Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02432 AAAAAATACATTTATTATAAAATAATAAAACCATAAGAGCAAGTTAAAGATGATCGAATTTCTCAGAATGGTGTCCACTATTTAAAGCCCAATTTCAAGGCAAAACCCTCTTTCTCATCCTCTTACTTCTGGTTAGGGTTCCTCCTTCGAATCAAAGCATGGCTGCTACAACAACTGCTAGATCTTTTCTCCAAGTCGCCGCAACGGAGGAGGTTGCACCTCCTCTTAGAGTCGTTATCTTGAAGATAATTAAGCATTGTAAGGACCACTCCCCTTCTTTAGTCACTGGACAACTTCTTGGGTTGGATGTTGGAAGTGTTCTTGAAGTTACCAATTGCTTCCCCTTTCCAATGAGGGAGGAGGATGAGGAAATTGAAGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGGTGCTTGAGGGAGGTTAACGTTGACAACAACACTGTTGGATGGTACCAGTCTACATTGCTTGGCTCCTTTCAGACTGTGGAGCTTATTGAAACCTTTATGAATTATCAGGAGAATATTAGGCGCTGTGTTTGCATAATATATGACCCATCGAGGTCTGATCAAGGTGTTCTAGCTCTTAAGGCCTTGAAACTTTCTGACTCATTCATGGAACTCTATCGCAGCAATAATTTTATTGGAGAGAAATTGAGGGAGAAGAACTTAACATGGGTGGATATCTTCGAGGAAATACCGATAAAAGTTTCAAATTCTGCCCTTATAAGTGCTTTTATGACAGAGCTAGAACCTGATACTCCAGTCTCCCAGTGTGATTATGATCGTTTGCAATTGTCAACCAGTTCGTTAATGGAGAGGAATATGGAATTTTTGATTGAATGCATGGATGACTTGTCCCTAGAACAACAAAAGTTCCAATTCTACTATCGGAGCTTGTCTCGTCAACAAGCTCAGCAGCAAGCTTGGCTACAAAAGAGAAGGGCAGAGAACATGTCTCGTAAAGCTGCTGGAGAAGAACCCTTGCCAGAGGAAGATCCTTCAAATCCCATTTTCAAGCCACTGCCCGAGCCCTCACGGTTGGAGAGCTTCCTCATAACAAATCAAATTTCCAACTACTGCTACCAAATCAATGGGGTGTCAGGGCAGGGCTTGAACAGACTCTATTTGATGAAGGCTTTGCGTGAGAATTGAGAAGGCAATTTTTGTTTGCTATTCTGATGGTTTGATCCAATTTTTTGTTTGCTATTCTGATGGTGAATTTGGTAGTAGGTTAGAGGATCGTGCTTTTAAGGTGGCATAATTTTTGTTCAGTTTGTGAACACATCCAATTGTATGCGGTATAATCTGTTATTTAGAGATTCATACAGTGCCACTTGCTGCTTTTTATTTGAGTTACAAAATTTGGCATCCAGTTATATTATTATTCACCAACTACTTTAGTTCGTTTTTGTGGAAGATATTTATACCTTTCATGAAGACATTTGTAAGATTTTGAATTTGATGGTTTAAAAATAGTTTGGAAAACCAATCTCGTATATTGTAATAAAAAAGTCTCTTTAAATTTCCCCAGAATTGGATAAGAACCTCCAAAATGTGGTGGAGCTGAGGAATGACTGTAAG 1586 0.3934 MAATTTARSFLQVAATEEVAPPLRVVILKIIKHCKDHSPSLVTGQLLGLDVGSVLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLTWVDIFEEIPIKVSNSALISAFMTELEPDTPVSQCDYDRLQLSTSSLMERNMEFLIECMDDLSLEQQKFQFYYRSLSRQQAQQQAWLQKRRAENMSRKAAGEEPLPEEDPSNPIFKPLPEPSRLESFLITNQISNYCYQINGVSGQGLNRLYLMKALREN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02432 332 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 21 332 IPR027524 GO:0003743|GO:0005737|GO:0005852
Pste2g02432 332 FunFam Eukaryotic translation initiation factor 3 subunit H 5 208 - -
Pste2g02432 332 SMART pad1_6 19 152 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pste2g02432 332 MobiDBLite consensus disorder prediction 264 289 - -
Pste2g02432 332 CDD MPN_eIF3h 26 281 IPR027524 GO:0003743|GO:0005737|GO:0005852
Pste2g02432 332 Pfam C-terminal region of eIF3h 139 331 IPR045810 -
Pste2g02432 332 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 26 121 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pste2g02432 332 ProSiteProfiles MPN domain profile. 17 153 IPR037518 -
Pste2g02432 332 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 26 315 - -
Pste2g02432 332 Gene3D Cytidine Deaminase, domain 2 23 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02432 Pste-Chr2 24492181 24497097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02432 83 332 Eukaryotic Initiation Factors Gene Family AT1G10840 83.600 1.87e-155 434