Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02507 ATCGGATTTGCCCTGCATTCTCTCATTCCTTACCTCTTTCTCTCCCTTGTATAATTCTTTTCTTTGACCCTTTACACAGTCTCAGCTCCATTTTTGGGGTTTTTCTCTTCTTCCTCTTCGCCATAAGCCATTCTCCTTAACACACCACACTGTGCCGCTAGCCATGTCAAATTTTACCTCTTCTTCATCATCTCTGTCACACATTTCTTCTCTTTCTTCTTCTGCACCTTTCGACGACTCTTCAGAAGACTCCTGCAGTATATGCTTAGAGCCCTTCACCCTCCATGACCCTTCAACTGTTACCTGTTGCAAACATGAATATCATCTGCATTGCATTCTTGAATGGTCACAAAGAAGCAAAGAGTGCCCAATATGTTGGCAATCACTTGCTTTGAAAGACCCTGCGAGCCAAGAGCTTCTAGCTGCAGTGGAAGATGAGAAACGCATGAGATCAAGAAACATAACTAATTCTCGTGGCCCCCTTGAACAGCTTAATGACAGCCATGTAAGATATCTAAGAATTGATCTTTATGGAACTGTTTTGTTGATCTACCGGTCTTTGTTTCCTTCATTCAATAATCAGATGCAAATTATTCCATTGCAGGATGATTCTTGCTCAGATGACTCTGATTTTGATGATCAGATAACGAGGCGCCTAGTTGCTGCCGCAAGTAGAGCTCGTTTTGTTCAGAGACAACACAGGAAGAGATCCCCTGGTGCTGGTCCATCTGAGGGTCTTGGTGTTGACTCTTCCGTGCATGTATCTGGGGTGCAAACAGCACTTAGAACTTCATCAGCTTCTGGTGTTTCATCTACTGTTATTGAACCTCTGGCATTGAATAATACTCCTGGGAGTGCAAGGAGACCAAACACTTCCGAGATGTTTTCCTTGCCTGAGTCCTTCAAATCCAAATTTTCTGCTGCTTCAGCCAGATATAAGGAATCAATTTCAAAAGGTACCCAGGGGCTTAAAGAAAAGTTACTTGCTCATAATGTATCAGTAAAAGAGCTGAGTAAAGGTGTTCAGCGCGAGATGAATGCAGGCATTGCTGGAGTTGCACGGATGATTGAACGCCTTGATCTTTCCTCAAAACGCTCCAGTTCTCCTCTCATTCATGTCCATAATGGAGAAACTTCAGACTTACACGAAGAAGAGAATTCTGTTGAAGAGAATGGCATTGGGGGTTCTCCTATTAAAGAGAGTGGAGATGCAGTTCACTCAGATGTTCCACCACTTGTTACTAACATGCAATCTTTTCGAATTAAAATTCCTCCATTTGTTCAGAGTGGAAATGATGTTGTGAAGACTTAGCTCGTGGTCATCATCAACTTTATTTATTATGCTGTGTCTCCATTGTCCAAGAAGTGCAAGAGACGCCTCTGATGACCAATGAACCCGTTGGTATGCGTCCTGCATTGTTATTCAATGGTCAACTCGTAGGAATTAAAAATTGGAAGATTATTTAATGCATCTTTCTGATAGTTCATGGTTTCTCATCCATGATTACCCTTTTACATGCCAATACTTTATTCGCGTTAATCAAATAATTT 1551 0.4178 MSNFTSSSSSLSHISSLSSSAPFDDSSEDSCSICLEPFTLHDPSTVTCCKHEYHLHCILEWSQRSKECPICWQSLALKDPASQELLAAVEDEKRMRSRNITNSRGPLEQLNDSHVRYLRIDLYGTVLLIYRSLFPSFNNQMQIIPLQDDSCSDDSDFDDQITRRLVAAASRARFVQRQHRKRSPGAGPSEGLGVDSSVHVSGVQTALRTSSASGVSSTVIEPLALNNTPGSARRPNTSEMFSLPESFKSKFSAASARYKESISKGTQGLKEKLLAHNVSVKELSKGVQREMNAGIAGVARMIERLDLSSKRSSSPLIHVHNGETSDLHEEENSVEENGIGGSPIKESGDAVHSDVPPLVTNMQSFRIKIPPFVQSGNDVVKT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02507 382 ProSiteProfiles Zinc finger RING-type profile. 31 71 IPR001841 -
Pste2g02507 382 MobiDBLite consensus disorder prediction 313 354 - -
Pste2g02507 382 MobiDBLite consensus disorder prediction 174 195 - -
Pste2g02507 382 SUPERFAMILY RING/U-box 23 78 - -
Pste2g02507 382 FunFam E3 ubiquitin-protein ligase RHF1A 16 83 - -
Pste2g02507 382 SMART ring_2 31 71 IPR001841 -
Pste2g02507 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 103 IPR013083 -
Pste2g02507 382 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 19 80 - -
Pste2g02507 382 Pfam Ring finger domain 29 71 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02507 Pste-Chr2 25345951 25348785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02507 25 79 C3H Transcription Factor Family AT4G00335 45.455 2.65e-12 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02507 2 25345951 25348785 Pste2g02507 2 25345951 25348785 ECH