Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste2g02424 | AGGGATAAAGTAAAACGTCTTTCGTTCCGAGACACTCATCTATGTGTGTCTTCCTTCCTCTGCGCTTCACCAACAAGTTCCAAAATTAAAATTGTAGTATATAGTAATAGTAATAGTAATAGTAATAGTAAGAAACAGAAGCAGAAGAGGAAGATGTTGGTGACTGAATCGGGTGGTTCAAAGGTGGACATTCCGGAGGAGCTGCTTAAAGTTCTACCGTCTGATCCTTACGAGCAGCTGGATGTGGCACGCAAGATCACCTCCGTTGCGCTGTCCACACGTGTGAACGAGCTCCAATCAGAGTCCTCCACTCTACGCGCCGAAGTCGCCGAAAGGGACCGGCTCATCGCCGACCTCCAGGCTCAGCTGGCCTCCATCGATGGCTCCCTCGCCGAAGCCGCCGAGAAGCTCGCCCGAGCCGACCATGACAAGGAGAGTTTAATGAAGGAGAATACTTCGCTTTCCAACACGGTGAGAAAGCTGAGCAGAGATGTGGCCAAGGGAGAAGCGCCGGACATTGTCGCCAAGTTGCAAAGTCAAGCAAGTTTCACTTCCACATCGCAATTTGGAGATGAGGATTCTTCAACGCTTTCAAGATCTTCTTCAATGCGAATAAACACGGAAAATGCTTTGGCAGAGGATCTTGCAGGGTCAAAATGTGGAGCACCACATAATCTCCTCTTAGCATCTCAAAGTAGCACCCCTCGAATTACTCCCCCAGGTTCCCCTCCTAGTATGTCAGCGTTGGTATCCCCATCAAGAACATCGTCTAAGCCTGTGTCTCCAAGGCGCCATGCAATGTCCTTTTCAACCTCAAGAGGAATGTTTGATGATAGGTCTTCAGTAGGATCACAAACTGGACGAACACGGGTGGATGGAAAAGAGTTTTTTCGCCAAGTTAGGAGTCGTTTATCTTATGAGCAGTTTGGTGCATTTTTAGCAAATGTTAAGGAACTGAATTCTCACAAACAAACCAAAGAGGTAACCCTCGGCTTCCTTCCCTCTTCCCATGCTACCCCATATGTATCTGAATTTCAGTTAATTGCCACATTTATGTGTGTGTCTGTGAATGTGAAATTGCAGGAAACACTACAGAAAGCTAATGAGATATTTGGGCCTGGAAACAAGGACCTCTATGCTATATTTGAGGGATTGATAATGCGCAATAAAAATGATGCGAACCGCTACTTTGATGCATCTTTCTCTTTCTGTTCCTCTATGACTCTATATGCATGCACGTCATTCCCGTGGCTACCCTTTTGGTTCTCGGAAACTCCCTTGGCCACCATGAACGATGAACGAGAACCACAAGCCTCCCCGAGCAATAGCGTCCACAAGATAGTAAAAAAACAAATGACTGAAAGGGAGAAATCCATTTTTAAAGGCAGACGTCCACGAACTGGGTTTTCTGATTCATTTTCAAGTATTGACATCGAAACTTTAGACATTGAAGAGGGAGGGCTACGTGAGCACTCTCCTAGGAGTCAAGGGTCTGAAACCCCTAGTTCCAGAGCCAGCACTTCTGATTCAGAGAGTCAGGGATCTTTAGTAGGCACACCTAACAATAACCAATGGCGTGGGTTCTTTAAATTACTTAAGAAAGGATCCCAAATGCCTTTCCAAACTTTTCATCCACTTAAAAATGTTCCAAAACTGACAAGAAGAAAAAGCAAGAGAATAAGGGAGGACCTCATTCCATCTCTGAATTCTCCAGCTCTTCAGTCATCTTTTGACACTGAGTTTGGCTGCTTCAAAACTTCCTGGAAAAACTTCACGCTTGCTGAGATCGAGGCTGCAACCGATGAGTTTAGCGATGAAAATTTGATTGGGGAGGGAGGCTATGCCGAGGTTTATTTAGGCAAATTGGAAGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGAACCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATAATAGTGCACGTCGACCACCCCAACATAGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCCTGTCATCCATACTTTATGGACCTAGAGAGAAACTTGATTGGAGCCTCAGATATAAGATTGCTTTGGGAACTGCTGAGGGCCTTCGCTATCTGCATGAGGCGTGTCAAAGAAGAATAATTCACAAAGATATCAAGGCTTCTAATATTCTGCTCTCAGAGGATTTTGAGCCCCAGATATCTGATTTTGGGCTTGCAAAATGGTTACCTGACCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTCGGCTACCTTCCTCCAGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGCGTGCTATTATTGGAGCTCATTACTGGTAGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGTGTTAGATATACTAAGAGGGGACGAAGATAGCTTAAGAATCGTGAAAGAACGAGCGAAATCAAAACTTCAGAGGACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACAAAGCTTTTGAGTGAGAGGGATCGACATATGGAGACTATTCTAGGCTGCGATAGCTCTGTTACAGATGAAGAAGGAGATAATATCTAGCGTATGGGGTGTCTGTGAATCAGATATGTGTGTACATGGAACTACAGAAGTTGAAAATTGAACTTAAAGAGCACATTTTGATAGACGATCTAGAGCTGTACAGAGCATGGATTGAAGGGGTTAACAAAGACACCGAAGAGGCATAACCTCGTGTGGATGTAGCATGTTTGTCAATAGTTTTATTAGTCAAAGTGATCATGAAATTCTGCTATACTTTCTGAAGCCAAATTAAAGCCCTGATGGTTGCCTTAGATGAGGATTACCCATTTCCACGAAGCGTCAATGATCATCATCTCCAAATACCATTTTCAGCAAGTTGTTTAATTTCTGTTGTAACCAGAAAATTTCCATAATTTCTTCGATTTGTGTTAAGTGATTTTTATTAATATATCTCATCCGTAGTGTTACTGCTGGGACA | 3064 | 0.4351 | RDKVKRLSFRDTHLCVSSFLCASPTSSKIKIVVYSNSNSNSNSKKQKQKRKMLVTESGGSKVDIPEELLKVLPSDPYEQLDVARKITSVALSTRVNELQSESSTLRAEVAERDRLIADLQAQLASIDGSLAEAAEKLARADHDKESLMKENTSLSNTVRKLSRDVAKGEAPDIVAKLQSQASFTSTSQFGDEDSSTLSRSSSMRINTENALAEDLAGSKCGAPHNLLLASQSSTPRITPPGSPPSMSALVSPSRTSSKPVSPRRHAMSFSTSRGMFDDRSSVGSQTGRTRVDGKEFFRQVRSRLSYEQFGAFLANVKELNSHKQTKEVTLGFLPSSHATPYVSEFQLIATFMCVSVNVKLQETLQKANEIFGPGNKDLYAIFEGLIMRNKNDANRYFDASFSFCSSMTLYACTSFPWLPFWFSETPLATMNDEREPQASPSNSVHKIVKKQMTEREKSIFKGRRPRTGFSDSFSSIDIETLDIEEGGLREHSPRSQGSETPSSRASTSDSESQGSLVGTPNNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDTEFGCFKTSWKNFTLAEIEAATDEFSDENLIGEGGYAEVYLGKLEDGNFVAIKRLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLDWSLRYKIALGTAEGLRYLHEACQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWVLDILRGDEDSLRIVKERAKSKLQRTYSEELLDAEEYNSTKLLSERDRHMETILGCDSSVTDEEGDNI | 881 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste2g02424 | 881 | ProSiteProfiles | Protein kinase domain profile. | 603 | 881 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pste2g02424 | 881 | SUPERFAMILY | Protein kinase-like (PK-like) | 588 | 810 | IPR011009 | - | |
Pste2g02424 | 881 | MobiDBLite | consensus disorder prediction | 181 | 202 | - | - | |
Pste2g02424 | 881 | SMART | serkin_6 | 603 | 856 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pste2g02424 | 881 | MobiDBLite | consensus disorder prediction | 247 | 287 | - | - | |
Pste2g02424 | 881 | Gene3D | Transferase(Phosphotransferase) domain 1 | 680 | 864 | - | - | |
Pste2g02424 | 881 | MobiDBLite | consensus disorder prediction | 484 | 521 | - | - | |
Pste2g02424 | 881 | MobiDBLite | consensus disorder prediction | 493 | 521 | - | - | |
Pste2g02424 | 881 | MobiDBLite | consensus disorder prediction | 231 | 287 | - | - | |
Pste2g02424 | 881 | FunFam | Receptor-like cytosolic serine/threonine-protein kinase RBK2 | 573 | 677 | - | - | |
Pste2g02424 | 881 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 722 | 734 | IPR008271 | GO:0004672|GO:0006468 | |
Pste2g02424 | 881 | FunFam | receptor-like cytosolic serine/threonine-protein kinase RBK2 | 680 | 858 | - | - | |
Pste2g02424 | 881 | PANTHER | OS08G0249100 PROTEIN | 439 | 841 | IPR046958 | - | |
Pste2g02424 | 881 | MobiDBLite | consensus disorder prediction | 37 | 57 | - | - | |
Pste2g02424 | 881 | Pfam | Protein kinase domain | 604 | 844 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pste2g02424 | 881 | Coils | Coil | 116 | 164 | - | - | |
Pste2g02424 | 881 | Gene3D | Phosphorylase Kinase; domain 1 | 568 | 677 | - | - | |
Pste2g02424 | 881 | ProSitePatterns | Protein kinases ATP-binding region signature. | 609 | 631 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste2g02424 | Pste-Chr2 | 24390263 | 24404004 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste2g02424 | 574 | 838 | Receptor kinase-like Gene Family | AT1G53420 | 40.293 | 3.43e-57 | 211 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Pste2g02424 | Pkinase | 4.1e-39 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste2g02424 | 2 | 24390263 | 24404004 | Pste2g02424 | 2 | 24390263 | 24404004 | ECH | |
Pste6g04222 | 6 | 31481826 | 31485236 | Pste2g02424 | 2 | 24390263 | 24404004 | PCT |