Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02789 AGTGGCAAGACTCTGAGTTCTACTTCAAGTTGGTAATGGGTGAAAGAATACTGATACCACTGTTGCTTTCCTTCAACTGTTTGTTGTTTGCACTAGCACAAGATGCTACCAATGATTTTGCAGTCCTAAAGTCTCTAAGGGATTCTTGGCAAAGCCAAACTCTAAACTGGGAGGGTTCAGATCCTTGCAATGGATGGGATGGAATTAAGTGCAACAAAAACTCACGTGTTATTTCCATATCATTAACAGATATTGGTTTGACCGGCCAGCTTTCAGGAGACATTGGATCCCTTTCTGAATTGACGAATCTGGATCTCTCATACAATAGGGGCCTAACAGGACCACTTCCCTCAGAAATTGGAAAGTTGAAGAAGCTATCAAGATTAATTCTTGTTAGTTGTGGTTTTACTGGTCGTATTCCAGATGAAATAGGATCTCTACAACAGCTTGAATTCTTATCTTTAAACTCCAACAATTTTGTTGGACCAATTCCACCTTCTACTGGTAACCTGTCAAATCTTACATGGCTTGATTTAGATGACAATCATCTTAATGGATCCATCCCAGTATCTAGTGGAACTACTCCCGGTCTTGATATGTTACACAATGCGCTGCACTTGTACTTCAATTCTCTTCAGCTGCCAGTTTTTCTTCATCTTGGGAAGAATAGGCTTTCAGGAGAAATTCCTCCGAAACTTTTTAGCTCAAAAATGACTCTCATACATGTGATTTTTGACAGCAATAAACTAGTTGGCAGCATTCCTGGAACAATTGGACTTGTTAAGAGTCTGACGGCAGTGCGATTTGAAAATAATTCATTGGATGGAAATGTGCCTCAGACCTTCAACAACCTCATTCATGTCACAGACCTGTTGTTGTCCAACAATAAGCTGCAAGGTCCCCTGCCAAACCTTACTGGGATGAGCTCCCTACAATACTTGGATTTGAGCAACAATAGCTTTGATGAGTCGAGTTTTCCACTTTGGCTTTCAAATCTGAAGAATTTAACAACATTACAAATGGAGAGTGTGAACCTCAATGGAAACATTCCGATTTCTTTATTTAGCCTTGCCTATTTACAAAATGTTGTGCTTAGAAACAACAACCATATTAGTGGAACCTTGGATATCGGCTCCAACTACAGCAATCACCTGAAACTTCTTGATTTGAAATCAAATTCAATTCTGGACTTCAAGCAACGAAATGATCAGCTGGAGGGTATCACGATAATACTTGTGGCCAACCCGATTTGCACAGAAACAGGAGCTATGCAGGAGGGCTACTGCAACATGCACAATATTATCTCCGATACAAAACCACAAAATAAATGTACATTCGGTACTTGCAGTCCAGATCAGATTCTCAGTCCCAAGTGCAAATGTGGATATCCATATACAGGAACTTTAACTTGCAGGGTACCTTCATTTCTTGAAGGGAGAAATATATCATCCCTGGAGGAAGATCTTACGCATCAACTTCAATCTAATAATCTACCTGTGGATGCAGTTTCTTTAGTCATACTAGATCCATTAAGTATGTTAGAGTTTATCATACAAATTTTCCCACAAGGTCAAGATCATTTCAAACAAGAAGACATATCTAGGATAAGCTTATTTATGGGAAACCTAAGTGCTACTAGTGCATTTAATTTTATTACGGGAAACCAAGGTGATGATGATATTACACTACTAAGTACTAACTTATTCACCCTAGTTTCTAGAGACAGAAATAATAATACTAATTTGTCTATCTTTTGTCATAATAAAGGAGGACCTAAGGATTCGCGGAATTCATCAAGCACTGCCATAATTATTGGAGCAGCAGTTGGTGTTTATGCTTTCCACCAGAAAAGACGAGCAGAAAGAGCAATTTCTAGAAGCAATCCTTTTGGAAACTGGGATCCAAATAAAAGCAACTGTGGCACCCCTCAGCTAAAAGCAGCAAGGCAGTTTTCTTTTAAAGAAATTAAAAAATACACAAACAACTTCTCACCAGACAATGATATTGGATCAGGGGGTTATGGAAAGGTTTATCGGGGAACGCTTCCCAGTGGTCAAGTGGTAGCCATAAAACGAGCTCAAAAAGAATCAAAGCAGGGAGCACCAGAATTTAAAGCTGAAATTGAACTCCTTTCAAGGGTCCACCACAAGAATCTGGTCAGCCTAGTGGGATTCTGCTTTGAACGAGAGGAACAAATGCTGGTATATGAGTTTGTATCAAATGGAACTTTGAAGGATGCTCTCACAGGGAAATCTGGAATTTTGTTGAGCTGGAGTAGAAGGCTGAAAGTAGCCCTTGGTGCTGCCAGGGGTTTGGCTTATCTTCATGAACATGCCGACCCCCCTATTATACACAGGGACATCAAATCAAACAACATTTTGCTGGATGAGAACTACACTGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCTATCTTAGATGATGAAAAAGATCATGTCACCACTCAAGTTAAAGGAACAATGGGCTACTTGGATCCAGATTATTATACTAGTCAGCAGTTGACTGAAAAAAGTGATGTCTATAGTTTTGGAGTGCTAATGTTGGAGCTGATTACTGCAAAAAAGCCAATAGAACGAGGGAAATTCATTGTAAAAGAGGTCAGGAGTACAATAGATAAGACAAAAGAGTTGTATCATCTTCACGAAATTCTTGACCCGGCCATCTGTTCAGGATCATCACTGGAGGGTTTTGAGAAGTTTGTGGACCTTGCAATGGAGTGCGTTGAAGATTCAGGGGTCAACAGGCCCTCAATGAGTGATGTAGTTAAAGAAATTGAAGACATGTTGCGGTCCGTTGGTTTGCACCTAACATCTGAATCAGTAACGTCCACTTCATCTAGTTATAGATATCAGGAGGTAATTACAGTGAGTTCTCATCAGGACCATCCTTGCAGCAATGAGTCCTTTGCTTCAAGTGCAGAACATTTATATTCAAAAAATGAGCCTAGTTAAGTTAGTCTTTTCTCAATTATAAAGTCGAGAGACTTGTTTTATTAGTATTTAATATTTATTGTCAAAAAACAG 3044 0.3939 MGERILIPLLLSFNCLLFALAQDATNDFAVLKSLRDSWQSQTLNWEGSDPCNGWDGIKCNKNSRVISISLTDIGLTGQLSGDIGSLSELTNLDLSYNRGLTGPLPSEIGKLKKLSRLILVSCGFTGRIPDEIGSLQQLEFLSLNSNNFVGPIPPSTGNLSNLTWLDLDDNHLNGSIPVSSGTTPGLDMLHNALHLYFNSLQLPVFLHLGKNRLSGEIPPKLFSSKMTLIHVIFDSNKLVGSIPGTIGLVKSLTAVRFENNSLDGNVPQTFNNLIHVTDLLLSNNKLQGPLPNLTGMSSLQYLDLSNNSFDESSFPLWLSNLKNLTTLQMESVNLNGNIPISLFSLAYLQNVVLRNNNHISGTLDIGSNYSNHLKLLDLKSNSILDFKQRNDQLEGITIILVANPICTETGAMQEGYCNMHNIISDTKPQNKCTFGTCSPDQILSPKCKCGYPYTGTLTCRVPSFLEGRNISSLEEDLTHQLQSNNLPVDAVSLVILDPLSMLEFIIQIFPQGQDHFKQEDISRISLFMGNLSATSAFNFITGNQGDDDITLLSTNLFTLVSRDRNNNTNLSIFCHNKGGPKDSRNSSSTAIIIGAAVGVYAFHQKRRAERAISRSNPFGNWDPNKSNCGTPQLKAARQFSFKEIKKYTNNFSPDNDIGSGGYGKVYRGTLPSGQVVAIKRAQKESKQGAPEFKAEIELLSRVHHKNLVSLVGFCFEREEQMLVYEFVSNGTLKDALTGKSGILLSWSRRLKVALGAARGLAYLHEHADPPIIHRDIKSNNILLDENYTAKVADFGLSKSILDDEKDHVTTQVKGTMGYLDPDYYTSQQLTEKSDVYSFGVLMLELITAKKPIERGKFIVKEVRSTIDKTKELYHLHEILDPAICSGSSLEGFEKFVDLAMECVEDSGVNRPSMSDVVKEIEDMLRSVGLHLTSESVTSTSSSYRYQEVITVSSHQDHPCSNESFASSAEHLYSKNEPS 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02789 978 SUPERFAMILY L domain-like 37 390 - -
Pste2g02789 978 Gene3D Ribonuclease Inhibitor 17 188 IPR032675 -
Pste2g02789 978 SUPERFAMILY Protein kinase-like (PK-like) 637 943 IPR011009 -
Pste2g02789 978 FunFam Leucine-rich repeat family protein 26 181 - -
Pste2g02789 978 Gene3D Phosphorylase Kinase; domain 1 622 726 - -
Pste2g02789 978 Gene3D Transferase(Phosphotransferase) domain 1 727 940 - -
Pste2g02789 978 CDD STKc_IRAK 657 923 - -
Pste2g02789 978 ProSiteProfiles Protein kinase domain profile. 651 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02789 978 ProSitePatterns Protein kinases ATP-binding region signature. 657 679 IPR017441 GO:0005524
Pste2g02789 978 SMART serkin_6 651 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02789 978 MobiDBLite consensus disorder prediction 954 978 - -
Pste2g02789 978 FunFam Leucine-rich repeat protein kinase family protein 620 726 - -
Pste2g02789 978 Gene3D Ribonuclease Inhibitor 189 395 IPR032675 -
Pste2g02789 978 FunFam Leucine-rich repeat protein kinase family protein 182 292 - -
Pste2g02789 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 771 783 IPR008271 GO:0004672|GO:0006468
Pste2g02789 978 Pfam Protein tyrosine and serine/threonine kinase 655 919 IPR001245 GO:0004672|GO:0006468
Pste2g02789 978 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 727 936 - -
Pste2g02789 978 PANTHER RECEPTOR-LIKE PROTEIN 55 33 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02789 Pste-Chr2 27917751 27924303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02789 2 977 Receptor kinase-like Gene Family AT5G49760 48.936 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pste2g02789 PK_Tyr_Ser-Thr 1.1e-48 CL0016