Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02689 TCTGAGATAGCTAAGATAGATCGCAGGAGAGATGGTCTTGGAGATCTTCGAGTCCTTCATGACGAAATACTCTGCTCTATTCTGGAACGTCTCACTCCCCGAGATGCTGCTCGCGTCGCTTGCGTTAGCAGTGTGATGTACATACTGTGCAATGAAGAACCTCTGTGGCTGACTCTGTGCTTAAAAGGAGCATCTGGTTTGCTTCAATACAAAGGCTCTTGGAAGAAAACTGCCCTGCATAATGAGAATCTGCCAGACAAATACAAAGAGTACTATCGAGGCCCTCTACATTTTGACGGGTTCAATTCTTTATTTTTGTACAGGCGATTATACCGCTGCCATACCACGTTGGATGCATTTTATGCAGATACAGGAAATGTAGAAAGAATAAAAGACATCTCACTGAAGGACTTCTATAACCAGTATGATGCGAAGAAACCGGTTATACTCACTGGATTGGCTGATACATGGCCTGCCAGGCATAAATGGACAACTGATCAGCTGTTGCTAAACTATGGAGATGTAGCATTTAAAATTTCTCAAAGGAGTTCCCGGAAAGTCTCTATGAAGTTGAAAGATTATGTATCTTACATTAAAGTTCAACATGATGAAGATCCCTTGTATATTTTTGATGAAAAGTTTGGTGAAGCGGCACCTAGCTTGTTGAAGGATTATTGTGTGCCTCATCTTTTTCAAGAAGACTTCTTTGATATCTTAGATACAGATAAACGACCATCCTATAGGTGGCTCATAATTGGACCAGACAGATCTGGTGCCTCTTGGCATGTTGATCCAGCTCTTACCAGTGCATGGAATACTCTTCTCTGTGGCCGTAAAAGGTGGGCGTTATATCCTCCTGGAAAAGTTCCTTTGGGTGTGACAGTGCATGTTAACGACGAAGATGACTTTTATCCTCTTCTTGCTGATGAAGACAAGCCAATTGAGTGTACACAACTACCTGGAGAAACAATTTATGTTCCGAGTGGGTGGTGGCACTGTGTGCTAAATTTGGAAACAACTATTGCTGTCACACAGAATTTTGTGAATTCCAACAACTTTGAATTTGTATGTTTGGATATGGCACCTGGTTATCGACATAAAGGAGTTTGCCGTGTTGGGTTGCTTGCTCTTGATGATGATAGTTATGAAAATGTCAGACAGAGTGAGTCATGTAATGAAAAGGACTCAAGTTATTCTGATTTATCAAGGAAAGAGAAAAGAGCCAAAACTCAGAAAGATGTAGATGATGTATGTTATGAAAGATTCATGGATGATGTATCCAGAAGCTATAATTTATGGAAAGATGGATTTTCCTATAATATAAACTTCTTATCCATGTTTTTGGATAAAGACAGAGACCACTACAGTTCACCGTGGAGCTCAGGCAACAGCATTGGTCAGAGAGAACTAAGAGAATGGCTATCCAAGCTCTGGATTCAAAAACCAAAAATGAGAGAGCTAATATGGAAGGGAGCATGTATTGCACTAAATGCCGACAAGTGGTTAGAATGCCTATCAAATATTTGCACCTTCCATAATTTGCCCCTTCCCACTGATGATGAAAGGCTTCCAGTTGGTACGGGTAGCAATCCT 1593 0.4087 SEIAKIDRRRDGLGDLRVLHDEILCSILERLTPRDAARVACVSSVMYILCNEEPLWLTLCLKGASGLLQYKGSWKKTALHNENLPDKYKEYYRGPLHFDGFNSLFLYRRLYRCHTTLDAFYADTGNVERIKDISLKDFYNQYDAKKPVILTGLADTWPARHKWTTDQLLLNYGDVAFKISQRSSRKVSMKLKDYVSYIKVQHDEDPLYIFDEKFGEAAPSLLKDYCVPHLFQEDFFDILDTDKRPSYRWLIIGPDRSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNDEDDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSNNFEFVCLDMAPGYRHKGVCRVGLLALDDDSYENVRQSESCNEKDSSYSDLSRKEKRAKTQKDVDDVCYERFMDDVSRSYNLWKDGFSYNINFLSMFLDKDRDHYSSPWSSGNSIGQRELREWLSKLWIQKPKMRELIWKGACIALNADKWLECLSNICTFHNLPLPTDDERLPVGTGSNP 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02689 531 SUPERFAMILY F-box domain 8 67 IPR036047 GO:0005515
Pste2g02689 531 SMART cupin_9 211 359 IPR003347 -
Pste2g02689 531 ProSiteProfiles JmjC domain profile. 216 364 IPR003347 -
Pste2g02689 531 FunFam F-box protein At1g78280 107 349 - -
Pste2g02689 531 Gene3D - 8 90 - -
Pste2g02689 531 Pfam F-box-like 21 62 IPR001810 GO:0005515
Pste2g02689 531 Pfam Cupin-like domain 143 351 IPR041667 -
Pste2g02689 531 Gene3D Cupin 111 349 - -
Pste2g02689 531 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 13 526 - -
Pste2g02689 531 SUPERFAMILY Clavaminate synthase-like 120 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02689 Pste-Chr2 27079460 27083478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02689 1 531 Glycosyltransferase AT1G78280 67.336 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pste2g02689 Cupin_8 1.5e-19 CL0029