Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02559 GACGTCAGATCGCAGCCACACTGCCCTGTGAACCTTTAACCTCCACTCCTTCAACCGTACACCTTCTCACAAGGGATAACTAACTCCTACTACAGCTACTTCCACTTTCATTCTTTCTTTCTTCTTAATCGAGAAACACCTTTCACCACACGCCCACGTTCACGCCGTCAAACCAAATTTCACACTCCTTTCTCTTCACTGCGTTCCACCAAACACACACCTCACTCACTCCATTCAATTCTCAATTCTCGCTCTCTCCCTCTTCTCCAACCTTCCACATCTTCCCGCGCTTCCAATTTCCCTCACGTAAACCATGCTCCACCGTTGACGAAATTAGGGTTTCTGCTGTTGCAATCCATGTCCACCGTGAATTCGCAGCAGTCTCTGCAGTTCGAGGACCCTGCCATGCCCCTTGACGACGACGACGACGACGACGACGACGACGAAGACCGTGGTGATGATGCCATGGATGAGTTGGAAGAAACGAACGTTAATTCGGTGAACGCTGCTAATGCCGCGAGTGCGAGCCATGAAGCGGGAGTGGCTATGCCTTCCAGAACTAGCGAACTCACTCTTTCTTTCGAGGGTGAGGTTTATGTCTTTCCCGCTGTCACTCCTCAGAAGGTGCAAGCCGTCTTGCTGCTTCTGGGAGGACGTGATGTGCAGGCAGGTGTGCCAGCAGTTGAACTACCATTCGATCAAAGTAACATGGGCATGGGTGTTACTCCAAAGCTTTCAAACCTTTCACGAAGAATAGCATCCTTGGTCAGGTTCCGCGAGAAACGCAAGGAGAGATGTTTTGACAAGAAAATTAGGTATTCGGTGAGAAAAGAGGTGGCACAGAGGCCTGAGTTGTCAGATAGTTGGTACTTGAGTACCACTTTGAGGGCTTCTAGCAGGATTTTGTTTGATTTCAGGATGCATCGGAAGAATGGGCAGTTTGCATCCTTGAAGGAAAGCCCAGGCTCATCGAATTGGGATTCTGAACGGAGTTCTGGTCAAGATGGCACTTCTTATTCTGAATCTGTACGTAAATGTCACCATTGTGGTGTAAGTGAAAATAATACTCCTGCAATGCGTCGGGGGCCAGCTGGACCAAGGACTTTATGTAATGCATGTGGTCTTATGTGGGCTAACAAGGGCACACTCAGAGATCTCACTAAGGGAGGAAGAAATCCTTCTGTTGAGCAAAGTGATCTGGACACTCCTATTGATGTCAAGCCTAGTTCTGTTCTTGAAAGGGAATTGCCTGGCATCCATGATGAGCAAGGTAGTTCTGAAGATCCTTCCAAGTCCAATGCAGCTGATGGTTGTAGTAATCATGCTGTAAACCCTAGTGATGAGGAATTGCCTGAAACTTCAAAACACTTTACGAACGCTCTGCCACTGGGAATTGATCGTTCTCCAACAAATGACAATGAACAGGAACCTCTGGTCGAGCTTTCTAATCCTTCAGATACAGATATTGACATTCCAGGAAACTTTGATTAGAAGGTACTAAGTGATTCATTACGTTGAGGGATTTTATATAATGGTCCCTCTGTAGTATATTGTTGGTGTACTAATGAGATGCAGATGTAAAAGCAGTGATACATACCAATAGACAATTAGGAAATTCGGGGTTATGAATTATTGTATCCCTCAGAAATGGAAATGATTACCGATTAGCAAGGGTCAAGAAGCTCTGCTGTTCGGGCCTAACATTAAGTAGTCCGCAATATTGGTGCTCATAAGTGCCAAAACATTGTGTATATATATGTTATCAGATGCTCTTCCTTCAGTGTTTATATCAGGAAATATTCATTAGTTAAGGCCGTCCTTAGTAACAATGCTGTCTGCTTGTCCCTGACCAATAATTTTATTGAGATCAAAGCTCTGCTACCCTGATTTTAGAGATGAAATTTCGGTGATATGCTGTGCCACTCAACTCAAGGATGAATTGCTTGTGCTAATTCCAACCTTTGACGAAGTTTAGACTTGTGCCGCAGGGCTCTTGATGAAAACATTTGGATATGTTAATTCGTACAGATAGACAGACTTGTTCCAACTTCCAAATGTACACACATATATATAAATAAATATTAGTTGTCGTCTTCTGTGTTTTTCCATACATATGTTATCATTGTTGTTGCAATGGCCTGAAATGGATTGCCAATGTAGTCATAATCATATCCTAATTTTATATTAAGCATAGTCTTGTTAGAA 2205 0.4385 MSTVNSQQSLQFEDPAMPLDDDDDDDDDDEDRGDDAMDELEETNVNSVNAANAASASHEAGVAMPSRTSELTLSFEGEVYVFPAVTPQKVQAVLLLLGGRDVQAGVPAVELPFDQSNMGMGVTPKLSNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRPELSDSWYLSTTLRASSRILFDFRMHRKNGQFASLKESPGSSNWDSERSSGQDGTSYSESVRKCHHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLTKGGRNPSVEQSDLDTPIDVKPSSVLERELPGIHDEQGSSEDPSKSNAADGCSNHAVNPSDEELPETSKHFTNALPLGIDRSPTNDNEQEPLVELSNPSDTDIDIPGNFD 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02559 377 Gene3D - 219 278 IPR013088 GO:0006355|GO:0008270
Pste2g02559 377 MobiDBLite consensus disorder prediction 1 47 - -
Pste2g02559 377 SMART GATA_3 221 274 IPR000679 GO:0006355|GO:0043565
Pste2g02559 377 ProSiteProfiles Tify domain profile. 64 99 IPR010399 -
Pste2g02559 377 Pfam CCT motif 132 162 IPR010402 GO:0005515
Pste2g02559 377 MobiDBLite consensus disorder prediction 16 41 - -
Pste2g02559 377 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 225 271 - -
Pste2g02559 377 SMART tify_2 64 99 IPR010399 -
Pste2g02559 377 Pfam GATA zinc finger 227 263 IPR000679 GO:0006355|GO:0043565
Pste2g02559 377 CDD ZnF_GATA 226 274 IPR000679 GO:0006355|GO:0043565
Pste2g02559 377 PANTHER GATA TRANSCRIPTION FACTOR 28 14 370 IPR045280 GO:0006355
Pste2g02559 377 MobiDBLite consensus disorder prediction 197 221 - -
Pste2g02559 377 ProSiteProfiles CCT domain profile. 132 174 IPR010402 GO:0005515
Pste2g02559 377 ProSiteProfiles GATA-type zinc finger domain profile. 221 280 IPR000679 GO:0006355|GO:0043565
Pste2g02559 377 Pfam tify domain 66 98 IPR010399 -
Pste2g02559 377 ProSitePatterns GATA-type zinc finger domain. 227 254 IPR000679 GO:0006355|GO:0043565
Pste2g02559 377 MobiDBLite consensus disorder prediction 264 377 - -
Pste2g02559 377 MobiDBLite consensus disorder prediction 345 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02559 Pste-Chr2 25837314 25845296 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02559 10 269 Tify Gene Family AT1G51600 44.118 4.28e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pste2g02559 GATA 2.1e-13 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02559 2 25837314 25845296 Pste2g02559 2 25837314 25845296 ECH