Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02458 TGTGCCATGGCTTCAGTTGCATTCAGAAACCTAAATGCTAAGCGCTCCCTCTTCTCTTTGCATTTCGCCAATGCTTACCATTCACTTTCTCGTGAAACTTGCACCACACTCCAAAACTGCTATGCGCCCTCTTTGGCTCTCGTTTCTCTACGGAGATTCATGGCCACTTTCTCTCGAACAAAGCCTCACCTTAACGTGGGCACAATTGGGCATGTTGATCATGGGAAAACCACACTAACTGCTGCAATTACCAAGGTGCTAGCTGAAGAAGGTAAAGCCAAGGCCATTGCTTTTGAGGACATAGACAAGGCTCCTGAGGAGAAGAAGAGAGGAATTACTATTGCTACTGCTCATGTAGAGTATGAGACAGCAAAGAGGCACTACGCCCATGTTGATTGCCCAGGACATGCAGACTATGTTAAGAACATGATAACTGGAGCTGCACAAATGGATGGCGGAATTCTGGTGGTTTCTGCTCCAGATGGACCAATGCCTCAAACAAAGGAACATATACTGCTTGCTCGTCAGGTTGGTGTGCCCTCATTGGTCTGCTTTCTAAATAAGGTTGATGCTGTTGATGATCCAGAGTTGCTTGAACTTGTGGAGATGGAGCTTCGTGAACTGCTTAATTTCTACAAATTTCCTGGGGATGAAATCCCAATTGTACGAGGTTCAGCCTTGTCTGCATTGCAGGGGACTAATGAAGAACTTGGAAAAAAGGCTATCTTAAAACTAATGGATGTTGTGGATGAATACATTTTGGATCCTGTGCGGCAACTTGACAAGCCTTTCTTAATGCCAATAGAAGATGTTTTCTCAATTCAGGGGCGGGGAACTGTGGTGACTGGTCGTGTTGAACAAGGAACCATCAAAGTAGGTGAGGAGGTTGAAGTATTGGGACTAACACAGAGTGGACCCTTGAAGACTACTGTAACTGGTGTGGAAATGTTCAAGAAAATTTTGGATCGAGGGGAAGCTGGTGATAATGTGGGACTTCTTCTACGTGGACTGAAGCGGGATGATGTACAGCGTGGAATGGTCGTGACCAAGCCTGGTGCACTAAAAACGTATAAAAAGTTTGAAGCAGAGATTTATGTCCTCTCAAAAGATGAAGGTGGCCGTCATACTGCTTTTTTCTCTAATTATAAGCCTCAGTTTTACTTGAGGACAGCAGATGTTACCGGAAAGGTGGAATTACCCGAAAGTGTTAAGATGGTTATGCCTGGTGACAACGTGACTGCAACTTTTGAGTTGATATCACCTGTTCCTCTTGAAATA 1278 0.446 CAMASVAFRNLNAKRSLFSLHFANAYHSLSRETCTTLQNCYAPSLALVSLRRFMATFSRTKPHLNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFEDIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLNFYKFPGDEIPIVRGSALSALQGTNEELGKKAILKLMDVVDEYILDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKVGEEVEVLGLTQSGPLKTTVTGVEMFKKILDRGEAGDNVGLLLRGLKRDDVQRGMVVTKPGALKTYKKFEAEIYVLSKDEGGRHTAFFSNYKPQFYLRTADVTGKVELPESVKMVMPGDNVTATFELISPVPLEI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02458 426 CDD EFTU_III 355 425 - -
Pste2g02458 426 FunFam Elongation factor Tu 259 389 - -
Pste2g02458 426 PANTHER ELONGATION FACTOR TU-RELATED 53 425 - -
Pste2g02458 426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 279 IPR027417 -
Pste2g02458 426 Pfam Elongation factor Tu domain 2 278 349 IPR004161 GO:0005525
Pste2g02458 426 NCBIfam elongation factor Tu 54 425 IPR004541 GO:0003746|GO:0005525|GO:0006414
Pste2g02458 426 SUPERFAMILY Translation proteins 258 354 IPR009000 -
Pste2g02458 426 PRINTS GTP-binding elongation factor signature 65 78 IPR000795 GO:0003924|GO:0005525
Pste2g02458 426 PRINTS GTP-binding elongation factor signature 182 191 IPR000795 GO:0003924|GO:0005525
Pste2g02458 426 PRINTS GTP-binding elongation factor signature 109 117 IPR000795 GO:0003924|GO:0005525
Pste2g02458 426 PRINTS GTP-binding elongation factor signature 145 156 IPR000795 GO:0003924|GO:0005525
Pste2g02458 426 PRINTS GTP-binding elongation factor signature 129 139 IPR000795 GO:0003924|GO:0005525
Pste2g02458 426 FunFam Elongation factor Tu 53 256 - -
Pste2g02458 426 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 102 117 IPR031157 -
Pste2g02458 426 Pfam Elongation factor Tu GTP binding domain 61 253 IPR000795 GO:0003924|GO:0005525
Pste2g02458 426 Gene3D - 54 256 IPR027417 -
Pste2g02458 426 CDD EF_Tu 62 256 IPR041709 -
Pste2g02458 426 Gene3D Translation factors 259 389 - -
Pste2g02458 426 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 61 257 IPR000795 GO:0003924|GO:0005525
Pste2g02458 426 NCBIfam small GTP-binding protein domain 65 202 IPR005225 GO:0005525
Pste2g02458 426 CDD EFTU_II 264 352 IPR033720 -
Pste2g02458 426 Pfam Elongation factor Tu C-terminal domain 354 425 IPR004160 -
Pste2g02458 426 Gene3D Translation factors 393 426 - -
Pste2g02458 426 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 358 425 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02458 Pste-Chr2 24714171 24717657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02458 59 368 Eukaryotic Initiation Factors Gene Family AT5G60390 32.464 1.03e-41 151