Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02811 GACGAAACTTCTGGGTTGTTGTGTCCTTGACCGTCACAACCGCGTCACGTTATCATTGCTCTTCATCTCCGATTCTTTCTCTGCTAACACCCAACCATATGCTTTGACTTCAAATAACTCTTCCACGCACCTTCGTTCATTCTCTCTCTGCCATCAAAGTTCCAACCTTTGTCTGTTTTGGATGGATCTGATGCCTGTTTCGTTTTGTGGGCTGTCCCTCTCTCCTCCTTCTTTCGGATACTTGTCTAATTGAAACTTTTTCCATTTTCAATGTTATAGTCGAGTTATTTGCTCATTTTAGTTCTTCACTTTCGGATAAGGTTTGGCTTTGCTTATCTTATGCTCTTTTGGTGTCTTTGCAACTTTCAACAAGGGTCTTCTTAGATCCTTTCCCTGTGCTAAATTTTGCACCCATATCAATTATTTATCTTCTTTCAAGTCTGTCTATGAACGTACCTCTTAATATACAGAGAGGAAGTTTCTTCACCTTATTCTTTTTCTGTCAAGGAATCTTGTGACGGGTTCGATCAGGTGTTAAGTGTCTTGTGAGTTTTTCTGACACCGAGTTTTGCGCTAACACCTATACAGGTTACTGTTTATTGTATACACGGCATCTATAGTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTATAGGTTGCTTTTGTTTTTACGTCTGTGCTGGGAAATTCGAGTTTTTGTTTAACGATATATCACATTCCATCCATCTGTTGATAGTTTAAATGGTTTTTGGATTCTATCTTTGAGGGATCTTTGAGGTGTAAAGTTTTTTTATACAGAAGATATGTTTTCAGCTGAACCATCATCATCTTTGAGCTTTACATCGTCTTCCTATTTATCAAATGGTTCAGTTAGTCACAACATATACACTTCTTCTGGCTCTGACCCTGGACCTAACCTTGAGGTTATCAGTTTGAGTAAGCTTAGCTCCAATTTAGAGCAGCTTTTGATTGAACCTGATTGTGATTATAGTGACGCTGACATCATTGTGGAGGGAATTTCAGTTAGTGTTCATCGATGTATTCTGGCCTCCAGGAGTAAGTTTTTCCACGAACTATTCAAGAGAGAGAAAGGATCTTCAGAAAAAGAAGGGAAACTGAAGTATAACATGAGTGAATTGTTGCCTTATGGCAAGGTTGGATATGAAGCCTTCCTCATATTCCTTGGTTATGTATATACTAGTAAACTCAGGCCCTCTCCAATGGAGGTGTCTACTTGTGTTGACAATGTGTGTGCCCATGATGCTTGTAGACCAGCTATTAACTTTGCTGTGGAGTTGATGTATGCCTCTTCCATTTTTCAAATACCAGAGTTGGTATCACTTTTCCAGCGACGGTTACTTAACTTTATAGGAAAGGCTCTTGTGGAAGATGTCATTCCTATCCTCACTGTTGCTTACCATTGTCAATCAAATCAACTTGTCACTCAATGCATTGATAGGGTGGCCAGGTCAGACCTTGACCAGATTTCAATTGACAAAGAGCTTCCCCATGAACTGTCAGAAAAAGTTAAATTGCTCCGCCGCAACCCTCAACGAGAAGTTGAAAATGATGCTTCTGTAGTGGATGCTCTGTCTCTAAAACGAATCACTAGAATACACAAGGCATTGGACTCAGATGATGTTGAGCTTGTTAAACTTCTTTTAAATGAGTCAGACATTACTTTGGATGAGGCCAATGCTCTCCATTATGCTGCAGCCTACTGTGACCCCAAGGTTGTTTCTGAGGTGCTTGGTTTGGGACTGGCTAATCTCAATCTTCGAAATTCTCGGGGGTACACAGTTCTTCACATTGCTGCCATGCGTAAAGAGCCTTCCATTATAGTCTCCCTACTTACCAAAGGGGCTTGTGCATCAGATTTGACTTTTGATGGTCAGAGTGCTGTTAGTATTTGTAGGAGGTTGACTAGGCCAAAGGATTATCATGCAAAAACAGAGCAGGGGAAAGAAACAAACAAAGATCGGATATGCATAGATGTTCTTGAAAGAGAAATGCGGAGGAATCCAATGGCCGGGGATGCCTGTATCTCTTCCCATACAATGGCTGACGATATCCACATGAAACTACTGTACCTTGAAAACAGAGATATGACGTGTGGCTTTGAGATTGTGCAACTGGTTTACTATTTTTATGGTATATTTTATGCTCAAACCATGGAAAGTAAAATATTGCTCTCAACTGCAGTGGCATTTGCAAGACTTTTCTTCCCTTCGGAAGCCAAACTAGCCATGGACATTGCGCATGCTGAGACAACATCCGAGTTTGCTGGTCTCTCTGCATCCAACTCAAAAGGTTCAAATGGAAACTTAAGGGAGGTTGATCTCAATGAGACTCCCATAGTGCAAAATAAAAGACTTCTTTCTCGAATGGAAGCCCTTATGAAAACAGTGGAGATGGGGCGGCGGTACTTCCCGCATTGCTCGGAAGTGCTGGATAAGTTCATGGAGGATGACCTGCCAGACTTGTTCTACCTTGAAAAGGGTACTCATGAAGAGCAGAGAATAAAAAGGACGCGTTTCATGGAGCTGAAAGATGATGTCCACAAGGCTTTCAACAAGGACAAGGCTGAGTTTAGCCGCTCTGGTCTTTCATCTTCATCATCCTCATCATCCCTCAGAGATTCTGTTGTACATTACAAGGCTAGGAAAGTGTAATAACCAAGGCCTACATAGTGTTTTTGTCTTCATTTACAACATATTATTATATATAGTGCATATTCTAAAGTGATCCCCACCAACTCATCTGTAAAATTGTGAATGCAGGAAATCTGATGCCTTACTGTCTTGTGTAATCAGCACCCCCATATATTTTCAAATAATTTTATATGTTTTTTGGTGGAGAA 2860 0.4035 MFSAEPSSSLSFTSSSYLSNGSVSHNIYTSSGSDPGPNLEVISLSKLSSNLEQLLIEPDCDYSDADIIVEGISVSVHRCILASRSKFFHELFKREKGSSEKEGKLKYNMSELLPYGKVGYEAFLIFLGYVYTSKLRPSPMEVSTCVDNVCAHDACRPAINFAVELMYASSIFQIPELVSLFQRRLLNFIGKALVEDVIPILTVAYHCQSNQLVTQCIDRVARSDLDQISIDKELPHELSEKVKLLRRNPQREVENDASVVDALSLKRITRIHKALDSDDVELVKLLLNESDITLDEANALHYAAAYCDPKVVSEVLGLGLANLNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHAKTEQGKETNKDRICIDVLEREMRRNPMAGDACISSHTMADDIHMKLLYLENRDMTCGFEIVQLVYYFYGIFYAQTMESKILLSTAVAFARLFFPSEAKLAMDIAHAETTSEFAGLSASNSKGSNGNLREVDLNETPIVQNKRLLSRMEALMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTHEEQRIKRTRFMELKDDVHKAFNKDKAEFSRSGLSSSSSSSSLRDSVVHYKARKV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02811 622 Pfam Ankyrin repeats (3 copies) 272 354 IPR002110 GO:0005515
Pste2g02811 622 SUPERFAMILY Ankyrin repeat 259 372 IPR036770 -
Pste2g02811 622 ProSiteProfiles Ankyrin repeat region circular profile. 329 354 - -
Pste2g02811 622 Pfam BTB/POZ domain 61 178 IPR000210 GO:0005515
Pste2g02811 622 SMART BTB_4 63 189 IPR000210 GO:0005515
Pste2g02811 622 Gene3D - 263 403 IPR036770 -
Pste2g02811 622 ProSiteProfiles BTB domain profile. 63 139 IPR000210 GO:0005515
Pste2g02811 622 SUPERFAMILY POZ domain 48 188 IPR011333 -
Pste2g02811 622 ProSiteProfiles Ankyrin repeat profile. 329 354 IPR002110 GO:0005515
Pste2g02811 622 SMART ANK_2a 329 361 IPR002110 GO:0005515
Pste2g02811 622 SMART ANK_2a 295 325 IPR002110 GO:0005515
Pste2g02811 622 SMART ANK_2a 266 294 IPR002110 GO:0005515
Pste2g02811 622 FunFam regulatory protein NPR3-like 263 403 - -
Pste2g02811 622 Pfam NPR1/NIM1 like defence protein C terminal 462 608 IPR021094 -
Pste2g02811 622 Pfam NPR1/NIM1 like defence protein C terminal 371 433 IPR021094 -
Pste2g02811 622 FunFam Regulatory protein NPR3 37 221 - -
Pste2g02811 622 Gene3D Potassium Channel Kv1.1; Chain A 38 221 IPR011333 -
Pste2g02811 622 CDD BTB_POZ_NPR_plant 46 189 - -
Pste2g02811 622 PANTHER REGULATORY PROTEIN NPR3 9 433 IPR044292 GO:0009862|GO:2000022|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02811 Pste-Chr2 28119902 28124586 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste2g02811 NPR1_like_C 1.4e-66 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02811 2 28119902 28124586 Pste2g02811 2 28119902 28124586 ECH