Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02823 ATGGCAGCTATGATGGATTTTTACAGCAGGACGGAGTTTCAAATGCAGTCAGATCCCTTCAGGGGTGAACTAATGGAAGTTCTTGAACCTTTTATGAAAAGTCCTTCCCCAACCCCCTGTTTCCCTTCTACTTCTTACTCTCCTTCTCTCAACTTGTTCCCCTCCTCCCCGTCCCTCCCTAACTTTTTCTCAAACGGTTGCTCCAAATCGATGACCCATGTATTCTCGGAGGGGTTATCATCCTTATCCAAGGAGGAAAGCGTATCTGGGTTTGGATTGGGGCTAGGGCTAGGGCCAGAGCAACCCACATCTCTTCTTGGCCTGAACCACCTAACCCCGTGTCAGATCGCTCAGATCCAGGCCCAAATCCAGATCCAGAGCCAGCAGAAGCAGAATCCGACCAGGCTGAGCTTCATGGGGCCTCGAGCCATCCCTATGAAGCACGTGGGCATGGGTCCGAAGGCGGCGAAGCTTTACAGAGGGGTTCGGCAGAGGCACTGGGGAAAGTGGGTGGCTGAGATAAGACTTCCGAAGAACCGGACGAGGCTGTGGCTGGGAACCTTCGACACGGCGGAGGAAGCCGCTCTGGCGTACGACAAGGCGGCGTACAAACTCCGAGGGGAGTTCGCGAGGCTGAACTTCCCCAACCTCCGACACCAGGGTTCCTCCGTGGGCGGAGACTTCGGGGAGTACAAGCCTCTTCATTCCTCTGTTGACGCCAAGCTTGAGGCCATTTGCGAAGGCCTTGCTGAGTTGCAGAAACAGGGGAAGAGCGATAAGCCGTCCAAGAGGTCGCGATCCAAACTGCCTCCTCCGCCTGTTGACAATAGCAGCACCAACAACAACTCCTCTTGTAAGGTGGATAGTGAAGGGTCTGAAGGTTCTTCGCCGCTCTCGGATCTCACATTTGCTGATGTCAGCGACCCCCACTGGGAAGGTGATTCGGATAATTTCAATCTCCACAAGTACCCCTCATATGAGATCGACTGGGATTCTCTGTGA 1002 0.5419 MAAMMDFYSRTEFQMQSDPFRGELMEVLEPFMKSPSPTPCFPSTSYSPSLNLFPSSPSLPNFFSNGCSKSMTHVFSEGLSSLSKEESVSGFGLGLGLGPEQPTSLLGLNHLTPCQIAQIQAQIQIQSQQKQNPTRLSFMGPRAIPMKHVGMGPKAAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPNLRHQGSSVGGDFGEYKPLHSSVDAKLEAICEGLAELQKQGKSDKPSKRSRSKLPPPPVDNSSTNNNSSCKVDSEGSEGSSPLSDLTFADVSDPHWEGDSDNFNLHKYPSYEIDWDSL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02823 333 FunFam Ethylene-responsive transcription factor 2 157 216 - -
Pste2g02823 333 SMART rav1_2 158 221 IPR001471 GO:0003700|GO:0006355
Pste2g02823 333 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 333 - -
Pste2g02823 333 MobiDBLite consensus disorder prediction 253 318 - -
Pste2g02823 333 ProSiteProfiles AP2/ERF domain profile. 158 215 IPR001471 GO:0003700|GO:0006355
Pste2g02823 333 CDD AP2 157 217 IPR001471 GO:0003700|GO:0006355
Pste2g02823 333 Pfam AP2 domain 159 208 IPR001471 GO:0003700|GO:0006355
Pste2g02823 333 Gene3D AP2/ERF domain 158 216 IPR036955 GO:0003700|GO:0006355
Pste2g02823 333 PRINTS Ethylene responsive element binding protein signature 181 197 IPR001471 GO:0003700|GO:0006355
Pste2g02823 333 PRINTS Ethylene responsive element binding protein signature 159 170 IPR001471 GO:0003700|GO:0006355
Pste2g02823 333 MobiDBLite consensus disorder prediction 271 302 - -
Pste2g02823 333 SUPERFAMILY DNA-binding domain 158 216 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02823 Pste-Chr2 28275934 28276935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02823 1 333 AP2-EREBP Transcription Factor Family AT1G78080 49.304 1.20e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste2g02823 AP2 4.6e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02823 2 28275934 28276935 Pste2g02823 2 28275934 28276935 ECH
Pste8g01865 8 13465647 13466603 Pste2g02823 2 28275934 28276935 PCT