Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02540 CTAGATAGCGGCGCATTTGAATCCGCATCTTTCAAAAGTGAGAAGGAGAAGGTAGGAAGAGGTGGCAAACGGCGAAGACGGAAAGTGAAGTGCACAACCACATACTTTTTCCCGCGTCAATTCCCTGAGCGAGGGTTGGATGAATCTTCAAAACAGCTATTAGATCACGAGAAAAAGAAGACCGTCAACTCGATCAAACATGACACGTTTGGCGCCGAAAGCGACTCTATCAAAAAGCCACTTCCGGCCAAAGACGACGACGTCGTTCTCTCCTCCGTCTCCGACCTATTGGCTGCCGGCGAGAAGTTCCGAACGACGCACAAGCAAATCGCCGCGTTCTTCGATTGGCTGATCGACAAGAAAGTAAGTCACTCCAACCACGACCTACTTCTTCCGCCGGAAACCACCGTCAAGGATGCTGCCGTTGACCAGAGCTTTGACCGACAGGTTTCGCTGCCTAGGCTTTCCAGCGGGAGCAGCTATGCTGGAAGCTTGTTTTCGGGGACGACGTTGGATTGCAATTTTTCCAGCGACATTAAGGAGGAAACGTCGTCGTTTCGCACGCTCACTACTATCCCTGCGCCGCGGCACAAGGATGAGGAGGAAGAGGAGGTGGAGGAGCAGAGCATTGAGAAGTTGGCGAAGAAGTCTAAACAGAGCTACATCTTGCAACTTACGTTAGCGAAGAGATTCACGTGTTTGGCTAGCCTCGTCACCGAACCTGTTCTTACTCCTGGTATCGAAACCTGGGATGCTGAGTCCATATCTGATGGATTTTATAATATATTGGGGATGAATCCGTATCTGTGGGTGATGTGTAATGATGTGGAGGAAGGTAGAAGGATACCTACTTTGATGGCGCTAAAAGCGGTTGAGCCAAGCGAGACTTGTATGGAAGTGGTGCTTGTTGATCGACGCGAGGACTCTCGATTGAAGCTGCTTCAGGATAAAGCGCAAGAGTTGTATTGTGCTTCCGAGAACACGTTGGTGTTGGTGGAACAGCTAGGGAAACTTGTTGCCGTTTATATGGGGGGTATGTTCCCGGTGGAGCAAGGGGACCTCCACAAGCGCTGGAAGTTGGTTAGTAAGAAGTTGAGGAATCTTCACAAGTGTGTAGTGCTTCCCATTGGCAGCCTGTCCACCGGGCTTTGTAGGCATCGGGCAATTCTTTTTAAGAGATTGGCAGATTATATTGGTTTGCCCTGTCGCATAGCCCGAGGTTGCAAGTACTGTGTTGCAGATCATAGATCCTCTTGCCTTGTCAAAATTAAGGATGACAAGCAGCTCTCAAGGGAATATGTGGTTGACCTAGTTGGGGAACCAGGAAGTGTCCATGGACCAGATTCCTCAATTAATGGAGCATATGTTTCTTCGATGCCTTCCCCTTTTCAAATTTCTCACTTGAAAGAATCACAATCACCTTATATGGATGACACAGCAAGTTCTCATTCTATAAGTTCCAATCAGAAACCTGTAAATCATGAAAGTCTACCGTATTCAGCCTGTGGACAGAATGATCAACAAATTGAAGAAACTGATTTGCTGAAAAATCACAAGGGTACCATTTATGCTTCTGTTGATCAAATCTGTGAGGAAACAGAATCACTTCTAATTCCTTTTGGTTTAGAAGGGAATGATGAGGAGTGTGCAGTTCTTAGTTCAATCTTGCCTACCATCCATGAAGATGTTCCTAAAGCTCTCCATCCAGCTATTGAGACATCAGTACTTGAATATCCAAGGCTTAGTGAAGATGTTCTACAAGAAACCTCCAACACTGAGATAATTGTAAATGGAAGTTTGGTCGTGAAAAGTGCTTTCAAGCAATCTATACTTGGTTCGTCCAGCCAGTCAGAACTGAAACAGGTAGACAATAGAATTGAAAACCAGGGTTGTTTACCTGTTGTGAATATTCCAAGATATGTAAATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATATCATGGGAAGATTTACGAATTAAGGAGCGTGTTGGTGCTGGCTCATTTGGTACAGTGTACCGTGCTGAATGGAATGGATCAGATGTTGCAGTCAAGGTTTTAACAGTTCAGGATTTCGAAGATGATCAGTTGAAGGAGTTTTTGAGAGAGGTTGCAATAATGAAACGCGTTCGCCATCCTAATGTGGTGCTCTTCATGGGATCTGTTACAAAACGCCCACATCTATCAATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATACCGCCTCATACACAGACCAGGGTCTGGTGAAATTCTGGATAAGAGAAGGAGATTAAGGATGGCATTGGATGTGGCTAAAGGGATCAATTATCTACACTGTCTGAAACCTCCTATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGATAAAAATTGGACTGTGAAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCATACCATCCAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCCTCCAATGAGAAATCTGATGTATACAGTTTTGGAGTTATCCTTTGGGAGCTTGTGACCCTGCAACAACCATGGAGTGGTCTGTGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGAAGGCTTGCTATCCCTCCTAACATCTCCCCGGCAATGGCCTCCCTCATGGAATCTTGTTGGGCCGATGACCCTAGTGAACGCCCATCTTTTGCTGACATAGTTGACTCACTAAAGAAGCTGGTAAAATCTCCAGTAGAGGTGATCAAGATGGCGGATACATAGAGTATACGCATCCCATAATTGGGTTTTCTTACCCTAGAAATTTGTTGCGCATAGAGTATATCTGCAATTAACCAGTGTAATTTTTTGGTCGAACTTCTTGTGTATTTCTATTATACCTTCCAAG 2914 0.453 LDSGAFESASFKSEKEKVGRGGKRRRRKVKCTTTYFFPRQFPERGLDESSKQLLDHEKKKTVNSIKHDTFGAESDSIKKPLPAKDDDVVLSSVSDLLAAGEKFRTTHKQIAAFFDWLIDKKVSHSNHDLLLPPETTVKDAAVDQSFDRQVSLPRLSSGSSYAGSLFSGTTLDCNFSSDIKEETSSFRTLTTIPAPRHKDEEEEEVEEQSIEKLAKKSKQSYILQLTLAKRFTCLASLVTEPVLTPGIETWDAESISDGFYNILGMNPYLWVMCNDVEEGRRIPTLMALKAVEPSETCMEVVLVDRREDSRLKLLQDKAQELYCASENTLVLVEQLGKLVAVYMGGMFPVEQGDLHKRWKLVSKKLRNLHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCKYCVADHRSSCLVKIKDDKQLSREYVVDLVGEPGSVHGPDSSINGAYVSSMPSPFQISHLKESQSPYMDDTASSHSISSNQKPVNHESLPYSACGQNDQQIEETDLLKNHKGTIYASVDQICEETESLLIPFGLEGNDEECAVLSSILPTIHEDVPKALHPAIETSVLEYPRLSEDVLQETSNTEIIVNGSLVVKSAFKQSILGSSSQSELKQVDNRIENQGCLPVVNIPRYVNLEPSLAMDWLEISWEDLRIKERVGAGSFGTVYRAEWNGSDVAVKVLTVQDFEDDQLKEFLREVAIMKRVRHPNVVLFMGSVTKRPHLSIVTEYLPRGSLYRLIHRPGSGEILDKRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWSGLCPAQVVGAVAFQNRRLAIPPNISPAMASLMESCWADDPSERPSFADIVDSLKKLVKSPVEVIKMADT 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02540 929 ProSitePatterns Protein kinases ATP-binding region signature. 665 686 IPR017441 GO:0005524
Pste2g02540 929 PRINTS Tyrosine kinase catalytic domain signature 884 906 IPR001245 GO:0004672|GO:0006468
Pste2g02540 929 PRINTS Tyrosine kinase catalytic domain signature 733 746 IPR001245 GO:0004672|GO:0006468
Pste2g02540 929 PRINTS Tyrosine kinase catalytic domain signature 840 862 IPR001245 GO:0004672|GO:0006468
Pste2g02540 929 PRINTS Tyrosine kinase catalytic domain signature 774 792 IPR001245 GO:0004672|GO:0006468
Pste2g02540 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Pste2g02540 929 SMART serkin_6 659 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02540 929 FunFam Serine/threonine-protein kinase isoform 1 649 737 - -
Pste2g02540 929 Gene3D Phosphorylase Kinase; domain 1 652 736 - -
Pste2g02540 929 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 237 918 - -
Pste2g02540 929 Coils Coil 198 218 - -
Pste2g02540 929 SUPERFAMILY Protein kinase-like (PK-like) 634 912 IPR011009 -
Pste2g02540 929 Pfam Protein tyrosine and serine/threonine kinase 659 913 IPR001245 GO:0004672|GO:0006468
Pste2g02540 929 CDD STKc_MAP3K-like 665 913 - -
Pste2g02540 929 Pfam Ethylene-responsive protein kinase Le-CTR1 253 444 - -
Pste2g02540 929 FunFam Serine/threonine-protein kinase CTR1 738 923 - -
Pste2g02540 929 MobiDBLite consensus disorder prediction 1 27 - -
Pste2g02540 929 Gene3D Transferase(Phosphotransferase) domain 1 738 926 - -
Pste2g02540 929 ProSiteProfiles Protein kinase domain profile. 659 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02540 929 MobiDBLite consensus disorder prediction 470 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02540 Pste-Chr2 25663633 25676868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02540 33 927 MAP Kinase Kinase Kinase AT4G24480 55.979 0.0 1009
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pste2g02540 PK_Tyr_Ser-Thr 9.4e-65 CL0016