Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02832 TTTTAAACCTAAAACAAAAGAAACAAAAACAAGTACCTGAGCGAGCGAGCGAGTCCTTCTCTTTCGTAAGTTTGGTTCTCTTGTGACTTGTTTCTTCCAACACAGCGTGCAGTCTTCTTCCCTCTACGAATGCATAATATTCACAGTGACATCTCATCTTGAAATCCCTAATTTCATTGCAACCTCACTCCTCAATTCCAATGGAGGATTCCGAGGGAGTCCTCAGCTTCGATTTCGAGGGCGGCCTCGATGCTGCTCCCTCCGCCGCCGCCGCCCCGTCCGGTCCACTCGTTCAGCACGACTCCTCCGCAGCCGCCTCCGCCATCTCCAACGGAGGCCCCGCCGCCCCTGCCCCCTCCGCGGCCGACCCCTCCGCCGGCAACCTCCCCGGGCGGCGGAGCTTCCGGCAGACGGTGTGCCGGCACTGGCTGCGCAGCCTCTGCATGAAGGGCGACGCGTGCGGGTTTCTGCACCAGTACGACAAGGCGCGGATGCCTGTGTGCCGCTTCTTCAGACTCTTCGGAGAGTGCCGAGAACAGGATTGCGTTTATAAACACACCAATGAAGACATCAAGGAGTGTAACATGTACAAGTTGGGATTTTGTCCTAATGGGCCTGATTGTCGATATAGGCATGCGAAATCTCCTGGACCTCCCCCTCCTGTTGAAGAGGTCCTTCAAAAGATCCAACATTTGTATTCCTACAATTATAACTCATCCAACAAATTTTTTCAACAAAGGGGTGCTAGTTATAATCAACAAGCTGAAAAATCCCAGCTTCCTCAAGGAACCAATTCTACAAATCAAGGGGTGACCGGAAAACCATTACCTGCAGAGTCGGGAAATGCCCAGCCTCAGCAACAAGTTCAACAACCTCAGCAGCAGCAGGTCAATCAGAGCCAAATACAAAATCCTGCTAATGGCCAGCCTAATCAAGCCAATAGAACTGCAACTCCTTTACCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAATCGTGAAAATTTGGAGTTATCTGTACAACAAGGAGTTTGGGCAACTCAAAGGAGCAATGAATCCAAACTAAATGAAGCATTCGACTCTGTGGAAAATGTGATATTAATTTTCTCAGTCAATCGTACTAGACATTTCCAGGGTTGTGCAAAGATGACATCCAGGATTGGTGGTTCTGTTGCTGGGGGGAACTGGAAATATGCTCATGGAACTGCACATTATGGGCGGAATTTCTCTGTTAAATGGTTGAAGTTATGTGAACTGTCATTCCACAAAACTCGCCATTTAAGGAATCCATACAATGAGAACTTACCAGTGAAGGCTATCTCAATTGCAGCAGAGTCTAAACGGGAAGAAGAGAAAGCAAAGGGAGTGAATCCAGATAATGGAGGAGAAAATCCAGATATTGTCCCATTTGAAGACAATGAAGAAGAGGAAGAGGAAGAGAGTGATGAAGAGGAAGAGAGCTTTGGTCATGTTGTAGGGCCAGCTGGCCAAGGAAGAGGTAGGGGAAGAGGTATGATGTGGCCGCCTCATATGCCTCTTGGGCGTGGAGCTCGACCCATGCCTGGAATTCAGGGCTTTAACCCTGTAATGATGGGGGATGGGTTATCCTACGGGCCTGTTGGACCTGATGGTTTTGGTGTGCCAGACCTTTTTAGCATGGGACCCCGTGCATTTGCACCATATGCTCCTCGGTTCTCTGGTGATTTTGGGGGTCCCCCAGCAGCCATGATGTTTCGTGGACGACCATCTCAACCGGGGATGTTTCCTGGTGGTGGATTTGGGATGATGATGAATCCTGGACGTGGTCCCTTTATGGGAGGGATGGGAGTTGCAGGTGCAAATCCACCAAGAGGGGGTAGGCCTGTTAATATGCCTCCAATGTTTCCACCACCTCCACCCATACCTCAAAATGCAAATCGAGTTGCCAAAAGAGATCAAAGAAATACTGATCGGAATGATAGGTTTGGTTCAGGATCAGAGCAGGGTAAGAGTCAAGACATGCTCAGTCAAAGTGGTGGACCTGACGATGATGTGCAGTATCAGCAAGGATACAAAGCGAATCAAGATGATAATCCTGCTGTGAACAACTTCAGAAACGACGATAGTGAAAGTGAGGATGAGGCACCTAGGCGGTCCAGACATGGGGAAGGAAAAAAGAAAAGACGAGGCACAGAAGATGTTAACACAAACTTTAATCATTAGCTAGCTTTTGCTTTTACCAAGCACTACATATTGATGATCCACTAACCAGGATATGCCAGTTTCCAATGTTTTTTATTTTTGACAGATTGCTTTGTATGAGTTCTTTTCGCCCCCTCTTAAGAAGACCTGGGGACAGGATTGCTTCAGAAAAGATTTAAAATTATGTTCATGGATCATATAATTTTTATTCATGGTATATTTAATGTTGGTGTATCTGGACAAAGATGATAATATAGTAGGCTTGTGAGTGTACACCTATGTATTTGTAAAGGAATCATAACATTAGAGTTCTCAATGAAAAATGCGCGG 2516 0.467 MEDSEGVLSFDFEGGLDAAPSAAAAPSGPLVQHDSSAAASAISNGGPAAPAPSAADPSAGNLPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLFGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGASYNQQAEKSQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQPQQQQVNQSQIQNPANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGHVVGPAGQGRGRGRGMMWPPHMPLGRGARPMPGIQGFNPVMMGDGLSYGPVGPDGFGVPDLFSMGPRAFAPYAPRFSGDFGGPPAAMMFRGRPSQPGMFPGGGFGMMMNPGRGPFMGGMGVAGANPPRGGRPVNMPPMFPPPPPIPQNANRVAKRDQRNTDRNDRFGSGSEQGKSQDMLSQSGGPDDDVQYQQGYKANQDDNPAVNNFRNDDSESEDEAPRRSRHGEGKKKRRGTEDVNTNFNH 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02832 668 SUPERFAMILY CCCH zinc finger 67 98 IPR036855 GO:0046872
Pste2g02832 668 SMART c3hfinal6 67 93 IPR000571 GO:0046872
Pste2g02832 668 SMART c3hfinal6 123 147 IPR000571 GO:0046872
Pste2g02832 668 SMART c3hfinal6 95 121 IPR000571 GO:0046872
Pste2g02832 668 MobiDBLite consensus disorder prediction 20 63 - -
Pste2g02832 668 ProSiteProfiles Zinc finger C3H1-type profile. 121 148 IPR000571 GO:0046872
Pste2g02832 668 MobiDBLite consensus disorder prediction 181 253 - -
Pste2g02832 668 FunFam Cleavage and polyadenylation specificity factor 30 kDa subunit 63 123 - -
Pste2g02832 668 Gene3D ph1033 like domains 238 384 - -
Pste2g02832 668 MobiDBLite consensus disorder prediction 403 421 - -
Pste2g02832 668 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 35 373 IPR045168 -
Pste2g02832 668 MobiDBLite consensus disorder prediction 634 662 - -
Pste2g02832 668 MobiDBLite consensus disorder prediction 554 572 - -
Pste2g02832 668 Pfam YT521-B-like domain 258 374 IPR007275 GO:0003723
Pste2g02832 668 Gene3D - 63 125 - -
Pste2g02832 668 MobiDBLite consensus disorder prediction 593 633 - -
Pste2g02832 668 MobiDBLite consensus disorder prediction 578 592 - -
Pste2g02832 668 MobiDBLite consensus disorder prediction 381 439 - -
Pste2g02832 668 MobiDBLite consensus disorder prediction 547 668 - -
Pste2g02832 668 ProSiteProfiles Zinc finger C3H1-type profile. 67 94 IPR000571 GO:0046872
Pste2g02832 668 CDD YTH 259 373 IPR007275 GO:0003723
Pste2g02832 668 ProSiteProfiles YTH domain profile. 258 393 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02832 Pste-Chr2 28381291 28394806 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste2g02832 YTH 5.5e-35 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02832 2 28381291 28394806 Pste2g02832 2 28381291 28394806 ECH