LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g02504	AATCCCGTTAATCAGCGCTTTACAGCAACAAACACATACCCAGTTTGCCTTTTCAACGCCGTCGTTCTTCAAATACTTGTATTCAACAACCCCTCACAACTCAATTCTCTTTTCTCTCCCGGAACAAGGACCCTATACTTTCTTTTTTCCGGAACCTCCTCCCTTCTTTTCCGACTCTATTTACCTTTTCTCCCTCCAATCTTGGATTCATTTCACTATCATCGTTCTGCTTCGTATATCTCATTTCTCTATTCCTTCCTTTTTCTCAACACTCCTCAGCATCTTCCATTAATTTCTGGTTTTGTTTCTTCCTTTTGCTCGCTCTCAAGTTTCGTTTTCCATTTCGAGAAACGTGTTCTTTTTTGTGTAATTCCATTGAGGCATTGGGTTGAAGGGGGGGAACTAGTTTTCAACTGTGAACTGGCTGCATTACCTTGTACGGCAATCTCAACAATGGTCTGCCGCCCAGGCTCAACGCAATTGTCTCGTGACGTTAGGCTCAACAGTAATATGGGATTCTGTAGTTTCCATCATAATCCGATGGGGGTTGGTCGATTACATTTGGTCACCATAAATCTTTCACCATGTAGTTTGAAACAAGATTCCTCAGCACTCCATCTGTTAAGTAGACTACATGCCCCAATAAGGCGTGTGCCTTCAAGATGTAATGGTTTCATATGTCGGTCTGTCCTAATGCCAGGTGGAGGGAGTGGGACTCCACTCATGAAATCTGCTAGTGTTATTTTAACCAGGTCATATGATGCTTTACAAGGAAATCCTATTTTGCTCCAGCTGATCCCTGCCCTTGGTATCATTGCCTTTGCTGTTTGTGGTCTTGAGCCACTCCTTCGTCTCTACAGGGTTTTGTTTCTTCAAAGTAGTGACAGTAGTTGGAAGAAAAGTAGCTCTCAATACATTATGACATCTTATTTTCAGCCATTGCTGTTGTGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCTCTAGTTCTACCATCTGAGTCCAGCCAGGCTGTGAAGCAGCGGCTGCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCTTTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCACAAAAATTCTTTCTGGAGGCAAATGACTCCAGTGGTGCAAGAAATATGGGCCTTGATTTTGCTGGGAAGGCAGTATATACAGCTGTATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGTTAGGTTTCTCCACACAGAAGTGGTTAACTGCTGGTGGTTTGGGCACTGTATTGCTCACTCTTGCAGGTCGTGAGATATTTACAAACTTTCTTTCAAGCATAATGATCCATGCCACTCGGCCATTTATTGTCAATGAGTGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGCACAGTTGAGCATGTAGGCTGGTGGTCACCAACCATCATTAGAGGTGATGATCGGGAGGCAGTTCATATTCCTAACCATAAGTTTACTGTAAATGTTGTGAGAAATCTGAGCCAGAAATCTCATTGGCGTATCAAGAGTTACATTGCCATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAAGTTTTGTCTAAAAATCCTCAAGTAGAGCAGCAAAAATTGCATAGAAGGGTCTTTTTGGAGGATGTCAATCCTGAAAATCAGGCTCTTAAGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTTGTTAGTCATCATAGAGCCCGGCTAGCCACTCCCATTCGCACAGTTCAGAAAATATACAGCGAATCTGACTCAGAAAATATTCCCTTTGGGGACACCATTTTCACTCGGTCTAGAGCGGAAAATCGCCCATTCCTACTGATAGAACCACCATATAAAGTTAATGGTGAAGATAAAGTTAAAACTTCAACACGTTCTACTCGTGCAAATGAGGAAAAAGATTCCAAGATTGATGAAACCACGGCGACTGATACCAAAGGAAATGAGAATTTTGCAGCAACATCAACCTCCTCACCTGATGTAAATTCTAGGGATAAATCCAAATCATTTTCTGAAACTCAGTCTAAAAAGGAAAATGCCGTAGATGCGGGAAAGGGAAGTACAGCTCCTGTATCTAAAAATGTTGTTCAAAATGCTGTGCCTGAAACCTCTCCCGTTACTTCCCGCGAGATCACCACTTCTATGCAGTCAAAGCAAGATGAAGACAAATCTTCTGTCTCATTGTCGTCAGTTAGGCCTTCCTTGGAAGAAAACATTCTTCTTGGGGTTGCCTTAGAAGGCTCAAAACGAACTCTTCCAATTGAGGGAATTGAGGAAGAAATGACTCCATCTCCTATGCCTGCAGAGTCACAAGAATTTGCTGTCCAACGGAATGGGGGTGGACCTCCTGCTAGCAAAGATAAGAAGGATGGTCAATCTTCATTTCCATCTGTTTTCTTCCCTGCTGCTAACGTTACCTTCTTAAAGTCGTTTCCATCTACACTTATCGTTTATACGATGTCGTTCTCGTCGCATGACCTTGGTCTTCACTTTACTTCAATTAAATTGTCTCGCGATATTCGGTTACACAGTAATCATGGAAACTCTAGTTTTTGTCATAATCCTATGCGTGGTGATCGAGTATGTGTTGTTGCCATAGGTCTTTTGCCGCATGGTTTGAGGCAGGATTCTTTGGCACTCTTATCCAGATTGCGTGCGCCTGTACGTATGAAATGTAATTCTTTGCTGTGCCGGTGTTCCCTAATGCCAGGTGGAGGATGTGAGGCTTCATTTCTCAAAATGGCTACTGTTTCTTTGTCAAGGTCATATAATCCTGTAGCAGGAAAACCAAGTGTGATTCAATTCATCCCTGCCATTGGTATCATCGGCTTCGCTGTTTTTGGTCTTGAGCCACTCCTGCGCCTGACTAGGCATCTGTTTCCCCAAGACAGGACTGATAGGAGTTGGAAGAAAAGTAGTTCACAGTATATTTTGACATCTTGTTTTCAACCTTTGCTGCTTTGGACTGGGGTAATGCTCATCTGCAGGGATTTAGATCCACTAGTCCTACCATCAGAAACCATTCAGGCTATGAAGCAACGGCTGCTGAGTTTTGTAAGATCTTTGTCAACCGTGCTTACATTCGCTTACTGTTCTTCAAGCTTAATTCGACAAGCACAAAAATTTTGTATGGAGACAAATGATTCCAGTGATGAAAGAAATATGAGCATTGATTTTTCCGGGAAAGCTGTATATACTGCAATATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTTTCTCCACACAGAAGTGGTTGACTGCTGGTGGTTTGGGCACAGTTTTGCTTTCCCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTATAATGATTCATACAGCTCGGCCATTTGTTGTGAATGAACGGATTCAAACAAAAATTAAAGGATATGAGGTTACTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAGTTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCATCTTGCTATCAGTCACTTGGATGTTAACAAGATTAACAGTATTATAGCTGATATGCGCAAGATTTTGGCCAAAAATCCTCAAGTAGAGCAGAGAAAATTGCACAGAAGGGTCTTTCTAGAGAATATTGATCCAGAAAATCAGGCTCTCATGGAGGCAATCCTCTTGGATCTTCTCAGAGTTATCAGTCATCATGGAGCTCAGCTAGCCACACCCATCCGAACAATTCAGAAGATCTGCAGTGATACTGATTTAGAGACTGATCCATTTGATGACACCATTTCCACCCGATCCAGATCAAAGAAAACCCGTCCTTTCCCACTGATAGATCCACCTTACAAAATTAAGCCTTCAACTATTACAAATGAAGACAAAGATACCAAGATAGATGAAACTTTGCCATCTGACATCAAAGTAGAACGTGACGAAGTTGCTGTGACATCGAGTTCAGTCCAAAAGACTTCCAAATCCCAAAAGCTCAGAAAGGAAAGACCAAGAAGTGCAGGAAAGGGAACAGCACCCAAAATTTTGTCAACATCCAATGAGTTGGGTTCTGGAGAAACTATTTCACCTTCATCAAAGCTCGATGAAGAGAAATCTGTTGTGTCATCATCATTGGTTAGTTGTTCTTTAGAAGAGAATATTGTTCTTGATGCTGCCCTGTTGGGCTCGAAGAGAACTCTTCCAATTGATGAAGAGTTGATCCAATCTATCCCTGCAGAACCACAAGAAGTTGCAGTCCATCAGAATGGGAGTGAACCTCCTATTTGCAAGGATAAGAAGGATGATGAAATGTCTTCATTTCCTACTGCTAAACAAAAGGATAAGGCGGATGGGCAGAAGAGTAGATATTAATGTTTAGATAGATTAGATGGCTTTTGTTGTAGTTACACAAAAATGATCTAGCTGTCTTTTTTAAGCTGGGCATTGTGCATTGTATCATCCATTTGTATATTAGTGGGAATGAATTCTCTCATGTACATTACAAATTAAGTTCAAATCTTTACGTCTA	4660	0.4135	NPVNQRFTATNTYPVCLFNAVVLQILVFNNPSQLNSLFSPGTRTLYFLFSGTSSLLFRLYLPFLPPILDSFHYHRSASYISFLYSFLFLNTPQHLPLISGFVSSFCSLSSFVFHFEKRVLFCVIPLRHWVEGGELVFNCELAALPCTAISTMVCRPGSTQLSRDVRLNSNMGFCSFHHNPMGVGRLHLVTINLSPCSLKQDSSALHLLSRLHAPIRRVPSRCNGFICRSVLMPGGGSGTPLMKSASVILTRSYDALQGNPILLQLIPALGIIAFAVCGLEPLLRLYRVLFLQSSDSSWKKSSSQYIMTSYFQPLLLWTGAMLICRALDPLVLPSESSQAVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLEANDSSGARNMGLDFAGKAVYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLEDVNPENQALKILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSESDSENIPFGDTIFTRSRAENRPFLLIEPPYKVNGEDKVKTSTRSTRANEEKDSKIDETTATDTKGNENFAATSTSSPDVNSRDKSKSFSETQSKKENAVDAGKGSTAPVSKNVVQNAVPETSPVTSREITTSMQSKQDEDKSSVSLSSVRPSLEENILLGVALEGSKRTLPIEGIEEEMTPSPMPAESQEFAVQRNGGGPPASKDKKDGQSSFPSVFFPAANVTFLKSFPSTLIVYTMSFSSHDLGLHFTSIKLSRDIRLHSNHGNSSFCHNPMRGDRVCVVAIGLLPHGLRQDSLALLSRLRAPVRMKCNSLLCRCSLMPGGGCEASFLKMATVSLSRSYNPVAGKPSVIQFIPAIGIIGFAVFGLEPLLRLTRHLFPQDRTDRSWKKSSSQYILTSCFQPLLLWTGVMLICRDLDPLVLPSETIQAMKQRLLSFVRSLSTVLTFAYCSSSLIRQAQKFCMETNDSSDERNMSIDFSGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLLSLAGREIFTNFLSSIMIHTARPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIVRGSDCEAVHIPNHNLSVNVVRNLSKKSHWRIKTHLAISHLDVNKINSIIADMRKILAKNPQVEQRKLHRRVFLENIDPENQALMEAILLDLLRVISHHGAQLATPIRTIQKICSDTDLETDPFDDTISTRSRSKKTRPFPLIDPPYKIKPSTITNEDKDTKIDETLPSDIKVERDEVAVTSSSVQKTSKSQKLRKERPRSAGKGTAPKILSTSNELGSGETISPSSKLDEEKSVVSSSLVSCSLEENIVLDAALLGSKRTLPIDEELIQSIPAEPQEVAVHQNGSEPPICKDKKDDEMSSFPTAKQKDKADGQKSRY	1500

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	1389	1413	-	-
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	697	711	-	-
	Pste2g02504	1500	Gene3D	-	314	448	-	-
	Pste2g02504	1500	Gene3D	-	1049	1151	-	-
	Pste2g02504	1500	Gene3D	-	450	505	IPR023408	-
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	648	763	-	-
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	722	763	-	-
	Pste2g02504	1500	SUPERFAMILY	Sm-like ribonucleoproteins	1137	1207	IPR010920	-
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	1303	1413	-	-
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	1457	1500	-	-
	Pste2g02504	1500	SUPERFAMILY	Sm-like ribonucleoproteins	434	504	IPR010920	-
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	676	696	-	-
	Pste2g02504	1500	Pfam	Mechanosensitive ion channel	391	598	IPR006685	GO:0016020\|GO:0055085
	Pste2g02504	1500	Pfam	Mechanosensitive ion channel	1094	1257	IPR006685	GO:0016020\|GO:0055085
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	648	675	-	-
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	1335	1359	-	-
	Pste2g02504	1500	PANTHER	OW CONDUCTANCE MECHANOSENSITIVE CHANNEL	157	825	IPR045042	-
	Pste2g02504	1500	MobiDBLite	consensus disorder prediction	1470	1500	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g02504	Pste-Chr2	25322196	25339077	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g02504	152	807	Mechanosensitive Ion Channel Family	AT1G58200	56.076	0.0	746

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste2g02504	2	25322196	25339077	Pste2g02504	2	25322196	25339077	ECH