Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02676 CAAACTCAACTTGGTTTGATCCTATGCCACGCAAAAACATCATCGGTTGTCGCAGTTTTTTTGCCCCTCATTTTTTCTTTTTCACGGCATTTTAGCGCGCAATACCAAATTCACATCTAAATCCTCACTGGCAACGATAAAGCTTCAATTTTTGTATAAATTCGAGTGACCCAACTGCGCTGTCTCTCAATTCTAGCTCTGAAAATCTAGGGTTTTTTTATCTTTAAAAAAAATAATTATCGCTGCCCTTTTCTTCAATCGTGATCCTGCGCCTCAACAAGCTCAAATTCATTGAGTGGTTCACGCAGAGAGCCAATGGGTCGCTCTCGTGGGAATTTTCACCACGCCGACGAAGACCCTAACCAGAGGTCAAGGAGAAAAAAGAATGCTGCTAGTGGAGAAAATTCGGAATCTGGTGCTGCAGGCCAAGGAGCAGGTGAAGGGAAGAAGGCTCTGTACCACTGCAATTATTGTAATAAAGATATAACAGGAAAAATCCGTATTAAGTGTGCCATGTGCCCAGATTTTGACTTGTGTATAGAGTGCTTTTCTGTTGGAGCTGAGGTGACACCTCATAAAAGCAACCACCCTTACAGGGTTATGGATAATTTGTCTTTCCCTCTTATTTGCCCTGACTGGAATGCAGATGATGAAATTTTACTTCTAGAGGGAATTGAAATGTATGGCTTGGGAAACTGGACAGAAGTTGCTGAGCATGTCGGAACCAAAAACAAAGAGTCATGCATAGAACACTATAGGAATGTGTACCTGAACTCCCCATTCTTTCCTGTTCCGGACATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCAAAAGGGCAGGGTGAAGACAAGAAAGTGGTGATTGTTGCAGGAATTTCCATGGCAGATCTTAGTATAAAGGCAGAATCTTCCTTTTCTCCATCTAGAGCCAAGGTTGAAGATTCCCATAAAGCTGGCTCCACTAACCGATTACCTTCCACTTTGAATCCAGCTGCAGAATCAGATTCTGGCCCTTCAGGTAATGCACATACTGCAGCTGGTGCTAACCAAAAGGCATCTAATGTGGGCCGGGGAAAAGGTGGTCCAGGAATTGTTAAAATGGAAGATTCTCAAGTAGACAGAGATTTTGGAGGAAAGAAACCAACTTCCTCAGGAAATGAAGGTCCTTCTTTAGTAGAATCAAGTGGTTATAACTCCAAAAGACAGGAATTTGATCCTGAATATGATAATGATGCTGAACAACTACTTGCTGAAATGGAATTTAAGGACACTGACACTGAGGAAGAGCGAGAGCTCAAACTACGTGTGTTGCGTTTCTATTCAAAAAGGCTAGATGAAAGAAAGCGTAGGAAAGATTTCATACTTGAAAGAAATTTGTTATACCCAAATCCATTTGAGAAGGATTTAACACCTGAGGAGAAGGCAATATGTCGGAAATATGACTTATTCATGCGCTTTCATTCTAAGGAGGATCATGAGGAATTGCTTAGAACAGTTATTGCGGAACATAGAACTCGGAAACGACTTCAAGAGCTTAAGGAAGCCCGGGCTGCTGGTTGCCGCAATTCTGCTGAAGCTGATAGATATCTGGCACAGAGGAGAAGAAGGGAAGCAGAAGAAAGTGCTCGAAGGACAAAAGAAAGTGCTCAGGTTGGCCCAAGCAATCAGGGGATTACAAATGTGATGATGTCTCCGGACTCAGCGGGCAAGGATTTGAGTGCAAGACCTGCAGGACCTGCTACCTCTAGTTCTGTCAATGAAATAGATGTGATGGGATACTATGGAGCTGATTTACTTTCTGAACCGGAGAAACGTTTATGTTGTGAGCTAAGGTTGCCTCCAGCCATATATCTAAAGATGCAAGAGCAACTGTCTCTACAAATACTTGCTGGAACTGTCTCTTCAAAATCAGATGCTCATCAATTGTTCAAGATCGATGCCATGAAAATTGATAGGGTGTACGATATGCTCATTAAAAAGGGGATTGGTTCACCCTGAGAACCTCTCTTCTGATGCGTCACTCCATAATAGATTACTCTCTTCTAGGTTCTAGCCTCCCATAACCCAAATAAATTAATCTTGTATAACTAACAAGGTTTATAGAGAAAAAAAACACACTTTGGTAATGGGCTGAGTTAGATAAAGGAAGGACTATACACAAAAATTAATCATGATTCTATCTCAGTTCTTATGGTTCTCTCCCTACTCAACTGACCTACTCCATGATTGTGATTGTGAACGGAGTGGATAGACATGGGAGTTAATATTAAAGGATTATGTATTTTTATGTAAGACAAGGTCAAGTTTTTATTTTTTATTTTTTGGAAGGTAAACAAGGTAAAGTTGTTGCTGCCAAAATTGGGAAAAAAACTTTTGTTACTCTCAATTAGTTTATTCCGTTTTTTATTATTATTATTTCTCAAGAGTTTCTATAGCATTGTAATTTTTAGGGGTACTCTTGATGTTTTGGGACTCATTGGTTACTTTTTCTTACAATAAAGTATA 2520 0.4028 MGRSRGNFHHADEDPNQRSRRKKNAASGENSESGAAGQGAGEGKKALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYRNVYLNSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKVVIVAGISMADLSIKAESSFSPSRAKVEDSHKAGSTNRLPSTLNPAAESDSGPSGNAHTAAGANQKASNVGRGKGGPGIVKMEDSQVDRDFGGKKPTSSGNEGPSLVESSGYNSKRQEFDPEYDNDAEQLLAEMEFKDTDTEEERELKLRVLRFYSKRLDERKRRKDFILERNLLYPNPFEKDLTPEEKAICRKYDLFMRFHSKEDHEELLRTVIAEHRTRKRLQELKEARAAGCRNSAEADRYLAQRRRREAEESARRTKESAQVGPSNQGITNVMMSPDSAGKDLSARPAGPATSSSVNEIDVMGYYGADLLSEPEKRLCCELRLPPAIYLKMQEQLSLQILAGTVSSKSDAHQLFKIDAMKIDRVYDMLIKKGIGSP 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02676 565 MobiDBLite consensus disorder prediction 447 463 - -
Pste2g02676 565 CDD SANT 108 150 IPR001005 -
Pste2g02676 565 Pfam Myb-like DNA-binding domain 107 150 IPR001005 -
Pste2g02676 565 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 48 560 - -
Pste2g02676 565 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Pste2g02676 565 MobiDBLite consensus disorder prediction 432 446 - -
Pste2g02676 565 SUPERFAMILY Homeodomain-like 475 562 IPR009057 -
Pste2g02676 565 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Pste2g02676 565 SMART zz_5 44 89 IPR000433 GO:0008270
Pste2g02676 565 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
Pste2g02676 565 CDD ZZ_ADA2 48 96 IPR041983 -
Pste2g02676 565 FunFam Transcriptional adapter 2 101 153 - -
Pste2g02676 565 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Pste2g02676 565 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Pste2g02676 565 Gene3D - 102 153 - -
Pste2g02676 565 MobiDBLite consensus disorder prediction 1 42 - -
Pste2g02676 565 Gene3D - 480 563 IPR036388 -
Pste2g02676 565 FunFam Transcriptional adapter 41 96 - -
Pste2g02676 565 SMART sant 104 153 IPR001005 -
Pste2g02676 565 MobiDBLite consensus disorder prediction 1 27 - -
Pste2g02676 565 FunFam Transcriptional adapter 2 480 564 - -
Pste2g02676 565 MobiDBLite consensus disorder prediction 219 251 - -
Pste2g02676 565 MobiDBLite consensus disorder prediction 432 483 - -
Pste2g02676 565 MobiDBLite consensus disorder prediction 203 304 - -
Pste2g02676 565 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Pste2g02676 565 SUPERFAMILY RING/U-box 48 110 - -
Pste2g02676 565 PIRSF Txn_adaptor_ADA2 35 565 IPR016827 GO:0003713|GO:0006357|GO:0035065
Pste2g02676 565 Gene3D - 41 96 IPR043145 -
Pste2g02676 565 ProSiteProfiles SWIRM domain profile. 479 565 IPR007526 GO:0005515
Pste2g02676 565 MobiDBLite consensus disorder prediction 283 299 - -
Pste2g02676 565 Pfam Zinc finger, ZZ type 46 88 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02676 Pste-Chr2 26935838 26941972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02676 1 563 EF-hand Containing Proteins AT3G07740 46.010 6.50e-160 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste2g02676 Myb_DNA-binding 2.3e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02676 2 26935838 26941972 Pste2g02676 2 26935838 26941972 ECH