDSKQKFLPRISESIKHLNLSHNKLTGSLASAAAEPVFENLKVLDLSYNQLYGELPGFDFVYDLEVLRLSNNRFSGFIPNGLLKGDSLVLTELDLSANNLSGPLSIITSTTLHSLNLSSNEFNGELPLLTGSCAVLDLSNNKLEGNLSRMLKWGNIEFLDLSGNRLTGAIPEVTPQFLRLNYLNLSHNSLSSSLPKVLTQYPKLRVLDISFNQLDGLLLANLLTLPTLQELHLQNNMISGGIHLSSSPDQSDLQILDLSYNQLNGYFPDEFRSLTGLKVLNIAGNKFSGSLPTTIADMSSLDSLDISDNHFTGPLPSNMPKGLQNFNASQNDLSGDIPEVLSKFPSSSFFPGNTKLHFPNGPPGSTTSPAESSKRKHMNTIVKVIIIVSCVVALFILILLAVFIHYIRISRSPPEYDTSKDTHRRPQPIISAPVRTTDRGGALVVSAEDLVTSRKESPSEIITSDEKSAAVTGFSPSKQSHFSWSPESGDSFTGENLARLDTRSPDRLIGELHFLDDTITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFVKETKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPALTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTTDMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISSEEGGVDLTDWVRLHVAEGRGSECFDATLTPETSNPVAEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02872 1062 Pfam Leucine rich repeat 411 466 IPR001611 GO:0005515
Pste2g02872 1062 Pfam Leucine rich repeat 505 563 IPR001611 GO:0005515
Pste2g02872 1062 FunFam Leucine-rich repeat receptor-like protein kinase 765 857 - -
Pste2g02872 1062 MobiDBLite consensus disorder prediction 708 743 - -
Pste2g02872 1062 SUPERFAMILY L domain-like 501 599 - -
Pste2g02872 1062 ProSiteProfiles Protein kinase domain profile. 780 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02872 1062 SUPERFAMILY Protein kinase-like (PK-like) 783 1059 IPR011009 -
Pste2g02872 1062 FunFam Pollen receptor-like kinase 1 858 1062 - -
Pste2g02872 1062 Gene3D Transferase(Phosphotransferase) domain 1 859 1062 - -
Pste2g02872 1062 ProSiteProfiles Leucine-rich repeat profile. 292 314 IPR001611 GO:0005515
Pste2g02872 1062 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Pste2g02872 1062 Pfam Protein tyrosine and serine/threonine kinase 784 982 IPR001245 GO:0004672|GO:0006468
Pste2g02872 1062 SMART LRR_typ_2 189 212 IPR003591 -
Pste2g02872 1062 SMART LRR_typ_2 550 574 IPR003591 -
Pste2g02872 1062 SMART LRR_typ_2 526 549 IPR003591 -
Pste2g02872 1062 SMART LRR_typ_2 117 141 IPR003591 -
Pste2g02872 1062 SMART LRR_typ_2 290 312 IPR003591 -
Pste2g02872 1062 SMART LRR_typ_2 429 452 IPR003591 -
Pste2g02872 1062 SMART LRR_typ_2 313 337 IPR003591 -
Pste2g02872 1062 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Pste2g02872 1062 Gene3D Ribonuclease Inhibitor 187 259 IPR032675 -
Pste2g02872 1062 Pfam Leucine Rich repeat 361 377 IPR001611 GO:0005515
Pste2g02872 1062 MobiDBLite consensus disorder prediction 607 626 - -
Pste2g02872 1062 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 381 615 - -
Pste2g02872 1062 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 264 - -
Pste2g02872 1062 Gene3D Phosphorylase Kinase; domain 1 772 857 - -
Pste2g02872 1062 Gene3D Ribonuclease Inhibitor 260 621 IPR032675 -
Pste2g02872 1062 MobiDBLite consensus disorder prediction 715 743 - -
Pste2g02872 1062 PANTHER OS07G0626500 PROTEIN 6 1062 - -
Pste2g02872 1062 SUPERFAMILY RNI-like 76 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02872 Pste-Chr2 28793648 28799244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02872 24 1010 Receptor kinase-like Gene Family AT4G36180 28.610 3.90e-89 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste2g02872 PK_Tyr_Ser-Thr 1.2e-28 CL0016