Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02693 ATGGCTGAGTCGGACAACGAGTCAGGAGGTCAAACGGGTAACGGAGGTTGTAGAGAGCAAGACAGATTCCTGCCCATAGCGAACGTGAGCAGAATCATGAAGAAGGCTTTACCGGCGAACGCGAAGATCTCAAAGGAGGCAAAAGAAACAGTGCAGGAGTGTGTGTCGGAGTTCATCAGCTTCATAACCGGGGAGGCGTCCGATAAGTGCCAGAAGGAGAAGAGAAAGACCATCAACGGTGACGATCTGCTCTGGGCGATGACCACACTGGGCTTCGAGGAGTATGTGGACCCTCTCAAGATTTACCTGCAAAAGTATCGTGAGATGGAGGGGGAGAGAACTGCTATGATGGGAAGGCCTCAGGGGGATCAGAGGGACGAGGCTTATGCCCATGCCCATGCCCATGCCCATGCCCATGCCCATATGATGATCATGATGGGCCATCAGGGACACATCTATGGATCTACCGCTTCACCCTCTTCTGCAACAACTCATAGATAG 501 0.5269 MAESDNESGGQTGNGGCREQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVDPLKIYLQKYREMEGERTAMMGRPQGDQRDEAYAHAHAHAHAHAHMMIMMGHQGHIYGSTASPSSATTHR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02693 166 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 6 137 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pste2g02693 166 MobiDBLite consensus disorder prediction 1 15 - -
Pste2g02693 166 MobiDBLite consensus disorder prediction 1 20 - -
Pste2g02693 166 ProSitePatterns NF-YB/HAP3 subunit signature. 54 70 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pste2g02693 166 SUPERFAMILY Histone-fold 20 129 IPR009072 GO:0046982
Pste2g02693 166 PRINTS CCAAT-binding transcription factor subunit A signature 51 69 - -
Pste2g02693 166 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Pste2g02693 166 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Pste2g02693 166 Gene3D Histone, subunit A 13 145 IPR009072 GO:0046982
Pste2g02693 166 FunFam Nuclear transcription factor Y subunit B-3 12 138 - -
Pste2g02693 166 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02693 Pste-Chr2 27103923 27104423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02693 1 124 CCAAT-HAP3 Transcription Factor Family AT4G14540 83.333 3.32e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pste2g02693 CBFD_NFYB_HMF 1.1e-27 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02693 2 27103923 27104423 Pste2g02693 2 27103923 27104423 ECH