Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02595 ATGAGTAGGCAGGTTCTGCTGGTCCTAATGGAGTTGTTAATCATGAGTATGAGGAGAGTGGAAGGTGGGTGTGTGAGTGGGTGCAGGCTTGCTTTAGCATCGTATTACGTAAGGGAAGGCACAAACCTGAGTTACATAAGCGGGCTCTTCGGAAAGCCCATAACGGAGATTGTGAGGTACAACCCAAGTGTGAAGAGCCCAGACGTGATTCAGAGCGAAACGAGGATCAACGTGCCGTTCTCGTGCGAGTGCTTGAACGGTGCGTTTTTGGGCCACACATTCTCGTACAAAACCCAACACGGCGACACCTACAAAGTCATTGCTGAGATTCAATTTTCAAACCTCAGCAGCGAGGATTGGGTGGGAAGGGTGAATACTTACCCGCCTAATCAGATACCCCAAAACGTAAACATAAACGTCACTGTTAACTGCTCATGCGGAAACAGACACGTGTCAAGGGATTATGGACTTTTCATCACTTACCCACTCAGGCTGGGGGACACCTTGGAGGGTATTGCAGCGGAATCCGGTGTGGCGCCCCACTTGCTGCTAAGCTACAACCCCGCCTCCCACTTTACTGCTGCAAATCAACTCCTCTTTCTGCCGGCTAAAGATGCTGACATTGTTATGCAAATTTCAATAGGAATGTCTGGTGGAGCAGTTGCTGGCATAGCTGTTGGAGGAGCTGTTGGGGTCTTAATTTTAGCCCTTCTTCTATATGTTGGACTACACAAAAAAAGGAAAGTGGCTGAGGTATCCCTTCACCTAGTCCCAGGAGCATCTGAAGATCACTGTAGTCCACTCCATCAGGGTTGTGGAAGCAGCTTGGACAAGGCATCAGAATCTTCTGTTGTTTTTTCTCCTAGGTTGGCAGGGATTACAGTGGACAAGTCAGTGGAGTTCTCATATGAGGAGCTAGACAAGGCTACTGATGCCTTTTGTGTGGCTAATATAATTGGTAAAGGTGGCTTTGGATCTGTTTACTATGCTGAGCTTCGGAATGAGAAAGCTGCAATAAAAAAGATGGATATGCAAGCATCAAATGAATTTCTTGCAGAATTGAAGGTTCTGACACACGTCCATCACTTGAATTTGGTGCGGTTAATAGGATATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAGTATATTGAAAACGGCAATTTAAGTCAGCATTTACGAGGCTCAGGGAGGGATCCATTAACATGGGCAGCTAGAGTTCAAATCGCCCTTGATGCAGCAAGAGGACTGGAATACATCCACGAGCATACAGTTCCTGTCTACATCCATAGAGATATTAAATCAGCAAACATTTTGATAGACAAAAACTTTCGTGCAAAGGTTGCAGATTTTGGTCTCACAAAATTGACTGAGTATGGTAGTTCTTCATTACATACACGTCTCGTGGGTACATTTGGTTATATGCCTCCAGAATATGCACAATACGGTGATGTTTCGTCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTCTATGAACTCATATCAGGCAAGGAGGCTATCGTGAAGACAAACGAACCAGAGAATGAATCAAAAGGACTAGTTGCCTTGTTTGAAGAGGTTCTTGGTCTATCAGACCCAAAAGAAGATCTTCGTCAACTTGTTGACCCTAGACTTGGAGACAACTACCCTCTTGATTCGGTAATTAAGGTGTGTCAGCTTGCGAAAGCATGTACACATGAAAACCCTCAACTTAGGCCAAGCATGAGATCAATTGTGGTTGCCTTGATGACACTTTCATCAGCAACTGAGGATTGGGATGTTGGCTCCTTCTATGAAAACCAAGCTTTAGTGCACCTAATGTCTGGAAGGTAGCCCGTACCCGTTGCCTCAGCCTACCAAGTTCCTTTGTCAGGATCAATAGAATCCCC 1892 0.4508 MSRQVLLVLMELLIMSMRRVEGGCVSGCRLALASYYVREGTNLSYISGLFGKPITEIVRYNPSVKSPDVIQSETRINVPFSCECLNGAFLGHTFSYKTQHGDTYKVIAEIQFSNLSSEDWVGRVNTYPPNQIPQNVNINVTVNCSCGNRHVSRDYGLFITYPLRLGDTLEGIAAESGVAPHLLLSYNPASHFTAANQLLFLPAKDADIVMQISIGMSGGAVAGIAVGGAVGVLILALLLYVGLHKKRKVAEVSLHLVPGASEDHCSPLHQGCGSSLDKASESSVVFSPRLAGITVDKSVEFSYEELDKATDAFCVANIIGKGGFGSVYYAELRNEKAAIKKMDMQASNEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDPLTWAARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSSKIDVYAFGVVLYELISGKEAIVKTNEPENESKGLVALFEEVLGLSDPKEDLRQLVDPRLGDNYPLDSVIKVCQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVHLMSGR 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02595 611 SUPERFAMILY Protein kinase-like (PK-like) 294 583 IPR011009 -
Pste2g02595 611 ProSiteProfiles Protein kinase domain profile. 313 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02595 611 Gene3D Transferase(Phosphotransferase) domain 1 384 595 - -
Pste2g02595 611 Pfam Protein tyrosine and serine/threonine kinase 317 582 IPR001245 GO:0004672|GO:0006468
Pste2g02595 611 Pfam LysM domain 35 79 IPR018392 -
Pste2g02595 611 CDD STKc_IRAK 319 580 - -
Pste2g02595 611 Gene3D LysM domain 26 85 IPR036779 -
Pste2g02595 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Pste2g02595 611 ProSiteProfiles LysM domain profile. 33 78 IPR018392 -
Pste2g02595 611 FunFam PTI1-like tyrosine-protein kinase 3 384 597 - -
Pste2g02595 611 FunFam LysM receptor kinase 2 292 383 - -
Pste2g02595 611 SMART LysM_2 34 79 IPR018392 -
Pste2g02595 611 SMART LysM_2 160 202 IPR018392 -
Pste2g02595 611 SMART serkin_6 313 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02595 611 Gene3D Phosphorylase Kinase; domain 1 298 383 - -
Pste2g02595 611 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 4 597 IPR044812 GO:0019199|GO:0045087
Pste2g02595 611 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02595 Pste-Chr2 26107431 26119014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02595 1 611 Receptor kinase-like Gene Family AT3G21630 54.153 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste2g02595 PK_Tyr_Ser-Thr 2.2e-47 CL0016