Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02508 CTTGAAGGGTTGGATCTTGCTACCAACCGTCCTAGCTAAAAACGTTAGTTTTAGATTTATAGTAGCCGCCTCTCTCTAAGTGGTTACACGTTCAGGAATAACCATGATATCTTCAATGAAGTACATGGCATCACCTCTCACATCTTCTGCTGCTTTCTCATGCAGAAAGGTCACATTAGCCACCAACAGCATCAGCATTAACGTTGACCAAAAACAACCTCAGTTGTGTTCCCTCTACCTTGCATCAACCTGTAACTTGGGATTGGTGAGGAGAAGGAGAGTGACAGAGTGCCAGGCCTATGAAGCTGACAGGTCAAGGCCACTGGAGATTAACATTGAGCTGCCAGCTGGTGAAGAGGCAGCTCACAAGTTCAAGATTGGGGTGTATTTTGCTATCTGGTGGGCTTTGAATGTTGTGTTCAACATTTACAACAAGAAGGTTTTGAATGCTTTTCCTTACCCCTGGCTCACCTCCACTTTGTCCCTTGCTGCTGGCTCCCTCATCATGTTAATCTCTTGGGCCACCACCCTCGCTCCCCTCCCATTACTTAACTTCCACTTCTTCATCGCCTTGTTTCCCGTTGCGGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAGGTTGCTGTTTCATTCACTCACATCATCAAGAGTGGAGAGCCAGCTTTCAGTGTCCTGGTGTCAAGGTTCTTGCTTGGAGAAGCATTCCCAGTGCCGGTTTACCTGTCACTTGTGCCAATTATTGGTGGTTGTGCACTAGCTGCTATAACGGAGCTCAATTTTAATATGATTGGCTTTATGGGAGCTATGATATCAAATTTAGCATTTGTCTTCCGGAATATATTCTCAAAGAAGGGGATGAAAGGGATGTATGTTAGTGGAATGAACTATTATGCTTGTCTTTCCATGATGTCTCTATTGATTCTCACACCTTTTGCCATTGCCGTAGAGGGCCCCAAGGTTTGGGCTGCTGGCTGGCAAACAGCTGTGTCTCAGATTGGTCCCAATTTTGTATGGTGGGTAGCAGCCCAGAGTGTGTTCTACCACTTGTACAATCAAGTCTCTTACATGTCTCTCGATCAGATTTCCCCCTTAACATTCAGCATTGGAAACACAATGAAGAGGATTTCAGTCATCGTAACTTCCATCCTTATCTTTCACACGCCTGTTCAGCCCATTAATGCTCTTGGTGCTGTCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCAGATCATTCCTTCATGGTGAAGGATGCAACAGTGTTAGATGCATCAGGGTGGCGAAGAGTAAGTAACAAAGACAATAGTGGTGATGGTAGTAGTAATGATGATGAGGCTCATCATCTCCCCAACGTGGACGTGGTAGAACACTTCCGTATTTCCCTCGTCACACCATGGACAAGCAGCATCCGCGTCGCATAA 1438 0.459 MISSMKYMASPLTSSAAFSCRKVTLATNSISINVDQKQPQLCSLYLASTCNLGLVRRRRVTECQAYEADRSRPLEINIELPAGEEAAHKFKIGVYFAIWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMLISWATTLAPLPLLNFHFFIALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPVPVYLSLVPIIGGCALAAITELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMYVSGMNYYACLSMMSLLILTPFAIAVEGPKVWAAGWQTAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVTSILIFHTPVQPINALGAVIAILGTFLYSQADHSFMVKDATVLDASGWRRVSNKDNSGDGSSNDDEAHHLPNVDVVEHFRISLVTPWTSSIRVA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02508 444 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pste2g02508 444 PANTHER SOLUTE CARRIER FAMILY 35 91 382 - -
Pste2g02508 444 SUPERFAMILY Multidrug resistance efflux transporter EmrE 282 382 - -
Pste2g02508 444 Pfam Triose-phosphate Transporter family 91 379 IPR004853 -
Pste2g02508 444 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 91 384 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02508 Pste-Chr2 25368319 25377236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02508 34 382 Antiporters AT1G61800 79.083 0.0 549
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02508 2 25368319 25377236 Pste8g00509 8 2640673 2644089 ECH
Pste2g02508 2 25368319 25377236 Pste2g02508 2 25368319 25377236 ECH