Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02520 GCAGCGATGTCAGTCCTCTCTCGGGTCCGGCGGTACTCCACCGCTGTCCTCTCCCCGAACTCCTCAAGCCCGCTCACCTCGAAGCAGAAGTCCCGCGCCGCCCTCCACCTCCTCAAATCGGAGAGCAACCCCGAACGCATCCTCGAGATCTGCCGCGCCGCCTCCCTCAGCCCCGACTCCCACCTGGACCGGCGCGCCTTCTCCCTTGCCGTCTCCAAGCTTGCCTCGGCCAACCACTTCTCCGGCATCCGCAGGTTCCTGGAGGAGCTTAAATCCCGTAGCGACCTCTGCAACGAACAGTTCCTCTCCCACGCCATCGTCCTCTACGGGCAGGCCAAGATGCTCGATCACGCCCTCCGCACCTTCACCGACGACCTCTCTCCCCCTCGCTCCGTCAAATCCCTCAATTCTCTCCTCTTGGCCGCTATCCTCGCCAAAAACTACAAAGAGGTCTCTCGAATCTACCTCGAATTCCCCTCCAAATACTCCATTCAACCCAATGCCGACACTTACAACACCGTCATCAAGGCTTTCTCCGAATCCGCTTCCACCTCCTCCGTTTATTCCGTTTTAACGGAAATGGATAGGAACAACGTTAAACCTAACGTCACCACTTTGAATAATACGCTTTCAGGCTTTTACCGCGAGGAGAAGTTTGAGGAGGTGGGGAAGATGTTGAAGTTGATGGAGGAGAAGTATGGTGTTTTTCCTGCTATCAGTACTTATAATGTTAGGATGCTGAGTTTGTGTAAGTTGAAGAGGGCTTCTGAGGCAAAGGCTTTGTTTGATGGGATGGTTTGTAATGGTAGGAAGCCCAATTCGGTTAGCTACGCTTGTTTGATTCATGGCTTTTGCAAAGAGGGGGACCTTGAGGAGGCCCAGAGGTTGTTTAGGGACATGAAGAGGAGAGGCTTTTCCCCTGATGGGGACTGCTATTTTACGCTTGTTCACTTTTTCTGTCTCGCTGGGGACTTTCAGGCTGCCTTCCTCCTTGCTAAGGAGTCTATGGGTAAAGCTTGGGTGCCTAATTTTTCTACCATGAAGACTCTTGTCATTGGCCTTGCTTCTGTTTCCAAGGTTGATCTGGCCAAAGACCTTATTAGCCAGATCAAGGACAAGTTTCCTGATAATGCTCACAAATGGGATGAGATTCAAGCTCAATTGCCCCACATAGAAGACCAAATACGTAACGGAACTTTTAAGACAAAGAAAGAAGTAGAAAAGGTTGTCCAATCAGGTGCTAAATCAAAAGCATCCTCTTCCAAAGCAAAATCCGGCATAATTTCCAAAGGAAGGAGAACATTCAAATCAATAGCTGCAATTATGTCTCTCAAAACAGGTAGCAGCAGGAATAGACAAATAGAAGCAGAAATAAGAAAATATGGATCTGCAAGAAATGATGTGAAAGTATTCACATATGAGCAACTTGCTGAAGCGACAAACAAATATAGTTCTGATTGCCTGGTGGGCGAAGGTGGATTCGGAAATGTCTACAAAGGATACATTAAAAGTCTTGATCAAACTGTAGCTGTGAAGGTACTAAACAGGGAAGGAGTGCAAGGAACACGTGAATTTTTTGCAGAAATTTTGATGTTGAGCATGGTGCAACACCCAAATCTTGTGAGGCTTGTTGGTTATTGTGCAGATGACCATCATAGGATTTTGGTTTATGAATTCATGGCCAATGGGAGTTTGGAAAATCACCTTCTAGACATAGGTGAAAATAAGGAGCCTTTGGATTGGAAGACTAGGATGAAAATAGCTGAGGGAGCAGCAAGAGGACTTGAATATTTGCATAACAGTGCAGAGCCACCTATTATATACCGTGATTTTAAATCATCTAATATACTGTTAGATGAAAATTTTAATCCAAAGCTATCAGATTTTGGACTTGCTAAGATTGGTCCAAAAGATGGCGAAGAACATCTGACAACAAGGGTGATGGGGACTTTTGGCTACTGTGCACCAGAGTATGCTGCTACAGGTCAGCTTAGCACAAAGTCGGATATTTATAGTTTTGGGGTTGTGTTTCTGGAAATAATCACAGGCAGGAGAGTATTTGACACTGGAAGAGTTACCGCAGAGCAAAACTTGATTGACTGGGCACAACCATTGTTTAAGGACAGAACGAAGTTCACTCTGATGGCTGATCCTTTGCTTAAAGGTAAGTTCCCTGTGAAGGGCCTATTTCAAGCCCTAGCAGTGGCAGCAATGTGTCTTCAAGAGGAAGCTGACACCCGACCTTACATGGATGATGTTGTGACGGCTCTTACGCATCTAGCCGTGCACAAAGTTGGAGAACAAGACATAGCTGGTGAATCTATCAAATGTGCGGGGCATGTTGAATCTTTTAGAATTGCAAGTTCTGTTGGATCTGAAAGGAAGTAG 2388 0.4644 AAMSVLSRVRRYSTAVLSPNSSSPLTSKQKSRAALHLLKSESNPERILEICRAASLSPDSHLDRRAFSLAVSKLASANHFSGIRRFLEELKSRSDLCNEQFLSHAIVLYGQAKMLDHALRTFTDDLSPPRSVKSLNSLLLAAILAKNYKEVSRIYLEFPSKYSIQPNADTYNTVIKAFSESASTSSVYSVLTEMDRNNVKPNVTTLNNTLSGFYREEKFEEVGKMLKLMEEKYGVFPAISTYNVRMLSLCKLKRASEAKALFDGMVCNGRKPNSVSYACLIHGFCKEGDLEEAQRLFRDMKRRGFSPDGDCYFTLVHFFCLAGDFQAAFLLAKESMGKAWVPNFSTMKTLVIGLASVSKVDLAKDLISQIKDKFPDNAHKWDEIQAQLPHIEDQIRNGTFKTKKEVEKVVQSGAKSKASSSKAKSGIISKGRRTFKSIAAIMSLKTGSSRNRQIEAEIRKYGSARNDVKVFTYEQLAEATNKYSSDCLVGEGGFGNVYKGYIKSLDQTVAVKVLNREGVQGTREFFAEILMLSMVQHPNLVRLVGYCADDHHRILVYEFMANGSLENHLLDIGENKEPLDWKTRMKIAEGAARGLEYLHNSAEPPIIYRDFKSSNILLDENFNPKLSDFGLAKIGPKDGEEHLTTRVMGTFGYCAPEYAATGQLSTKSDIYSFGVVFLEIITGRRVFDTGRVTAEQNLIDWAQPLFKDRTKFTLMADPLLKGKFPVKGLFQALAVAAMCLQEEADTRPYMDDVVTALTHLAVHKVGEQDIAGESIKCAGHVESFRIASSVGSERK 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02520 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 273 307 IPR002885 -
Pste2g02520 795 PANTHER OS07G0668900 PROTEIN 423 766 - -
Pste2g02520 795 SUPERFAMILY Protein kinase-like (PK-like) 466 757 IPR011009 -
Pste2g02520 795 Pfam Pentatricopeptide repeat domain 134 178 IPR002885 -
Pste2g02520 795 Pfam Pentatricopeptide repeat domain 189 244 IPR002885 -
Pste2g02520 795 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 128 250 - -
Pste2g02520 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 238 272 IPR002885 -
Pste2g02520 795 ProSiteProfiles Protein kinase domain profile. 483 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02520 795 Pfam Protein kinase domain 486 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02520 795 FunFam serine/threonine-protein kinase PBS1-like 448 559 - -
Pste2g02520 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 167 201 IPR002885 -
Pste2g02520 795 Gene3D Tetratricopeptide repeat domain 2 230 IPR011990 GO:0005515
Pste2g02520 795 Pfam PPR repeat family 272 320 IPR002885 -
Pste2g02520 795 Gene3D Transferase(Phosphotransferase) domain 1 560 776 - -
Pste2g02520 795 Gene3D Tetratricopeptide repeat domain 231 444 IPR011990 GO:0005515
Pste2g02520 795 NCBIfam pentatricopeptide repeat 275 308 IPR002885 -
Pste2g02520 795 NCBIfam pentatricopeptide repeat 170 203 IPR002885 -
Pste2g02520 795 NCBIfam pentatricopeptide repeat 241 273 IPR002885 -
Pste2g02520 795 FunFam Serine/threonine-protein kinase PBS1 560 774 - -
Pste2g02520 795 ProSitePatterns Protein kinases ATP-binding region signature. 489 512 IPR017441 GO:0005524
Pste2g02520 795 CDD STKc_IRAK 489 760 - -
Pste2g02520 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Pste2g02520 795 Gene3D Phosphorylase Kinase; domain 1 445 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02520 Pste-Chr2 25469227 25481291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02520 469 766 Glycoside Hydrolase AT3G07070 60.738 1.02e-131 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste2g02520 Pkinase 7.8e-48 CL0016