Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste2g02458 | TGTGCCATGGCTTCAGTTGCATTCAGAAACCTAAATGCTAAGCGCTCCCTCTTCTCTTTGCATTTCGCCAATGCTTACCATTCACTTTCTCGTGAAACTTGCACCACACTCCAAAACTGCTATGCGCCCTCTTTGGCTCTCGTTTCTCTACGGAGATTCATGGCCACTTTCTCTCGAACAAAGCCTCACCTTAACGTGGGCACAATTGGGCATGTTGATCATGGGAAAACCACACTAACTGCTGCAATTACCAAGGTGCTAGCTGAAGAAGGTAAAGCCAAGGCCATTGCTTTTGAGGACATAGACAAGGCTCCTGAGGAGAAGAAGAGAGGAATTACTATTGCTACTGCTCATGTAGAGTATGAGACAGCAAAGAGGCACTACGCCCATGTTGATTGCCCAGGACATGCAGACTATGTTAAGAACATGATAACTGGAGCTGCACAAATGGATGGCGGAATTCTGGTGGTTTCTGCTCCAGATGGACCAATGCCTCAAACAAAGGAACATATACTGCTTGCTCGTCAGGTTGGTGTGCCCTCATTGGTCTGCTTTCTAAATAAGGTTGATGCTGTTGATGATCCAGAGTTGCTTGAACTTGTGGAGATGGAGCTTCGTGAACTGCTTAATTTCTACAAATTTCCTGGGGATGAAATCCCAATTGTACGAGGTTCAGCCTTGTCTGCATTGCAGGGGACTAATGAAGAACTTGGAAAAAAGGCTATCTTAAAACTAATGGATGTTGTGGATGAATACATTTTGGATCCTGTGCGGCAACTTGACAAGCCTTTCTTAATGCCAATAGAAGATGTTTTCTCAATTCAGGGGCGGGGAACTGTGGTGACTGGTCGTGTTGAACAAGGAACCATCAAAGTAGGTGAGGAGGTTGAAGTATTGGGACTAACACAGAGTGGACCCTTGAAGACTACTGTAACTGGTGTGGAAATGTTCAAGAAAATTTTGGATCGAGGGGAAGCTGGTGATAATGTGGGACTTCTTCTACGTGGACTGAAGCGGGATGATGTACAGCGTGGAATGGTCGTGACCAAGCCTGGTGCACTAAAAACGTATAAAAAGTTTGAAGCAGAGATTTATGTCCTCTCAAAAGATGAAGGTGGCCGTCATACTGCTTTTTTCTCTAATTATAAGCCTCAGTTTTACTTGAGGACAGCAGATGTTACCGGAAAGGTGGAATTACCCGAAAGTGTTAAGATGGTTATGCCTGGTGACAACGTGACTGCAACTTTTGAGTTGATATCACCTGTTCCTCTTGAAATA | 1278 | 0.446 | CAMASVAFRNLNAKRSLFSLHFANAYHSLSRETCTTLQNCYAPSLALVSLRRFMATFSRTKPHLNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFEDIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLNFYKFPGDEIPIVRGSALSALQGTNEELGKKAILKLMDVVDEYILDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKVGEEVEVLGLTQSGPLKTTVTGVEMFKKILDRGEAGDNVGLLLRGLKRDDVQRGMVVTKPGALKTYKKFEAEIYVLSKDEGGRHTAFFSNYKPQFYLRTADVTGKVELPESVKMVMPGDNVTATFELISPVPLEI | 426 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste2g02458 | 426 | CDD | EFTU_III | 355 | 425 | - | - | |
Pste2g02458 | 426 | FunFam | Elongation factor Tu | 259 | 389 | - | - | |
Pste2g02458 | 426 | PANTHER | ELONGATION FACTOR TU-RELATED | 53 | 425 | - | - | |
Pste2g02458 | 426 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 60 | 279 | IPR027417 | - | |
Pste2g02458 | 426 | Pfam | Elongation factor Tu domain 2 | 278 | 349 | IPR004161 | GO:0005525 | |
Pste2g02458 | 426 | NCBIfam | elongation factor Tu | 54 | 425 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Pste2g02458 | 426 | SUPERFAMILY | Translation proteins | 258 | 354 | IPR009000 | - | |
Pste2g02458 | 426 | PRINTS | GTP-binding elongation factor signature | 65 | 78 | IPR000795 | GO:0003924|GO:0005525 | |
Pste2g02458 | 426 | PRINTS | GTP-binding elongation factor signature | 182 | 191 | IPR000795 | GO:0003924|GO:0005525 | |
Pste2g02458 | 426 | PRINTS | GTP-binding elongation factor signature | 109 | 117 | IPR000795 | GO:0003924|GO:0005525 | |
Pste2g02458 | 426 | PRINTS | GTP-binding elongation factor signature | 145 | 156 | IPR000795 | GO:0003924|GO:0005525 | |
Pste2g02458 | 426 | PRINTS | GTP-binding elongation factor signature | 129 | 139 | IPR000795 | GO:0003924|GO:0005525 | |
Pste2g02458 | 426 | FunFam | Elongation factor Tu | 53 | 256 | - | - | |
Pste2g02458 | 426 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 102 | 117 | IPR031157 | - | |
Pste2g02458 | 426 | Pfam | Elongation factor Tu GTP binding domain | 61 | 253 | IPR000795 | GO:0003924|GO:0005525 | |
Pste2g02458 | 426 | Gene3D | - | 54 | 256 | IPR027417 | - | |
Pste2g02458 | 426 | CDD | EF_Tu | 62 | 256 | IPR041709 | - | |
Pste2g02458 | 426 | Gene3D | Translation factors | 259 | 389 | - | - | |
Pste2g02458 | 426 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 61 | 257 | IPR000795 | GO:0003924|GO:0005525 | |
Pste2g02458 | 426 | NCBIfam | small GTP-binding protein domain | 65 | 202 | IPR005225 | GO:0005525 | |
Pste2g02458 | 426 | CDD | EFTU_II | 264 | 352 | IPR033720 | - | |
Pste2g02458 | 426 | Pfam | Elongation factor Tu C-terminal domain | 354 | 425 | IPR004160 | - | |
Pste2g02458 | 426 | Gene3D | Translation factors | 393 | 426 | - | - | |
Pste2g02458 | 426 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 358 | 425 | IPR009001 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste2g02458 | Pste-Chr2 | 24714171 | 24717657 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste2g02458 | 59 | 368 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 32.464 | 1.03e-41 | 151 |