Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02641 ACGCCCTTATCCATTTCCGTGGACAGTTGCCGCACAAAGGAGCTAGCTGTCTGGTGGGTTGTGAATGGTATTGGCAAGTAATGGCGCTACTACGGCTTGTGTGTTTAACTTCAACGAATCATTCCCATTCCTCTTCCTTTGGCATTGGCAAGACACCTCACTCCCAATCCTTCAATATCAAATCCTCTTCCTCTCATTTTCCATTCCTTTCCCTTACCCCAACCAAACAAGCTCCTAATCTCACTCTCGCTCTCGCCTCCACTTCCCAACAGCCTGTCGTCCAAGAAGAATTTTCTCGCACCAGGTTGCTCGCTCAGAACGTACCCTGGACAAGCACTCCCGAAGACATTCGCTCTTTGTTCGAAAAACATGGAAAAGTCCTCGAAGTCGAGCTTTCCATGTATAAAAAAGACAGAAACCGGGGTTTGGCATTCGTTGAAATGGGTTCCCCCGAAGAGGCTCTCCAGGCTCTCAACAATCTCGAATCGTATGAGTTTGAGGGTCGTGTAATGAAAGTTAATTATGCTCGCCCCAAAAAGAAGAAAACGCCACCCCCTCTCAAACCAAAGCCTCCCGTCACGTTTAACTTGTTTGTTGCTAACTTGTCCTATGAAGCCAAGTCCAAAGATCTCAGAGACTTTTTTGATTCTGGAACTGGTAAAGTTGTTTCTGCTGAGGTTGTCTTTCGTGATAATCCTAGAAGGCCGTCTGGTTTTGGATTTGTCTCCTACAAGTCCAAGAAAGAAGCTGAGTCTGCTCTTTTAGACTTCCAAGGAAAGGATTTTATGGGAAGGCCAATCAGGGTGGATCGGGGTCGGCGATTTGTTCAACAATTAGGAGAGGGGACTGCAAAGTCTGAAGATACTCCTTCCGAGTTGAGTGTGAATGCGGCAGAAGCTCAACAACCAGCGGAGGAGACTGCAAGTTCTGAAGATACTCCTTCTGAGTTGAGTGTGAATGGAGAAGAAGCTGACAAAGCTGATTGATATCAAATTTTCCCTGATGCATATCAATATTATTGATCTTATGGTTTGAACTTTTATTAACTAGAGGCTAAGAGATACAAGGAATAGGAGCAAGCACAAGCATTTTCATGATTCAAGTATGAAAAGTTGTTTGTAAATGAATAAAAACATCTCCATGGAATCAACATATCCTCATTGCATAATTTAACAATTGTTAGCGTGCTACTATGTATATCTTAAGAAAGCGAGAAACGTGTGTACTAGTGATGTTGTTTGCATATTTACTGGTTAGTGGTTACATCACAATGACGATATATTCAGCAGTTTAAGAATATTGGTTTGCCATCTACTAGAAGGATGCGCTATTCAAACATGAACCGAAGCTTGACCATAAAATGCATGTAAGATAATGAAATACTAAC 1387 0.4261 MALLRLVCLTSTNHSHSSSFGIGKTPHSQSFNIKSSSSHFPFLSLTPTKQAPNLTLALASTSQQPVVQEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLEVELSMYKKDRNRGLAFVEMGSPEEALQALNNLESYEFEGRVMKVNYARPKKKKTPPPLKPKPPVTFNLFVANLSYEAKSKDLRDFFDSGTGKVVSAEVVFRDNPRRPSGFGFVSYKSKKEAESALLDFQGKDFMGRPIRVDRGRRFVQQLGEGTAKSEDTPSELSVNAAEAQQPAEETASSEDTPSELSVNGEEADKAD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02641 301 SMART rrm1_1 75 147 IPR000504 GO:0003723
Pste2g02641 301 SMART rrm1_1 169 243 IPR000504 GO:0003723
Pste2g02641 301 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 79 145 IPR000504 GO:0003723
Pste2g02641 301 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 170 241 IPR000504 GO:0003723
Pste2g02641 301 MobiDBLite consensus disorder prediction 254 301 - -
Pste2g02641 301 PANTHER OS02G0815200 PROTEIN 50 244 - -
Pste2g02641 301 CDD RRM_SF 80 147 - -
Pste2g02641 301 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 74 151 IPR000504 GO:0003723
Pste2g02641 301 Gene3D - 46 154 IPR012677 -
Pste2g02641 301 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 168 247 IPR000504 GO:0003723
Pste2g02641 301 SUPERFAMILY RNA-binding domain, RBD 61 158 IPR035979 GO:0003676
Pste2g02641 301 Gene3D - 155 261 IPR012677 -
Pste2g02641 301 MobiDBLite consensus disorder prediction 255 290 - -
Pste2g02641 301 SUPERFAMILY RNA-binding domain, RBD 161 248 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02641 Pste-Chr2 26661346 26663324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02641 74 250 Eukaryotic Initiation Factors Gene Family AT3G16380 30.729 6.69e-15 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02641 2 26661346 26663324 Pste2g02641 2 26661346 26663324 ECH