LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g02601	ACTCAACACTCTCGTGTTCCTTTTTCTTTGTTCTCTCTCTTCATAACACCAAGCTTCGAATCTCCAATATCTGTCCCTTTCTTTAATGGCCTTGCCTTGTACAACCAGTCGCGATCTGAAACTCAACTACTACGGTACTAATACCACCCCCATTCCCTCTCTTCTTCTCTTTCGCCTCCATGATACTCTGCATGTGCCTCTCCACACCTGAACCATGCTTCTGATCGCAATGCCTCCTCCCCGTTCCCCTCTTTCTTTCCTTTTCACTTTCTTCTTCCTTTCTCTTCCTCTTTCCATAGCCACCACTGACCCTTCTGATGTTCAAGCTCTTCAGGTGATGTACAATGCGTTGAATAGTCCAACTCAACTAACGGGTTGGAAAATCGGCGGCGGTGATCCGTGTGGAGAGTCATGGAAAGGGGTAACATGTGAGGGTTCAGCCGTTGTTTCCATTGAGCTCTCAGGTTTAGGACTCGATGGGACACTGGGGTACCTGCTTTCGGACCTTATGTCACTCAGGAAGCTTGACTTAAGTGACAACAACATCCATGATACGATTCCCTACCAGTTGCCGCCGAATCTTACAAGCCTGAATTTTGCAAGAAATAATTTATCTGGAAATCTTCCTTATTCCTTTTCTGCCATGGTTTCACTCAATTATTTGAATTTAAGCAATAATGCGCTCTCCATGACAATTGGCGATATTTTTGCTGGTCTTTCAGATCTTGGTACCCTGGATCTATCATTCAATAACTTCTCTGGGGATCTTCCTCCTTCATTTGGAGCATTGGCCAATCTTTCTTCTCTTTTCTTGCAGAAGAACCAGTTGACTGGGTCTATTGGTGTTCTCATTGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATAATTTCAGTGGACAGATACCTCATGAGCTTAGTTCCGTCCATAATTTTATATATGAAGGAAATTCTTTTGAGAACAGTCCTGCTCCTCTTCCGCCAGAATCTACTTCACCTCCTCCTGGTGGATCTCGTAGTCATCATCGTTCTGGATCTGGTTCACATAATAGAACACAAGCTTCTGGTAATGAAAAATCTGATGGCCATAAGGGTTTGACTGTGGGGGCTATTGTAGGCATTGTTTTAGGTTCAGTTGTGGTGGCAGCTATTTTGTTACTTGCCCTTGTTTTCTGTATCCAAAAGCAAAAGAAGAAAAAGGAAGCAAGGAATTTTAGTGGGAGCCTACCTCGTGGAGTTATTAATGTAACTCCTCAGATGCAAGAGCAGAGGGTAAAAAGTGCTGCTGTTGTTACAGATCTAAAACCTCGTCCAGCAGAAAATGTGACAGTTGAGAGGGTACCTGTAAAAAGTGGATCTGTCAAGCAGATGAAGTCGCCTATAACTTCCACGTCATATACAGTTGCATCTCTTCAAAGTGCAACAAATAGCTTTAGTCAAGAATTTATTATTGGTGAAGGTTCTCTTGGCCGAGTTTACAAGGCTGATTTCCCAAATGGGAAGGTAATGGCTATCAAGAAGATCGACAACTCAGCACTGTCATTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCACATATGTCACGCTTGCGGCACCCAAACATAGTGACATTGGCTGGATATTGTGCGGAGCATGGCCAACGGCTTCTAGTTTATGAGTATATAGCAAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGCAAGTTTTTGTCTTGGAATGCTCGTGTACGCATAGCACTTGGCACGGCCCGGGCTTTAGAGTACTTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGGAATTTCAAATCAGCAAATATATTACTTGATGAGGAGCTCAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTTTGACACCGAACACTGAGCGACAGGTATCAACTCAGATGATCGGTTCCTTTGGTTATAGTGCTCCCGAGTTTGCATTATCAGGAGTATATACTGTAAAAAGTGATGTTTACAGCTTTGGAGTGGTTATGCTAGAACTGTTGACTGGTCGGAAGCCACTTGACAGTTCAAGGGTTAGATCAGAGCAATCACTTGTGAGGTGGGCTACCCCCCAACTCCACGATATAGATGCCTTGGCCAAAATGGTTGATCCTACGTTGAACGGAATGTATCCTGCGAAATCATTGTCACGCTTTGCTGATATCATTGCCCTCTGTGTTCAGCCGGAACCTGAATTTCGACCTCCAATGTCAGAGGTGGTGCAAGCTTTGGTTCGGTTAGTGCAAAGAGCCAGCGTGGTTAAAAGACGACCCAGTGAGGAATCTGGTTTTGGTCACAAGACCCCAGAACATGAGGCCATAGACATGTCATTTTAAATGTTAGTGCCTCTGCCCTCTCTAGTCTTTGCAATTTTGTGCAGTTCCCCGGCTTAAAAATACGACCCTAAAGCTAAAACACACGAAGGAGTAGAAAGTTTGTGAAAATGTATCAACCAATTTCAGATACTAATTACGTGTTATATATATAATTTTTGTCATAACATTTCATACTCTGGAAAAATAAGCTGTATATTTAATTAACTTGACATGCTG	2578	0.4302	MLLIAMPPPRSPLSFLFTFFFLSLPLSIATTDPSDVQALQVMYNALNSPTQLTGWKIGGGDPCGESWKGVTCEGSAVVSIELSGLGLDGTLGYLLSDLMSLRKLDLSDNNIHDTIPYQLPPNLTSLNFARNNLSGNLPYSFSAMVSLNYLNLSNNALSMTIGDIFAGLSDLGTLDLSFNNFSGDLPPSFGALANLSSLFLQKNQLTGSIGVLIGLPLDTLNVANNNFSGQIPHELSSVHNFIYEGNSFENSPAPLPPESTSPPPGGSRSHHRSGSGSHNRTQASGNEKSDGHKGLTVGAIVGIVLGSVVVAAILLLALVFCIQKQKKKKEARNFSGSLPRGVINVTPQMQEQRVKSAAVVTDLKPRPAENVTVERVPVKSGSVKQMKSPITSTSYTVASLQSATNSFSQEFIIGEGSLGRVYKADFPNGKVMAIKKIDNSALSLQEEDNFLEAVSHMSRLRHPNIVTLAGYCAEHGQRLLVYEYIANGNLHDMLHFAEDSSKFLSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMIGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSEESGFGHKTPEHEAIDMSF	715

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g02601	715	Gene3D	Ribonuclease Inhibitor	32	282	IPR032675	-
	Pste2g02601	715	MobiDBLite	consensus disorder prediction	695	715	-	-
	Pste2g02601	715	FunFam	Protein STRUBBELIG-RECEPTOR FAMILY 8	372	484	-	-
	Pste2g02601	715	Pfam	Protein kinase domain	410	679	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste2g02601	715	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 3	32	259	-	-
	Pste2g02601	715	Pfam	Leucine rich repeat	100	157	IPR001611	GO:0005515
	Pste2g02601	715	Gene3D	Transferase(Phosphotransferase) domain 1	485	701	-	-
	Pste2g02601	715	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	21	685	IPR046959	-
	Pste2g02601	715	ProSiteProfiles	Protein kinase domain profile.	407	684	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste2g02601	715	MobiDBLite	consensus disorder prediction	264	284	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g02601	Pste-Chr2	26152798	26159741	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g02601	144	715	Strubbelig Receptor Gene Family	AT4G22130	70.906	0.0	810

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Pste2g02601		Pkinase	5.2e-45	CL0016

Showing 1 to 1 of 1 entries