Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02484 AAAAGTGGAAGGGGAAAAGAAAAAGTGGTCGTATTAGTGTTATGGGTTTTGGCGCCCCATGTGTTCCATTTCCCATCCCCCATCTCTTTTTTCAAATTCTCCATCACTCTCTCTCATTTCCCAATTCTCATGGGCTACCTCTCTTGCAATGCAGAGTCCGCCATCGCCACCTGCGATCCCCACTTCAAGAAGCTCAAACCCCCCGCCGCCGCAACAAAAATCAGACACTTTAACTACACCGACATCGTGGCCGCCGCCAACGGCTTCTCCCCCGACACCTTCCTAGGCCGAGGCAGCCACGGCAGAGTGTACAGAGCCACCTTCGACGGTGGCAAACTCCTCGCTGCCGTCAAAACCACCAAACATAACACCGCCTCCAATATCAAATGCAGCAGCCCCGCCGAAAACGAGATCGAGATCCTCTCCCAAGTCCCCAGTCCCCGCCTCGTAAACCTCATCGGCTTCAGCACCGACCCTAACGGCAACAAATTAATCGTCGTCGAATACATGCCCAACGGTTCGCTCCACGATCTCTTACACGCAACTAAAAAACCGCCAGGTTGGAACCGTAGGGTCCGGTTAGCGCTTCAGGAATGGAACGCCAGGCTCGGTGACTTCGGCCTCGCCCTCAGGGGACACGTGGAGGACGTTCGCGTTAAGTGCACTCCACCCGCCGGGACGTTAGGCTACCTCGACCCCTGCTATCTTGCGCCCGAGGATCTCACCGCCAAGAGCGACGTCTTCAGTTTCGGGATCTTGCTGTTGGAGATCATCAGCGGCCGGAACGCCATCGATGTTAATTACAGTCCTCCCTCCGTCGTCGACTGGGCGGTCCCGCTCATTAAACTCGCCGACTACCCCGGTATCTGCGACCGCCGGATCCCCCCGCCTCCCGAACCCGCCGTCGTCCGCCTGCTTGCGGTGCTGGCCGCGAGGTGCGTCAGGTCCACAGCCGAGAAGCGCCCCTCCATGGCCGAGGTCGTCGAGTGTCTTAATCTCGCCAGAAAGAGGATTCGTGCCTCGCCCATTTGGAAGAATCTGCGGCGGCGCGTGGCGCGTGTCGATAGCTCGGTGCCCGTGGTGGCGTTGGAGGAGTGCGATGAAAATGATGGTGTGAGGATAGGGAAAGGGTATGGGAGTGAGCCCCCCAATAATAATAAAGTGATGCGGTCAAAGTCCAGTGGTTCTGGTTATGGGTCGTTGAGAGGAAGTTGGGTCAAAATGCAGGCGCACCAAAGCGAGCATGGATTAGGGAGAAGGAAGGTGAAGCTAAAACAGTCAAAGTCTATGGGGGTTTTGCAAGGCTCTGTGCTATTACATAACAATAACAATAACAATGCCAATAATAATGATGTAGTAATTGGTTTGGAAATGGGCCAGTTTGTTCTTAGGGAGGAGAGAATGGTGGAAAAA 1413 0.5513 KSGRGKEKVVVLVLWVLAPHVFHFPSPISFFKFSITLSHFPILMGYLSCNAESAIATCDPHFKKLKPPAAATKIRHFNYTDIVAAANGFSPDTFLGRGSHGRVYRATFDGGKLLAAVKTTKHNTASNIKCSSPAENEIEILSQVPSPRLVNLIGFSTDPNGNKLIVVEYMPNGSLHDLLHATKKPPGWNRRVRLALQEWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLTAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIKLADYPGICDRRIPPPPEPAVVRLLAVLAARCVRSTAEKRPSMAEVVECLNLARKRIRASPIWKNLRRRVARVDSSVPVVALEECDENDGVRIGKGYGSEPPNNNKVMRSKSSGSGYGSLRGSWVKMQAHQSEHGLGRRKVKLKQSKSMGVLQGSVLLHNNNNNNANNNDVVIGLEMGQFVLREERMVEK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02484 471 Gene3D Transferase(Phosphotransferase) domain 1 198 346 - -
Pste2g02484 471 Gene3D Transferase(Phosphotransferase) domain 1 75 197 - -
Pste2g02484 471 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Pste2g02484 471 SUPERFAMILY Protein kinase-like (PK-like) 74 347 IPR011009 -
Pste2g02484 471 PANTHER OS01G0253100 PROTEIN 197 333 - -
Pste2g02484 471 MobiDBLite consensus disorder prediction 374 396 - -
Pste2g02484 471 Pfam Protein tyrosine and serine/threonine kinase 200 331 IPR001245 GO:0004672|GO:0006468
Pste2g02484 471 Pfam Protein tyrosine and serine/threonine kinase 94 197 IPR001245 GO:0004672|GO:0006468
Pste2g02484 471 ProSiteProfiles Protein kinase domain profile. 89 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02484 Pste-Chr2 25109711 25111450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02484 73 342 Receptor kinase-like Gene Family AT3G59420 35.197 5.20e-49 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pste2g02484 PK_Tyr_Ser-Thr 9.9e-09 CL0016