Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02424 AGGGATAAAGTAAAACGTCTTTCGTTCCGAGACACTCATCTATGTGTGTCTTCCTTCCTCTGCGCTTCACCAACAAGTTCCAAAATTAAAATTGTAGTATATAGTAATAGTAATAGTAATAGTAATAGTAAGAAACAGAAGCAGAAGAGGAAGATGTTGGTGACTGAATCGGGTGGTTCAAAGGTGGACATTCCGGAGGAGCTGCTTAAAGTTCTACCGTCTGATCCTTACGAGCAGCTGGATGTGGCACGCAAGATCACCTCCGTTGCGCTGTCCACACGTGTGAACGAGCTCCAATCAGAGTCCTCCACTCTACGCGCCGAAGTCGCCGAAAGGGACCGGCTCATCGCCGACCTCCAGGCTCAGCTGGCCTCCATCGATGGCTCCCTCGCCGAAGCCGCCGAGAAGCTCGCCCGAGCCGACCATGACAAGGAGAGTTTAATGAAGGAGAATACTTCGCTTTCCAACACGGTGAGAAAGCTGAGCAGAGATGTGGCCAAGGGAGAAGCGCCGGACATTGTCGCCAAGTTGCAAAGTCAAGCAAGTTTCACTTCCACATCGCAATTTGGAGATGAGGATTCTTCAACGCTTTCAAGATCTTCTTCAATGCGAATAAACACGGAAAATGCTTTGGCAGAGGATCTTGCAGGGTCAAAATGTGGAGCACCACATAATCTCCTCTTAGCATCTCAAAGTAGCACCCCTCGAATTACTCCCCCAGGTTCCCCTCCTAGTATGTCAGCGTTGGTATCCCCATCAAGAACATCGTCTAAGCCTGTGTCTCCAAGGCGCCATGCAATGTCCTTTTCAACCTCAAGAGGAATGTTTGATGATAGGTCTTCAGTAGGATCACAAACTGGACGAACACGGGTGGATGGAAAAGAGTTTTTTCGCCAAGTTAGGAGTCGTTTATCTTATGAGCAGTTTGGTGCATTTTTAGCAAATGTTAAGGAACTGAATTCTCACAAACAAACCAAAGAGGTAACCCTCGGCTTCCTTCCCTCTTCCCATGCTACCCCATATGTATCTGAATTTCAGTTAATTGCCACATTTATGTGTGTGTCTGTGAATGTGAAATTGCAGGAAACACTACAGAAAGCTAATGAGATATTTGGGCCTGGAAACAAGGACCTCTATGCTATATTTGAGGGATTGATAATGCGCAATAAAAATGATGCGAACCGCTACTTTGATGCATCTTTCTCTTTCTGTTCCTCTATGACTCTATATGCATGCACGTCATTCCCGTGGCTACCCTTTTGGTTCTCGGAAACTCCCTTGGCCACCATGAACGATGAACGAGAACCACAAGCCTCCCCGAGCAATAGCGTCCACAAGATAGTAAAAAAACAAATGACTGAAAGGGAGAAATCCATTTTTAAAGGCAGACGTCCACGAACTGGGTTTTCTGATTCATTTTCAAGTATTGACATCGAAACTTTAGACATTGAAGAGGGAGGGCTACGTGAGCACTCTCCTAGGAGTCAAGGGTCTGAAACCCCTAGTTCCAGAGCCAGCACTTCTGATTCAGAGAGTCAGGGATCTTTAGTAGGCACACCTAACAATAACCAATGGCGTGGGTTCTTTAAATTACTTAAGAAAGGATCCCAAATGCCTTTCCAAACTTTTCATCCACTTAAAAATGTTCCAAAACTGACAAGAAGAAAAAGCAAGAGAATAAGGGAGGACCTCATTCCATCTCTGAATTCTCCAGCTCTTCAGTCATCTTTTGACACTGAGTTTGGCTGCTTCAAAACTTCCTGGAAAAACTTCACGCTTGCTGAGATCGAGGCTGCAACCGATGAGTTTAGCGATGAAAATTTGATTGGGGAGGGAGGCTATGCCGAGGTTTATTTAGGCAAATTGGAAGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGAACCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATAATAGTGCACGTCGACCACCCCAACATAGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCCTGTCATCCATACTTTATGGACCTAGAGAGAAACTTGATTGGAGCCTCAGATATAAGATTGCTTTGGGAACTGCTGAGGGCCTTCGCTATCTGCATGAGGCGTGTCAAAGAAGAATAATTCACAAAGATATCAAGGCTTCTAATATTCTGCTCTCAGAGGATTTTGAGCCCCAGATATCTGATTTTGGGCTTGCAAAATGGTTACCTGACCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTCGGCTACCTTCCTCCAGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGCGTGCTATTATTGGAGCTCATTACTGGTAGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGTGTTAGATATACTAAGAGGGGACGAAGATAGCTTAAGAATCGTGAAAGAACGAGCGAAATCAAAACTTCAGAGGACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACAAAGCTTTTGAGTGAGAGGGATCGACATATGGAGACTATTCTAGGCTGCGATAGCTCTGTTACAGATGAAGAAGGAGATAATATCTAGCGTATGGGGTGTCTGTGAATCAGATATGTGTGTACATGGAACTACAGAAGTTGAAAATTGAACTTAAAGAGCACATTTTGATAGACGATCTAGAGCTGTACAGAGCATGGATTGAAGGGGTTAACAAAGACACCGAAGAGGCATAACCTCGTGTGGATGTAGCATGTTTGTCAATAGTTTTATTAGTCAAAGTGATCATGAAATTCTGCTATACTTTCTGAAGCCAAATTAAAGCCCTGATGGTTGCCTTAGATGAGGATTACCCATTTCCACGAAGCGTCAATGATCATCATCTCCAAATACCATTTTCAGCAAGTTGTTTAATTTCTGTTGTAACCAGAAAATTTCCATAATTTCTTCGATTTGTGTTAAGTGATTTTTATTAATATATCTCATCCGTAGTGTTACTGCTGGGACA 3064 0.4351 RDKVKRLSFRDTHLCVSSFLCASPTSSKIKIVVYSNSNSNSNSKKQKQKRKMLVTESGGSKVDIPEELLKVLPSDPYEQLDVARKITSVALSTRVNELQSESSTLRAEVAERDRLIADLQAQLASIDGSLAEAAEKLARADHDKESLMKENTSLSNTVRKLSRDVAKGEAPDIVAKLQSQASFTSTSQFGDEDSSTLSRSSSMRINTENALAEDLAGSKCGAPHNLLLASQSSTPRITPPGSPPSMSALVSPSRTSSKPVSPRRHAMSFSTSRGMFDDRSSVGSQTGRTRVDGKEFFRQVRSRLSYEQFGAFLANVKELNSHKQTKEVTLGFLPSSHATPYVSEFQLIATFMCVSVNVKLQETLQKANEIFGPGNKDLYAIFEGLIMRNKNDANRYFDASFSFCSSMTLYACTSFPWLPFWFSETPLATMNDEREPQASPSNSVHKIVKKQMTEREKSIFKGRRPRTGFSDSFSSIDIETLDIEEGGLREHSPRSQGSETPSSRASTSDSESQGSLVGTPNNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDTEFGCFKTSWKNFTLAEIEAATDEFSDENLIGEGGYAEVYLGKLEDGNFVAIKRLTRGNQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLDWSLRYKIALGTAEGLRYLHEACQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWVLDILRGDEDSLRIVKERAKSKLQRTYSEELLDAEEYNSTKLLSERDRHMETILGCDSSVTDEEGDNI 881
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02424 881 ProSiteProfiles Protein kinase domain profile. 603 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02424 881 SUPERFAMILY Protein kinase-like (PK-like) 588 810 IPR011009 -
Pste2g02424 881 MobiDBLite consensus disorder prediction 181 202 - -
Pste2g02424 881 SMART serkin_6 603 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02424 881 MobiDBLite consensus disorder prediction 247 287 - -
Pste2g02424 881 Gene3D Transferase(Phosphotransferase) domain 1 680 864 - -
Pste2g02424 881 MobiDBLite consensus disorder prediction 484 521 - -
Pste2g02424 881 MobiDBLite consensus disorder prediction 493 521 - -
Pste2g02424 881 MobiDBLite consensus disorder prediction 231 287 - -
Pste2g02424 881 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 573 677 - -
Pste2g02424 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Pste2g02424 881 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 680 858 - -
Pste2g02424 881 PANTHER OS08G0249100 PROTEIN 439 841 IPR046958 -
Pste2g02424 881 MobiDBLite consensus disorder prediction 37 57 - -
Pste2g02424 881 Pfam Protein kinase domain 604 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02424 881 Coils Coil 116 164 - -
Pste2g02424 881 Gene3D Phosphorylase Kinase; domain 1 568 677 - -
Pste2g02424 881 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste2g02424 Pste-Chr2 24390263 24404004 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02424 574 838 Receptor kinase-like Gene Family AT1G53420 40.293 3.43e-57 211
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste2g02424 Pkinase 4.1e-39 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02424 2 24390263 24404004 Pste2g02424 2 24390263 24404004 ECH
Pste6g04222 6 31481826 31485236 Pste2g02424 2 24390263 24404004 PCT