Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02857 GTGAGACGTTCTCAACTTTTGAGATTAGCCAATCAAAGTGGAGCTGCGACCACAACTATCCTCATCCAGCAGAGACTTATACAAAAGCCTGCTGCTGCTCCTTTCAAGCAATCATCGCAATATATTGACCCATTTCAACAATAGTCGTGTAGATAAGATGGTATACTAATTTAACTTGCATCAATGCACATTAAGTACTAGTAGCAGGGATCACTCAAACATTTGAATTAAAGTTGAAACAACAACCATGAGTTCAGTTCCCAGCGTGAGAGTGAGTGATCAAGAAAACTTTCATGTTGAGGATAATAGTCAATTAGAGAGGTCCCTTTGGGTGCTGAATCCTCCCAGTCCACCACCTCTACGGAGAAAGCTGTTCAGTTCACTGAGGAACACCTTGTCCTTTTTCTCATCCAAGAAAAAAACATGTCTTGGACATGTTGTTTCATTCATGGAGACTTTGTTCCCCATCCTTACCTGGATCAAAGATTATAAAGCCTCCAAGTTTAAAGATGATTTGCTAGCTGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGTATAGGATACGCTAATTTAGCAAAACTTGATCCTCAATATGGATTGTACACTAGTTTTGTTCCTCCTCTTATCTATGCTCTTATGGGGAGTTCAAGAGAAATTGCAATTGGACCTGTGGCTGTAGTTTCATTACTACTATCCTCTTTGGTCCCCAAAGTGGTAGATCCTGCTGTTGATCCTGATGGCTACAGAAATGTTGTTTTCACCGTGACCTTATTTGCTGGAATCTTTCAAGCTACATTCGGTATTTGCAGGTGGTTTCCTGATCTGTTGGGGTTTCTTGTGGATTTTCTTTCTCATGCTGCATTAGTTGGATTCATGGCTGGCGCAGCCATCATTATTGGTCTTCAGCAGCTCAAGGGGTTGCTTGGGATTAATCATTTCACCACCAAAACTGATGCAATATCTGTGTTAGAATCTGTTTATAAGTCACTCCATCAACAAATTACTTCCGGAGAAAAATGGTACCCTCTGAATTTTTTCATCGGGTGTTCATTCCTAATTTTCCTTTTAACGGCCAGATTTATTGGCAGACGAAACAAAAAGCTTTTCTGGTTTCCTGCTATTGCTCCTCTTCTATCAGTTATATTATCAACTTTAATTGTGTATTTGTCTAAAGCTGATAAGAAAGGGGTTAATATAATAAAGCATGTGAAAGGAGGCCTGAATCCAAGCTCAGTTCACCAGTTGCAATTCCGTGGTCAACATGTTGGACAAGCAGCTAAAATTGGATTAATCTCTGCTGTTATTGCCCTCACAGAAGCAATAGCAGTCGGTCGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGAAACAAAGAAATGTTAGCAATGGGCTGCATGAACATTGCGGGATCTCTCTCTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCGGTAAATTTCAGTGCAGGATGTCAAACATCAATGTCAAATATTGTTATGGCAGTTACTGTGATTCTGTGTCTTGAGTTGTTTACAAGGCTTCTATACTACACTCCTATGGCCATACTCGCTTCTATCATTATCTCTGCACTTCCTGGATTAATTGACATAGGTGAAGCTTGCTATATTTGGAAGGTTGACAAATTCGACTTTCTTGCTTGCATTGGCGCATTCTTCGGGGTCCTGTTTGTATCGGTGGAAATTGGTCTTCTAGTTGCAGTGTCAATATCGTTTGCGAAGATACTAATACAGTCAATTCGACCTGGAATAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCTTTCTGTGATGTTAGTCAATATCCCATGGCCATAAGTACTCCAGGCATAATACTAAAGTGGGCCACAGAAGAAGAAAACGAACTTGCCAAGGGAAGGGCAATAATTTTAGACATGAGCAACATGATGAATGTTGATACTTCTGGGATTTTAGTACTGGAGGAACTGCACAAGAGATTGCTTTCGCGTGGTGTACAGTTGGCTATGGTCAACCCAAGGTGGCTAGTGATTCACAAGCTCAAAGTGGCACATTTTGTGGATAAAATTGGAAAGGAGCGGGTTTTCCTTACTGTTGCTGAAGCCGTAGATGCATGTCTATCTTCTAAACTCTCTGAACCATGAATTTCACGGGCCTTATCTGTAATGTACTGCATCATTGCATTGAATTACATTGACTCACGTAAAATGTAATGATCCATATTTGGCTATGTTCACTCCCACTATACTAGTGGACTTGTGTCCTGTACGGAAATGTCATGCAAGAGTATTGATGTTCTACGGAAAAGCTCCTTCCACTAACAACCAGGAGGAATGTCAAACAATCAAATATAAACAAAATAAGCTTTATTTTGGTATTGCATAAATAGAGAAGAGTAAAGAAAAG 2417 0.4034 MSSVPSVRVSDQENFHVEDNSQLERSLWVLNPPSPPPLRRKLFSSLRNTLSFFSSKKKTCLGHVVSFMETLFPILTWIKDYKASKFKDDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSFVPPLIYALMGSSREIAIGPVAVVSLLLSSLVPKVVDPAVDPDGYRNVVFTVTLFAGIFQATFGICRWFPDLLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGINHFTTKTDAISVLESVYKSLHQQITSGEKWYPLNFFIGCSFLIFLLTARFIGRRNKKLFWFPAIAPLLSVILSTLIVYLSKADKKGVNIIKHVKGGLNPSSVHQLQFRGQHVGQAAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLSSCYVATGSFSRTAVNFSAGCQTSMSNIVMAVTVILCLELFTRLLYYTPMAILASIIISALPGLIDIGEACYIWKVDKFDFLACIGAFFGVLFVSVEIGLLVAVSISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMAISTPGIILKWATEEENELAKGRAIILDMSNMMNVDTSGILVLEELHKRLLSRGVQLAMVNPRWLVIHKLKVAHFVDKIGKERVFLTVAEAVDACLSSKLSEP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02857 635 ProSiteProfiles STAS domain profile. 555 627 IPR002645 -
Pste2g02857 635 Pfam Sulfate permease family 86 477 IPR011547 GO:0016020
Pste2g02857 635 CDD STAS_SulP_like_sulfate_transporter 555 620 - -
Pste2g02857 635 SUPERFAMILY SpoIIaa-like 553 627 IPR036513 -
Pste2g02857 635 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Pste2g02857 635 PANTHER SULFATE TRANSPORTER 54 628 IPR001902 GO:0016020|GO:0055085
Pste2g02857 635 NCBIfam sulfate permease 73 623 IPR001902 GO:0016020|GO:0055085
Pste2g02857 635 Gene3D STAS domain 525 631 IPR036513 -
Pste2g02857 635 Pfam STAS domain 553 623 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02857 Pste-Chr2 28622989 28627664 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02857 20 632 Inorganic Solute Cotransporters AT5G10180 60.681 0.0 774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02857 2 28622989 28627664 Pste2g02857 2 28622989 28627664 ECH
Pste8g01876 8 13664481 13670308 Pste2g02857 2 28622989 28627664 PCT