Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02518 CTTTGAAGGGTTAATTTGCAGGAGGCACTTCTTAGTGTTCTTTTCTGTCTCTCATCACTTTATTGTTAGGGATTAGTAATTTTTCCCGTCTAAAACCAAGGGCACTGTTTTGTTCCTTTTCTTCTTCTGGGAAGGAAGGAACAAAAGGCATAAGACGTACCAATGCCGGAGAAGAAGAACAAGAAAATCTTTTTCACAGAAGAAGACGCTGTCTCCGTTTTGCAAAGGTACAATACAACTACTGTGTTCACTTTACTTCAAGAAGTGGCGCATTACCCTCGACCAAAGATTGACTGGACTGAGTTGGTGAAGAAAAGCGCGACTGGGATTTCTAATGCTAGGGAGTATCAAATGCTGTGGCGGCACCTGGCATATCGCCATTCCTTGCCTGACAATTTTGAAGAAGAAGATGGGGCAGAACCTCTGGATGATGATAGTGACCTAGATTGTGAGCTAGAAGCATTACCTCCTGTTAGTGTGGAATCTGCATCAGAGGCTGCTGCATGTGTGAAGGTTATGATTACTTCTCGTACACTTAGTGAATCTACACCTAGTAGCTCAACGATTGAGGCTCCATTGACTATAAATGTTCCAGTTTTCCATTCGTCTAGAACTCCTATTGAAAGTTCACAATCCTCTAATATGATGCAAGGGACAAGCATTATTTTTCCGGTTACTGTTCAGAGACAGACATTGCCAACTGTATCATCAACAGATGGTATAGAAACCAAGGGATTAGTTGTTGGTAACATGGCTTCGAAAAGAAAAAGAAAGACATGGTCAGAGGAAGAGGACATGCAGCTACGAGCTGCTGTTCAGAGGTGGGGTGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAACTTTCCTATTAAGAGAAGTCCCACGCAGTTGGCTCAGAGGTGGAGCATCTTACGAAAGAAAGATGGTAGTGCCAATACAGGAACTATCTCAACCAGCACACAGTATACTACTGCCGAACAGCTGGCAACTAGACATTCTTTATCTTTAGCCCTTGATATGCCATTCAAAAAGTTAACTGCCCCTGGAATGATAGATGCTAAGACATCCACATCAATTAAAAATCAAGTGCAGATTAGAAATCCTACAAATGCTATAGAGAAGGTTGCCAGTAGTTTTGTACCACCTCAACAAGCTTTGTTGGGATCTTCTGATTGTCATGCAAAATCCAAATTAGCAGATGAAAAACCAGTCTTGAAGGGTAATCTAATTTCAGACCCTGTGGTAAAATCTACCACAGCAGCTTTGGGGGCACGACTTGATTCCCTTTCAAATACTATATCACAAAGTAAAGTTGCTCAAATAAAAAATGCAGTAGATACCAAGCCTGCTGTTACCCCTTTGACTAAGCCATCCATTTCTACCAATTTGTCTTCTGACCCTAAGAACAAACATGTTTCCCCTCTGGCTGATAAAGTTGCTCAAGTAAAAACTTCTGTGGATACTAAGCCTGCAGTTAGCTCTTTGGCAAAACCATCCATTTCTACGAATTTGCCTTCTGACCCAAAGAACAAAAATATTACTCCTTTGGCTGATAAAGTTCCATTGAAGCAAGATGTTAATCCCAGAAAAGAGTCTAGAGTTTCTGATCCCAGCTCCACACCAAAAGAGACTGTACAAGAAAATGAGCCTCCAAAAGTTACTATTGGAAGCCAGGTTGATAGCAGCCTAGAGAAGGGAAGATTAGATGAAGGTCAAGAGAAGAACAAGCCTCTGGTTAAAACTAGTGGTGGTGAGGAAATTTCAAAAGATAAAGCAAATCCAGTAGCATGTGAAGAGCAAGGAAGTGTTAAGAAGGCCACTGAGAATAGCAACCTCGAAAAGGGGAGTCAAAATTCAGACCAAGACAAGAAGATAGATTCAGTTAATCAAAGTTCAAACAATCAAAACGTGAATGACAAACATGTAAATTTGCAGATACAAGAAGAAAGCAGTCAAAGTGCCAAGGTAGTAAAAACTGATGGGGAATGTTGAGCGATTAGTTTGTGAAAATTAGTATTTTTTAAATTTTTTTTATTGAATTCTAACTTAAAGTTTTGATGAAGTTTGAAGTTATTTTAGGAATTTGTAGCACATTAATATATTGTAATATTTCCTTAAATTTTTTTTTTGTGGTAAATATATTTGATGCCTTGAAAATTTTTATAAGATGGGTA 2177 0.3941 MPEKKNKKIFFTEEDAVSVLQRYNTTTVFTLLQEVAHYPRPKIDWTELVKKSATGISNAREYQMLWRHLAYRHSLPDNFEEEDGAEPLDDDSDLDCELEALPPVSVESASEAAACVKVMITSRTLSESTPSSSTIEAPLTINVPVFHSSRTPIESSQSSNMMQGTSIIFPVTVQRQTLPTVSSTDGIETKGLVVGNMASKRKRKTWSEEEDMQLRAAVQRWGEGNWATMAKGDNFPIKRSPTQLAQRWSILRKKDGSANTGTISTSTQYTTAEQLATRHSLSLALDMPFKKLTAPGMIDAKTSTSIKNQVQIRNPTNAIEKVASSFVPPQQALLGSSDCHAKSKLADEKPVLKGNLISDPVVKSTTAALGARLDSLSNTISQSKVAQIKNAVDTKPAVTPLTKPSISTNLSSDPKNKHVSPLADKVAQVKTSVDTKPAVSSLAKPSISTNLPSDPKNKNITPLADKVPLKQDVNPRKESRVSDPSSTPKETVQENEPPKVTIGSQVDSSLEKGRLDEGQEKNKPLVKTSGGEEISKDKANPVACEEQGSVKKATENSNLEKGSQNSDQDKKIDSVNQSSNNQNVNDKHVNLQIQEESSQSAKVVKTDGEC 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02518 610 ProSiteProfiles Myb-like domain profile. 198 252 IPR001005 -
Pste2g02518 610 MobiDBLite consensus disorder prediction 510 540 - -
Pste2g02518 610 SMART sant 202 254 IPR001005 -
Pste2g02518 610 MobiDBLite consensus disorder prediction 433 457 - -
Pste2g02518 610 MobiDBLite consensus disorder prediction 397 421 - -
Pste2g02518 610 MobiDBLite consensus disorder prediction 400 416 - -
Pste2g02518 610 MobiDBLite consensus disorder prediction 433 610 - -
Pste2g02518 610 Pfam Myb-like DNA-binding domain 203 248 IPR001005 -
Pste2g02518 610 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 601 - -
Pste2g02518 610 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 256 IPR017930 -
Pste2g02518 610 MobiDBLite consensus disorder prediction 485 508 - -
Pste2g02518 610 CDD SANT_TRF 204 253 - -
Pste2g02518 610 MobiDBLite consensus disorder prediction 550 604 - -
Pste2g02518 610 Gene3D - 195 258 - -
Pste2g02518 610 SUPERFAMILY Homeodomain-like 201 254 IPR009057 -
Pste2g02518 610 MobiDBLite consensus disorder prediction 470 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02518 Pste-Chr2 25444084 25453097 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste2g02518 Myb_DNA-binding 2.5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02518 2 25444084 25453097 Pste2g02518 2 25444084 25453097 ECH
Pste8g01777 8 12135622 12145493 Pste2g02518 2 25444084 25453097 PCT