Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02560 ATGAAGAAACTTTGTTTGCCTTTAAAATGCATTGCCTTGGCTTTAAGACAAAGAGGAATGGCAAGGGGCCGTTGTAACACCACCTCAATGAAGGGTGAAGCTCTCAAACGCTCCCCACCTTCCACCATGTCTTCTTCTTCCTCTTCTCTTATCACCACTCTTGTTGATAACAATAACCCTTCTCTGTTAAGACCTCCTCGCCGTCGTTTCGCCTCTCATCACCTTCCTCAGATAACCCTCAAAACGCCCATGGTTAGGCCTTATCTTCGATCAAAAATGCCTAGGCTTCGTTGGACACCAGATCTCCATCGTTGCTTCGTGCATGCAGTTCAACGACTTGGAGGAGAAGACAGGGCCACACCGAAGTTGGTTTTACAGCTGATGAATGTAAAGGGGCTTACTATATCTCATGTCAAAAGCCACCTTCAGATGTACAGGAGCATGAGGCACGAGCAGATGAGTCAAGTAGGTGCAAAGCAGAATGATATGGCTCCGGATTTCCCAGCTTCGACTCTTGGCCCCAGGTACGACCAACAGAATCCTCACCAAAGAACCTGCACTGAAGAGCTTGTTCCCACCCAAGCTCAATGGAATGATGATGAGCAAGTGCAAGAGTGCAACAATGGAAGGCAAGGAAGTGAATCAATTGTAATCTGTAACGGCAATGAACAGAAGATGCATTCCTACATCATCTTCGAGGGTCTTCTCACAGGCCAGACTGTCCAAGGGAATAAGAATAAAATTGCTCCTGAAGAGGTGTCACTAGAGGATGCCGGTTACGAAAGCGACCATGAAAGATTCCAAGACAGAAGTACTGGCATAGGAGAGAGAGTCGCTGAAGACACAGTGTCCCTGTCAATGAGCTCAAGACCTTCACATTCGTTCCTCAATCGCAGCCACACTGGTCCATATGCCAATGATGTCTCTCTTGAGCTCACGCTCTCCTTCTCTTAG 954 0.4738 MKKLCLPLKCIALALRQRGMARGRCNTTSMKGEALKRSPPSTMSSSSSSLITTLVDNNNPSLLRPPRRRFASHHLPQITLKTPMVRPYLRSKMPRLRWTPDLHRCFVHAVQRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRSMRHEQMSQVGAKQNDMAPDFPASTLGPRYDQQNPHQRTCTEELVPTQAQWNDDEQVQECNNGRQGSESIVICNGNEQKMHSYIIFEGLLTGQTVQGNKNKIAPEEVSLEDAGYESDHERFQDRSTGIGERVAEDTVSLSMSSRPSHSFLNRSHTGPYANDVSLELTLSFS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02560 317 Gene3D - 93 151 - -
Pste2g02560 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 150 IPR017930 -
Pste2g02560 317 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 59 198 IPR046955 GO:0003700
Pste2g02560 317 NCBIfam myb-like DNA-binding domain, SHAQKYF class 94 147 IPR006447 GO:0003677
Pste2g02560 317 SUPERFAMILY Homeodomain-like 92 148 IPR009057 -
Pste2g02560 317 FunFam Myb family transcription factor 92 150 - -
Pste2g02560 317 MobiDBLite consensus disorder prediction 31 48 - -
Pste2g02560 317 MobiDBLite consensus disorder prediction 28 48 - -
Pste2g02560 317 Pfam Myb-like DNA-binding domain 96 146 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02560 Pste-Chr2 25841874 25846797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02560 85 157 G2-like Transcription Factor Family AT2G42660 73.973 5.08e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste2g02560 Myb_DNA-binding 1.5e-07 CL0123