Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02807 CTCCCTCCATTTCCTTCCTTCACCTTTCTTCCTTTCAGTAACCCTCGTCTCATTCCATTAATGGAAACCGGCGGTGGCGGAAGGCAACAAAGAGGTAACGACGGAAGAGGAATTCCACAAGCGCCATCGGAACCGAATCTGCCATCGGAACTGAGCAGGAGGTGGTTCTCCAACCACAATGGCGCCGATCCAGACCAACGCCATTTCTCTGGAACCATAATTACGGCGTTCCAAAACCTTGTGCCGTTGAAAGACGCGCTGATCCTAACGACCGTTGGAGACCTGCTTCTCCGTCTACATGCTCCTCTCATGTCAGCTTTAAACATGCACTATTCTCTAGTTCCCAAATTGGAAAAATTACAAATATCGAAACAGTTACCTGCATCAGCTTGTACCCTTGAAAAAAAGTATAGAATTTCACCTATTCACAGACCTGACAATGGTGGCACGTTGGCAATACTAACAAGCAGACTTCTTGTGAATCATTTTCCTGTCAAGTTTGATCCAGAGGGTATAATAATGCATTATAATGTTAGTGTCAAACCTAAGGTTTCTTCAAAATTTGGCCAGCCTCAGAAATTATCAAAGTCTGATCTATCCATGATCAGAGAGAAACTCTTTTCTGATGATCCTGAGAGGTTGCCCTTGGAGATGACTGCACATGATGGTGCAAAAAATATTTATAATGCAGTACAGTTACCAGAAGAGACCTTTACTGTGGAGATCTCTGAAGGAGAGGATGAAAAGATAATTTCATATAGTGTTACCTTAACTCTTATTAATAAACTCAGGTTTCGGAAGTTAATGGACTATCTTAGTGGGCATAAACTCTCCATTCCTGGGGATATTTTACAAGGGATGGATGTGGTGGTGAAAGAGAATCCAGCTAGACGCACTATTTCTGTAGGGCGACACTACTATCCAACAAATCCTCCCGTAGTCATGAAGGACCTTCACCACGGCATAATTGCTATTGGGGGGTTTCAGCATAGTTTAAAGCCTACATCTCAGGGTCTGTCCTTGTGTGTAGACTACTCAGTTTTGCCTTTCCGAAAGCAAATATCAGTCTTGGATTTCTTGCATGAGCGTATTAATAACTTTAAATTTGATGAATTTGAAAAATTCAGGAAATTCGTTGAGGATGCTCTTATTGGATTAAAAGATATTAGTCTTCTTGTCTTTTTTAAAGACAAATATGGCAAAGACATTGTGTACAAAAATATTCCTTGTCTAGATTTAGGGAAAGACAAGAAGAAGAACTATGTACCCATGGAATTCTGTGTTTTAGTTGAGGGCCAAAGATATCCCAAAGAGCGTCTGGATGGTATTTCTGCAAATACATTGAAAGCAATGTCACTGTCTCATCCAACTGAGAGGGAGAATGCAATACATAAGATGGTGCTGTCTAGTGATGGACCTTGTGGGACACATTTCTCACTTACAATGTCTTCATTTGACAGTGGTGATCTTATTCAAAATTTTGGAATGAGTGTCAACACAACCATGACAACTATTGTAGGACGTGTACTTGGTCCTCCAGAATTGAAGTTAGGAGATCCAAATGGAAAGATCATCAAGTTAACTGTGGATCTGGAGAAATGTCACTGGAATCTTGCTGGAAGATCAATGGTGGAAGGTAAACCAGTTGAGCATTGGGGAATTCTTGATTTCACTAGTTCTGGGCCATATAAGTACACACTAAGAAGCAAGGAATTCATTCAAAAGCTTATAGGTAAATACAAGAAATTGGGTATATACATGCAGGAGCCCATTTGGTACGAAGAATCTTCAATGAAGATAATTGGGAGTTATGATTTGCTATCTGAATTACTTGAAAAAATTAACAACATTTGTAAATATAACCAAGTCGACCTGCAATTTCTTCTGTGTGTAATGGCTAAAAAAAGTCCTGGTTATAAGTACCTCAAGTGGATTTCTGAGACCAAACTTGGGATAGTGACACAGTGCTGCTTGTCTAATAGTGCTAATGAAGGAGAGGACAAATTTTATACTAACCTGGCTCTCAAGATCAATGCCAAGCTTGGAGGCAGTAACGTGGAGCTCAGTAATGGACTCCCTTACTTTGAAGGTGAAGGACATGTTATGTTTTTAGGGGCTGATGTCAACCATCCTGGTTATCAAGACAACAGGAGTCCATCATTTGCTGCTGTGGTTGCTACTGTTAATTGGCCCGCTGCAAATCGATATGCAGCACGTGTTTTCCCACAATACAATCGAAGTGAGAAAATATTGAACTTCGGCGATGTTTGTCTTGAGCTTGTTGCATGCTATAGGAGGATGAATGGAGTTAGGCCAGAAAGAATTGTTATTTTTCGTGATGGAGTTAGTGAGTACCAGTTTGACATGGTTCTTAATGAAGAGCTGCTAGATTTGAAGAGAGTATTTCAAAGAGAAACTTACTTTCCAACAATCACTCTTATTGTAGCACAAAAACGACATCAAACTCGACTTTTTCCAGAGGGTTGGAGGGATGGGTCTTCCAGTGGCAATATTTTGCCGGGAACAGTTGTGGACACAAAAGTTATACACCCTTTTGAGTTTGACTTCTACCTTTGCAGTTACTACGGAAACTTAGGTACAAGCAAGCCTACTCATTACCATGTCTTATGGGATGAGCACAAGTTTACATCTGATAAATTACAGAAGCTCATATACGAGATGTGCTTCACCTTTGCAAAGTGCACTAAACCTGTATCGTTAGTCCCTCCTGTGTATTATGCTGACCTTGCTGCTATAGAGGACGACTATACCATGAAGCAAGGATTGGGATGCAATCTCCAAAGTCAACAGCATCTTCATCATCCAAAGATACCTCATCAGTTTCACGAACTGCTTCATGTGAACATGGATTTTACACGCTGCATGCTGACCTGGAAAACAGAATGTTCTTCATCTAAAGGACTTGTTCACTCTTCCGGAAGTTGGGGAAAGCTTATAACTTCTATCCTGTTTACACGTGTATTGCATATTTTGCTTTTTTTGGCTCAATAG 3012 0.4054 METGGGGRQQRGNDGRGIPQAPSEPNLPSELSRRWFSNHNGADPDQRHFSGTIITAFQNLVPLKDALILTTVGDLLLRLHAPLMSALNMHYSLVPKLEKLQISKQLPASACTLEKKYRISPIHRPDNGGTLAILTSRLLVNHFPVKFDPEGIIMHYNVSVKPKVSSKFGQPQKLSKSDLSMIREKLFSDDPERLPLEMTAHDGAKNIYNAVQLPEETFTVEISEGEDEKIISYSVTLTLINKLRFRKLMDYLSGHKLSIPGDILQGMDVVVKENPARRTISVGRHYYPTNPPVVMKDLHHGIIAIGGFQHSLKPTSQGLSLCVDYSVLPFRKQISVLDFLHERINNFKFDEFEKFRKFVEDALIGLKDISLLVFFKDKYGKDIVYKNIPCLDLGKDKKKNYVPMEFCVLVEGQRYPKERLDGISANTLKAMSLSHPTERENAIHKMVLSSDGPCGTHFSLTMSSFDSGDLIQNFGMSVNTTMTTIVGRVLGPPELKLGDPNGKIIKLTVDLEKCHWNLAGRSMVEGKPVEHWGILDFTSSGPYKYTLRSKEFIQKLIGKYKKLGIYMQEPIWYEESSMKIIGSYDLLSELLEKINNICKYNQVDLQFLLCVMAKKSPGYKYLKWISETKLGIVTQCCLSNSANEGEDKFYTNLALKINAKLGGSNVELSNGLPYFEGEGHVMFLGADVNHPGYQDNRSPSFAAVVATVNWPAANRYAARVFPQYNRSEKILNFGDVCLELVACYRRMNGVRPERIVIFRDGVSEYQFDMVLNEELLDLKRVFQRETYFPTITLIVAQKRHQTRLFPEGWRDGSSSGNILPGTVVDTKVIHPFEFDFYLCSYYGNLGTSKPTHYHVLWDEHKFTSDKLQKLIYEMCFTFAKCTKPVSLVPPVYYADLAAIEDDYTMKQGLGCNLQSQQHLHHPKIPHQFHELLHVNMDFTRCMLTWKTECSSSKGLVHSSGSWGKLITSILFTRVLHILLFLAQ 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02807 983 Gene3D - 677 942 IPR036397 GO:0003676
Pste2g02807 983 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 137 901 - -
Pste2g02807 983 SMART Piwi_a_2 607 906 IPR003165 GO:0003676
Pste2g02807 983 MobiDBLite consensus disorder prediction 1 42 - -
Pste2g02807 983 Pfam Argonaute linker 2 domain 438 496 IPR032472 -
Pste2g02807 983 SUPERFAMILY Ribonuclease H-like 593 898 IPR012337 -
Pste2g02807 983 SMART DUF1785_2 280 333 IPR014811 -
Pste2g02807 983 Gene3D - 489 669 - -
Pste2g02807 983 ProSiteProfiles PAZ domain profile. 358 411 IPR003100 GO:0005515
Pste2g02807 983 SUPERFAMILY PAZ domain 331 447 IPR036085 GO:0005515
Pste2g02807 983 ProSiteProfiles Piwi domain profile. 607 906 IPR003165 GO:0003676
Pste2g02807 983 CDD PAZ_argonaute_like 343 410 - -
Pste2g02807 983 Pfam N-terminal domain of argonaute 137 271 IPR032474 -
Pste2g02807 983 Pfam Argonaute linker 1 domain 281 332 IPR014811 -
Pste2g02807 983 Gene3D paz domain 306 415 - -
Pste2g02807 983 CDD Piwi_ago-like 471 898 IPR045246 -
Pste2g02807 983 Pfam Piwi domain 608 898 IPR003165 GO:0003676
Pste2g02807 983 Pfam PAZ domain 367 425 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02807 Pste-Chr2 28099190 28104061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02807 124 906 Eukaryotic Initiation Factors Gene Family AT5G43810 32.326 2.01e-123 398