Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02696 TTTTTTTTTTTTTTTTTTTTTTTACCACTGTTTTATGGACCTCTTCGCCGCCGACCACTTCCCCGTCCCCGACCACGTGGCTCCGTTCCCCGATTCCGGCGACCTCCTCTTCGCCGCTGACCTCCTCTCTCACCGCCACAACCCCCAGAAGCTCCGCCCCATCAGGTCCGTCCCCACCACCGTCAATGCCACCCCTCCTCCTCCCCCTCCCATGCAGGATCCGGTTCCTTCCGGGTCGGGTCACGCCCCGTGCCGCGAATCCAGCTCATCTTTGGATGCAGAAGATGAAGATGAAGATGACGACAATTCATCAGCAAGTACTGAAGAAGTTGGCCCTAGAAAGAGGAGGAGAAAAACGGTGAGAAAGCTTGAAGATTTTGTGAAGGATTTGGTGACTAAGGTGATGGAAAAGCAAGAGCAGATGCACAAGCAGTTGGTGGAAATCATAGAAAACAAGGAAAGGGAAAGAATAAAGAGAGAAGAAGCTTGGAAGAATGAGGAGATGGAGAGAATTAGAAAAGATGAAGAGGCTAGAGCCCAAGAAAAATCTCGCAATTTGGCCCTCATATCCTTCATTCAGAACCTGTTAGGCCATGAAATCCAAATTCCTCAACCAGTAGAACCATGTGGCAAAGGAGAAGAAGATGAAGTTGCCGTGAATGCTCAAAAGGATTTGAACAGTGATCCAAGTAACAACAGATGGCCTGATGTTGAAGTGCAGGCACTCATCTCTGTGAGAACTTCATTGGAACACAAGTTTCGTGTAATGGGATCAAAAGGGTCAATATGGGAGGAGATATCTCAAGCGATGAATGGCATAGGATACAACCGATCTGCAAAAAAGTGCAAGGAGAAGTGGGAAAACATCAACAAGTACTATAAAAGGACAATAGGGAGTGGCAAGAAACGGCGTCAAAATAGTAAAACTTGCCCTTACTTTGACGAGTTGGACATTCTGTATAGAAATGGCCTCCTAAGTATTGGGAGCAATACCAGCGATGCTCCCCATATTGAAGAAAAGGAGTAGTGAAACATGAATACCACTTGATAGTCATAGATACAGCTCATGTAAAACTTCATTCACTTCAGCATTTTGCTATTCTTATTTTAAATTTCCTAGCAGATCACTTTAGTGGACAATATTTC 1146 0.4529 MDLFAADHFPVPDHVAPFPDSGDLLFAADLLSHRHNPQKLRPIRSVPTTVNATPPPPPPMQDPVPSGSGHAPCRESSSSLDAEDEDEDDDNSSASTEEVGPRKRRRKTVRKLEDFVKDLVTKVMEKQEQMHKQLVEIIENKERERIKREEAWKNEEMERIRKDEEARAQEKSRNLALISFIQNLLGHEIQIPQPVEPCGKGEEDEVAVNAQKDLNSDPSNNRWPDVEVQALISVRTSLEHKFRVMGSKGSIWEEISQAMNGIGYNRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKTCPYFDELDILYRNGLLSIGSNTSDAPHIEEKE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02696 330 ProSiteProfiles Myb-like domain profile. 215 279 IPR001005 -
Pste2g02696 330 MobiDBLite consensus disorder prediction 49 65 - -
Pste2g02696 330 PANTHER FI21293P1 62 321 - -
Pste2g02696 330 Gene3D - 223 284 - -
Pste2g02696 330 MobiDBLite consensus disorder prediction 37 108 - -
Pste2g02696 330 Coils Coil 124 144 - -
Pste2g02696 330 FunFam Trihelix transcription factor GT-2 223 284 - -
Pste2g02696 330 Coils Coil 154 174 - -
Pste2g02696 330 CDD GT1 221 285 - -
Pste2g02696 330 Pfam Myb/SANT-like DNA-binding domain 221 306 IPR044822 -
Pste2g02696 330 SMART sant 219 281 IPR001005 -
Pste2g02696 330 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02696 Pste-Chr2 27116457 27118459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02696 103 311 Trihelix Transcription Factor Family AT5G47660 47.368 7.92e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste2g02696 Myb_DNA-bind_4 3e-21 CL0123