Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste2g02675 | GGAAAAACGTAGAGATATATATTGGAGTCTTGGATCATCACCCGAGTTCCTCTATTTTGTGTGGCGATGGCGAGCAGAAGCGATACCCGAGGCAAGCCAATAAGATGCAAAGCTGCAATATGCAGAAAAGCAGGTGAACCTCTTATCATAGAGGAAGTTGAGTTAGACCCACCAAAGGCCTGGGAGGTCCGGATCAAGATTTTATGCACAACTCTCTGTCACTCAGATGTAACAATTTGGAAAATGAATTCGGGAGCGGTTGCTAATAAATATCCAAGAATTTTTGGACACGAAGCTGTGGGAGTAGTAGAGAGCGTGGGGGAGCATGTGGAAGAGGTTAAAGAGAGGGATTTGGTGTTGCCAGTGTTCTTATCTGAGTGTGGAGAATGCAGGGACTGCAAAAGCCCAAAAAGCAACATATGCACCAAATTCAGCAACGGGTTGATTGATTACATGCCGAGAGATGGGAGTGGCAGGTTTAGGGACATGAATGGAGAAGCAGTGTACCACTTTTTGTGTGTTAGCAGCTTCTCAGAGTACACTGTAGTGGATTTGGCCCATGTTGTCAAAATTAGCCATGATTTTCCCCTCGATAAGGCTTGCTTGCTTGGTTGCGGAGTTTCAACTGGGCTAGGGGCTGCGTGGAAGGTTGCTGTAGCAGCAAAGCAACGTGGAGCGTCAAAGATCATAGGCATCGATCTTAATGACCAAAAATTTGAAATTGGAAAAGGATTTGGAGTCACAGATTTTGTGAATCCTTCGACTTGCAAAGACAAGTCAGTTAGCGAGGTGATTAAGGAAATGACAGATGGAGGTGCTGATTATTGCTTCGAGTGCATAGGCTTGGCTTCATTAATGGCGGATGCTTTTAATAGCAGCCGAGATGTTTGCTCCCTCTCCTATTTGAAATTTTTTTTCACGCCACTTTAA | 930 | 0.4473 | MASRSDTRGKPIRCKAAICRKAGEPLIIEEVELDPPKAWEVRIKILCTTLCHSDVTIWKMNSGAVANKYPRIFGHEAVGVVESVGEHVEEVKERDLVLPVFLSECGECRDCKSPKSNICTKFSNGLIDYMPRDGSGRFRDMNGEAVYHFLCVSSFSEYTVVDLAHVVKISHDFPLDKACLLGCGVSTGLGAAWKVAVAAKQRGASKIIGIDLNDQKFEIGKGFGVTDFVNPSTCKDKSVSEVIKEMTDGGADYCFECIGLASLMADAFNSSRDVCSLSYLKFFFTPL | 287 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste2g02675 | 287 | Pfam | Alcohol dehydrogenase GroES-like domain | 40 | 169 | IPR013154 | - | |
| Pste2g02675 | 287 | FunFam | S-(hydroxymethyl)glutathione dehydrogenase | 182 | 280 | - | - | |
| Pste2g02675 | 287 | Pfam | Zinc-binding dehydrogenase | 198 | 270 | IPR013149 | - | |
| Pste2g02675 | 287 | Gene3D | - | 18 | 187 | - | - | |
| Pste2g02675 | 287 | FunFam | alcohol dehydrogenase 1-like isoform X1 | 22 | 187 | - | - | |
| Pste2g02675 | 287 | SUPERFAMILY | GroES-like | 7 | 193 | IPR011032 | - | |
| Pste2g02675 | 287 | PANTHER | ALCOHOL DEHYDROGENASE | 9 | 196 | - | - | |
| Pste2g02675 | 287 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 74 | 88 | IPR002328 | GO:0008270|GO:0016491 | |
| Pste2g02675 | 287 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 174 | 272 | IPR036291 | - | |
| Pste2g02675 | 287 | Gene3D | - | 197 | 272 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste2g02675 | Pste-Chr2 | 26923836 | 26933558 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste2g02675 | 40 | 183 | Monolignol Biosynthesis Gene Families | AT2G21730 | 32.414 | 4.59e-12 | 63.9 |