Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02404 TCTTGTTTGTGTATTTACTTGTGAAGAGGTAAAATGCAAGCAGCTTCTGAGATTGGGCATGAGGCTGTCCCGAAGCGAGACGCAGATAGTGGGAGGCGCCCTCATATTTCCCTTCAAGTTCCTCCCAGGCCCGTGGGCTTTAGGGCTCTGGACCATTCTCTAAGCTTCAGCAAAGGGATTTCATCATCTAGACACTTGTTGCGGGCCTTGAGCTTCAAAAGAAAAGCCAATGTAGCCGTTGGCGAAACAAGTTCCCTTCTTAATTCAGATCCCAATTCAGCTTCTGATATGGCTTCCACTTCTGAAATTCCATGGACCAGATGTACTTCTCTTCCTGTTACGCCTGCATCTAATCTCTCTCCTTCCGTTTCTACACCCATTTCCGCAAGGACATATAATGAACAGGCTAAGCCTCATAAAGATGTCAATCGTTCTAAAGTTTCAAGGTCTCTTTCTGTACCTGGGCGAAATGTGGTTATTGTAAGATCTGTCTCTTTTTCTACCCGTAGTGATCAGGAGCAACAAGATTCAAATGATGATCAAATAACTCCTGTGCCTGTAGAAGTTACTGCCGATGAAGAAATTCCTGAAGAGGAAGCAATGTGTAGGATATGTTTGGATGTGTGTGATGAAAGAAATACCTTTAAAATGGAGTGCAGTTGCAAAGGTGACCTGAGATTGGTGCATGAAGAATGTTTAATTAAATGGTTTAACACAAAAGGAGATAAGAAATGTGATGTATGTAGGCAAGAGGTTCAGAATTTACCTGTAACGTTGCTTCGTGTCCCCAGCTCTGCTCAACGACAAAACAGACAGCTACAAGGTCAGCCAAACCTACATCCAGAGTCAATAAGTGCATGGCAAGATTTTGTGGTGCTTGTCCTGATTAGCACAATATGCTACTTTTTCTTCCTTGAACAGCTACTGCTTCCTGAAATGAAGACTCAAGCGATTATTATTGCAGCACCATTTGCCTTTACCCTGGGCCTCCTAGCTTCTATTTTTGCAGTCATCCTTGCAATTAAAGAGTATATATGGACGTATGCTGCTCTTGAGTTTGCGCTTGTGGCTTTAACCGTGCATCTATTTTATACTATGCTACATTTGACAGTCATATATGCCATATTACTTTCATCAGTTTTGGGTTTTGGAATTGCTATGGCTATCAACTACGCATATATCCAGTTTGCCACTTGGAGACTTCAGGTTTCTCATGATGATAACCCAGTATGAATCTCATCACAAGGGAAACAACTTCATGGATTTTTTTCCTCTGTATCTACCGACATGATGACCTGCGATAGTGTTTATTATGAACCTTGTGTTTGTCAATCAATACCATGTAGTATATTTTTTCTAAATAAATATCATGAAGTGTATACTCAAGAGAGCAAGAGA 1398 0.412 MQAASEIGHEAVPKRDADSGRRPHISLQVPPRPVGFRALDHSLSFSKGISSSRHLLRALSFKRKANVAVGETSSLLNSDPNSASDMASTSEIPWTRCTSLPVTPASNLSPSVSTPISARTYNEQAKPHKDVNRSKVSRSLSVPGRNVVIVRSVSFSTRSDQEQQDSNDDQITPVPVEVTADEEIPEEEAMCRICLDVCDERNTFKMECSCKGDLRLVHEECLIKWFNTKGDKKCDVCRQEVQNLPVTLLRVPSSAQRQNRQLQGQPNLHPESISAWQDFVVLVLISTICYFFFLEQLLLPEMKTQAIIIAAPFAFTLGLLASIFAVILAIKEYIWTYAALEFALVALTVHLFYTMLHLTVIYAILLSSVLGFGIAMAINYAYIQFATWRLQVSHDDNPV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02404 399 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 246 IPR013083 -
Pste2g02404 399 SUPERFAMILY RING/U-box 187 241 - -
Pste2g02404 399 CDD RING_CH-C4HC3_MARCH 191 238 - -
Pste2g02404 399 MobiDBLite consensus disorder prediction 1 32 - -
Pste2g02404 399 Pfam RING-variant domain 191 237 IPR011016 GO:0008270
Pste2g02404 399 ProSiteProfiles Zinc finger RING-type profile. 191 238 IPR001841 -
Pste2g02404 399 SMART ringv_2 190 238 IPR011016 GO:0008270
Pste2g02404 399 ProSiteProfiles Zinc finger RING-CH-type profile. 183 244 IPR011016 GO:0008270
Pste2g02404 399 PANTHER OS02G0165000 PROTEIN 42 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02404 Pste-Chr2 24219246 24223196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02404 177 298 C3H Transcription Factor Family AT2G37950 29.545 7.52e-10 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02404 2 24219246 24223196 Pste2g02404 2 24219246 24223196 ECH