Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02608 GGGAAACTTAGAGAACGAAGGGAGACTTCTGGGGGAGTCCGGACCAACTTGGAGAGCACGAAACACAGCAGGGTAGCATCAACACACTGTTATCGCATTCGCCGTTTGGCCAGGTCTGCTCGGACGTGGCGTTCGCATTGGCGTTTATTTTCCTCTTTCCAAACCCTAACTTCTCGCTCTTCAACCCCCTCTTCCTATCCCAAATTGGCAGCTTCCTCCTCCTCTGTGTCCAGTTCCGGAGTTCTGCGCGAGGATTATTTGCTTCCAGTTCTTTTAGCTGGTATTTTTGGAACTGGATTGGTGAAAGCAGTGTATGCGGATGATGGTGCTGTGGATGTCCAAGAAAGTGCTAAGAAGGAACGCGAGCGAATTGAGGAGCTGCTTAGAAGTAGAGGAATTCGATATGGTTCGTATCCTCGCTTCACTGTTGCCGTCAAAGGCCAAAAGGTCAGTATCAAGTTTCAAATACCTCCTGGTTGTGAAGTTTCACAACTTATTGCAAAGCTTACTTCTCATCTTGGAACTAAAGCTGAAGGCCATGGCGGTGGTTCAGACATGCTATTACGAGCTTGGGACAACACAGTTGCTTGGCAACTTACCCTTACTCATCCATCAAAACAAAAGCATATTCAAGGGAATGATCTATCTTCAATAGACATAAAATCAGATGATAGAGATCTTTGTATACTCATATTTCATTCGCTCATTGGCTCAGATAATGCAGAAATTGAATTCATTAAGCAAGGGGACTTGAGTCCTGAAGAGCTTGATGCTTTCATCTCTGTTTTACAATTGGCTGGTAACAAGTTGGGACATAGAAACACCCTGGAAAGAAAACCGAGGGAAGAGACTGAAAAGGTGCCATCTGTAGATAAATCTATTTCTGATCTGGAGGGTATGGGAGTGAGAATTTATGGACTTAATGAACCCGTAGGTATATCAAATGATGGTGAGATATCATGGGACAACATTGCTGGTTATGAACATCAAAAACGTCCTGAAGTATATGATGATATTGCTCGAGGGACTCGTCATAAGTTTGAGTCAAACAGACCTCGAGCAGTGCTATTTGAAGGTCCACCAGGTACAGGGAAAACTTCCTGTGCTCGTGTTATTGCCAACCAAGCGGGTGTCCCTTTGCTATATGTTCCACTTGAGGCAATAATGTCTGAGTTCTATGGCAAAAGTGAACGGCTCTTAGGGAAAGTGTTTTCGCTTGCTAACAGTCTCCCTAATGGTGCTATTATATTTCTTGATGAGATTGATTCTTTTGCTGCTGCTCGTGACAATGAAATGCATGAAGCTACACGTAGAATACTGTCAGTCTTATTACGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTAGTTGTGATTGCTGCAACAAATAGAAAGGAAGACCTTGATCCAGCATTAATAAGTATGTCTGGAAGAGATATTAGAGATGTTTGCCAGCAAGCAGAACGATCGTGGGCGTCAAAGATTATTCGAGGGCAAGTTCCTAAAGACGGTGAAAAGGCGCACCTTCCATCTTTGCAAGAATATATAGAATGCGCCACAAGTCGACAGGAGGCGCTGCGTAGTGCTGCCGCAAACAGGAAGTTCCGAAACTCTTCCCGCCGTAGGATTCTAAGCGACTGAGACCTTGTTTTACACTACATTTTTTTTTTGTTTCCTTCTAAAGTATTACATCTAAGGTTTTCTTTTTAATCTTCAAATAACTTACTTGATGTAGATTGCCCCCCACAAATTTTGCTGTGT 1761 0.4333 GKLRERRETSGGVRTNLESTKHSRVASTHCYRIRRLARSARTWRSHWRLFSSFQTLTSRSSTPSSYPKLAASSSSVSSSGVLREDYLLPVLLAGIFGTGLVKAVYADDGAVDVQESAKKERERIEELLRSRGIRYGSYPRFTVAVKGQKVSIKFQIPPGCEVSQLIAKLTSHLGTKAEGHGGGSDMLLRAWDNTVAWQLTLTHPSKQKHIQGNDLSSIDIKSDDRDLCILIFHSLIGSDNAEIEFIKQGDLSPEELDAFISVLQLAGNKLGHRNTLERKPREETEKVPSVDKSISDLEGMGVRIYGLNEPVGISNDGEISWDNIAGYEHQKRPEVYDDIARGTRHKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEAIMSEFYGKSERLLGKVFSLANSLPNGAIIFLDEIDSFAAARDNEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISMSGRDIRDVCQQAERSWASKIIRGQVPKDGEKAHLPSLQEYIECATSRQEALRSAAANRKFRNSSRRRILSD 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02608 546 MobiDBLite consensus disorder prediction 1 21 - -
Pste2g02608 546 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 308 474 - -
Pste2g02608 546 CDD RecA-like_protease 340 478 - -
Pste2g02608 546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 504 IPR027417 -
Pste2g02608 546 Coils Coil 110 130 - -
Pste2g02608 546 Gene3D - 311 494 IPR027417 -
Pste2g02608 546 SMART AAA_5 351 488 IPR003593 GO:0016887
Pste2g02608 546 Pfam ATPase family associated with various cellular activities (AAA) 355 474 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02608 Pste-Chr2 26225163 26236219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02608 318 473 Calmodulin-binding Proteins AT3G56690 32.927 1.91e-18 87.4