Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02557 ATGAGGAAGCTCCAATCTTCTCATGGACTATTGAATATAATCTATGTTCCACATTTTTTTCTTTCTGCTTACTATTTTAGCTGTTTGACTTTATTTGCATCAATGCCTATTTCTTACCTGATTGTTAAATGTAGGATGCATCGTAATAAGGGTCAGTTTACTTCATCTAAGAAACAAGATGGAATTAATAGTTGGGGCTCAGATCAAGAGTCAGGGCAGGATGCTGTTCAATCAGAAACCTTGTGCACACATTGTGGAATAAGTTCAAAATCCACTCCAATGATGCGAAGGGGGCCATCTGGTCCAAGGTCACTTTGCAATGCTTGTGGGCTCTTTTGGGCAAACAGGGGCACTTTGAGGGATCTTTCTAAGAGAAACCAGGAACACTCTCATGCACTAACTGATCCTGTTGATGAGGCTAGTAATAATGACTTGGACCGTCGCAGTGCTATCCCTCCACAACAAAACAACAATCTTGTTAATGATAACAAAGCTTTGGTATCTGATCGTTGA 513 0.4035 MRKLQSSHGLLNIIYVPHFFLSAYYFSCLTLFASMPISYLIVKCRMHRNKGQFTSSKKQDGINSWGSDQESGQDAVQSETLCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGTLRDLSKRNQEHSHALTDPVDEASNNDLDRRSAIPPQQNNNLVNDNKALVSDR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02557 170 ProSitePatterns GATA-type zinc finger domain. 82 109 IPR000679 GO:0006355|GO:0043565
Pste2g02557 170 ProSiteProfiles GATA-type zinc finger domain profile. 76 127 IPR000679 GO:0006355|GO:0043565
Pste2g02557 170 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 76 132 - -
Pste2g02557 170 SMART GATA_3 76 129 IPR000679 GO:0006355|GO:0043565
Pste2g02557 170 Gene3D - 73 132 IPR013088 GO:0006355|GO:0008270
Pste2g02557 170 MobiDBLite consensus disorder prediction 147 170 - -
Pste2g02557 170 Pfam GATA zinc finger 82 118 IPR000679 GO:0006355|GO:0043565
Pste2g02557 170 MobiDBLite consensus disorder prediction 125 170 - -
Pste2g02557 170 PANTHER GATA TRANSCRIPTION FACTOR 28 42 157 IPR045280 GO:0006355
Pste2g02557 170 MobiDBLite consensus disorder prediction 125 145 - -
Pste2g02557 170 CDD ZnF_GATA 82 127 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02557 Pste-Chr2 25806194 25811364 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02557 42 137 Tify Gene Family AT4G24470 70.833 1.17e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pste2g02557 GATA 2.3e-14 CL0167