Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02659 TTTATATTTATTGGTCGTCTTCAACCCGGGGCTGCCTTCACTCACTTTTTTCTACTATGAAATGCTAGACTGAGAAAAAGAAGAAGGTGGGGAAAAGCAAAACCCTAATCTGGTGCAATCTGTGTGCCTGAGAATGGTTTCGCTGGAGGAATCTGGGTCGAATTCGAGCCGTTTCCCCTTGGCAAGGAGTTACCAGTACCACTCCTCAGTGTCCTCCAAAACGCCGCGTCACATAGGAAGGTCCATGCGAACAATACGTTCCAATTTCTTCCAAGACGACAACAGCAGCACCTGCTCCTTCACCGAGAAGTCCACCTGCGTGTCGGAGAACCTCACCGACTCCGTCGTCGACCTCCGTCTCGGCGAGCTCGCCTCGCGGAACAATAGAACTGTCAAGTCCTCTCCCGCCGATGAGGACCTCCTCGATCTGTCTCAGGCCTTCAGCGACTTCTCCGCCTGCAGCAGCGACATCTCCGGTGAGTTGCAGCGCCTCGCCACGCTACCGTCACCGCAGAAGAACGATGCCTCCAGCGAGAATGCGGAGATTGAGCCTTGCATGGGGTTCCTACAGCGGGAGAACTTCTCCACGGAGATTATCGAGAGCATTTCGCCGGAGGATCTCCAGCCGACGGTGAAGATTTGCATCGACGGCCTCCAGTCGCAGTCGGTGGCTGTGAAGCGGTCAGCGGCGGCCAAGCTCCGGCTGTTAGCAAAGAACCGCGCCGACAACCGCGTTCTGATCGCGGAGTGCGGCGCGGTTCCTGTCCTGGTTCCGCTTCTCCGGTGCAGTGATCCGTGGACGCAGGAACACGCTGTGACGGCTCTGCTGAATCTGTCTCTCCACGAGGACAATAAATTGCTGATTACCAATGCGGGAGCAGTGAAATCGCTTATTTATGTGCTGAAAACGGGAACGGAAACATCGAAGCAGAACGCGGCGTGCGCCCTTTTGAGCCTCGCGTTGGTGGAAGAGAACAAGAGCTCGATCGGGGCTTCCGGTGCGATTCCGCCTTTGGTTTCGCTTCTTCTGAGCGGTTCCAGCAGAGGGAAGAAGGACGCGCTGACGACACTGTATAAGCTGTGTTCGGTGAGGCAGAACAAGGAGAGGGCGGTGAGCGCCGGCGCGGTGAAGCCGCTGGTGGAGCTGGTGGCGGAGCAGGGGAACGGCATGGCAGAGAAGGCCATGGTGGTGCTCAACAGCCTTGCGGGGATTCAGGAGGGGAAGGATGCTATTGTTGAAGAAGGTGGAATTGCTGCTCTTGTTGAGGCTATTGAGGATGGGTCTGTGAAAGGGAAGGAGTTTGCTGTTTTGACCCTTCTTCAGCTCTGTTCTGATAGTATCACTAACAGAGGCTTTCTTGTTAGAGAGGGTGCCATTCCTCCTCTCGTTGCTCTTTCTCAAACCGGGACTATTCGAGCTAAGCACAAGGCTGAAACACTTCTTCGATATTTGAGGGAATCAAGACAAGAGGCGTCCACTTCCTCTTCTTAAAAATGATTACATTGCTACTTGGGAAGGTGGTAATTATACAATGTAATTTGATTATTGTATATATAGTGTTTTTTATGGTTTGTACAGTTTGGCCACGATAGTTGGAACTGGAACTGTGTTTATTGAAGTTAGAAGAAGCTAGCGAGCTATAGACTGACCCTTTAGATGTATGAATATAGCTAGGTTTGGGAGTGTGCTACCCCTTGTTTCGGGTTGTTATTGTTTCCTGAAGTTACATGATTGTCTTTTTTGGGTTGGTTAATTTTCTGTTTTCTTAGATGACCCTATTTTTTATGAAAAGGGTTTTTATTGAATTATTGTATGGTAATTAATTTGCCCATTCATAATGAAAGTGGCTTGTACTGCAGATTCAGCAATGTTTCCATTCATAATTTCCTTTAGGTCAACA 1901 0.5039 MVSLEESGSNSSRFPLARSYQYHSSVSSKTPRHIGRSMRTIRSNFFQDDNSSTCSFTEKSTCVSENLTDSVVDLRLGELASRNNRTVKSSPADEDLLDLSQAFSDFSACSSDISGELQRLATLPSPQKNDASSENAEIEPCMGFLQRENFSTEIIESISPEDLQPTVKICIDGLQSQSVAVKRSAAAKLRLLAKNRADNRVLIAECGAVPVLVPLLRCSDPWTQEHAVTALLNLSLHEDNKLLITNAGAVKSLIYVLKTGTETSKQNAACALLSLALVEENKSSIGASGAIPPLVSLLLSGSSRGKKDALTTLYKLCSVRQNKERAVSAGAVKPLVELVAEQGNGMAEKAMVVLNSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCSDSITNRGFLVREGAIPPLVALSQTGTIRAKHKAETLLRYLRESRQEASTSSS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02659 452 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 207 249 IPR000225 GO:0005515
Pste2g02659 452 PANTHER U BOX DOMAIN-CONTAINING 78 441 - -
Pste2g02659 452 Pfam Armadillo/beta-catenin-like repeat 280 318 IPR000225 GO:0005515
Pste2g02659 452 Pfam Armadillo/beta-catenin-like repeat 198 235 IPR000225 GO:0005515
Pste2g02659 452 Gene3D - 306 452 IPR011989 -
Pste2g02659 452 SMART arm_5 401 442 IPR000225 GO:0005515
Pste2g02659 452 SMART arm_5 319 359 IPR000225 GO:0005515
Pste2g02659 452 SMART arm_5 196 236 IPR000225 GO:0005515
Pste2g02659 452 SMART arm_5 360 400 IPR000225 GO:0005515
Pste2g02659 452 SMART arm_5 278 318 IPR000225 GO:0005515
Pste2g02659 452 SMART arm_5 237 277 IPR000225 GO:0005515
Pste2g02659 452 Gene3D - 129 304 IPR011989 -
Pste2g02659 452 FunFam U-box domain-containing protein 4 153 305 - -
Pste2g02659 452 SUPERFAMILY ARM repeat 161 441 IPR016024 -
Pste2g02659 452 FunFam U-box domain-containing protein 4 306 447 - -
Pste2g02659 452 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 289 331 IPR000225 GO:0005515
Pste2g02659 452 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 330 372 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02659 Pste-Chr2 26835856 26838125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02659 156 445 U-box Gene Family AT5G67340 51.203 9.94e-83 267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04453 6 33854848 33869936 Pste2g02659 2 26835856 26838125 PCT