Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02741 ATGGGAAGATCGCCATGCTGCGATGAGAATGGCCTTAAGAAAGGTCCCTGGACTCCCGAAGAAGATGAAAAGCTAGTCCAGCACATTCAGAAACATGGCCATGGAAGTTGGAGAGCTCTACCTAAGCTTGCTGGTCTCAACAGATGTGGAAAAAGTTGTAGGCTAAGGTGGACTAACTATTTAAGGCCTGATATCAAGCGGGGAAAATTTTCTCAAGAAGAGGAGCAAACAATTCTGCATCTTCATTCCATCCTTGGGAACAAATGGTCAGCAATTGCAACCCACCTTCCAGGCAGGACGGACAATGAGATAAAGAATTTCTGGAACACTCATTTAAAGAAAAAGTTGATTCAGATGGGTTTCGATCCAATGACTCACCAGCCTAGAACTGACCTTGTTTGCAGCTTGCCATATCTGCTAGCATTGGCCAACATGACAGACCTTCTAGATCATCAGTCATTGGATGAACATGCAATAAGGTTGCAAGAAGAGGCAGTCCAGTTGGCAAAGTTTCAATGCCTTCATTATCTAATCCAATCCTCAAACTCCTTAAGCAGTAGCACCAACTCCTATGACCAAAGTGCCACCACAAACAACATGGAGCCTTTCAGTTTGTTAAACTCAATGTCCAATGTGAAAGAGAATCCAATCATGTTGCAACCAGATACTCCTGCCTCATTTTCTCATGGCATTGCTAGCTCCCAACCACTCCACCACCCAAACGAGCTACCTCACCTTTTAGACCCACAAGTCTCTTTCAGTTCCCAATCATGTTTGAATAGTGAGACGGGTCAAGTTACTGACTATGCAATGATAAGTCAAGGGGATCACACGGTTGATCATGACTCTTCATGGATTATTCCATCTATTCCTCCAAATGCAATCGGGTCCTCGTTAGGTGATGCTAGCAGCACTACTTCTAGCTATGGAGGAGGACCCTCATCTTATTGGTCTGAACTATTTTTTGAGGACCCCATCCTGCTGCATCACCTATCTTAG 999 0.4434 MGRSPCCDENGLKKGPWTPEEDEKLVQHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVCSLPYLLALANMTDLLDHQSLDEHAIRLQEEAVQLAKFQCLHYLIQSSNSLSSSTNSYDQSATTNNMEPFSLLNSMSNVKENPIMLQPDTPASFSHGIASSQPLHHPNELPHLLDPQVSFSSQSCLNSETGQVTDYAMISQGDHTVDHDSSWIIPSIPPNAIGSSLGDASSTTSSYGGGPSSYWSELFFEDPILLHHLS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02741 332 FunFam MYB-related transcription factor 13 66 - -
Pste2g02741 332 CDD SANT 69 112 IPR001005 -
Pste2g02741 332 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pste2g02741 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste2g02741 332 MobiDBLite consensus disorder prediction 216 246 - -
Pste2g02741 332 CDD SANT 16 61 IPR001005 -
Pste2g02741 332 Gene3D - 69 116 - -
Pste2g02741 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 244 - -
Pste2g02741 332 Gene3D - 13 66 - -
Pste2g02741 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste2g02741 332 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste2g02741 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste2g02741 332 SMART sant 13 63 IPR001005 -
Pste2g02741 332 SMART sant 66 114 IPR001005 -
Pste2g02741 332 FunFam Transcription factor MYB39 69 130 - -
Pste2g02741 332 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste2g02741 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02741 Pste-Chr2 27586819 27588101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02741 1 327 MYB Transcription Factor Family AT1G34670 54.918 3.71e-115 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste2g02741 Myb_DNA-binding 4.9e-17 CL0123