Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02382 GTAAAACGTTTTAATATTCTGCTTGTGAGCTTTGCTTCCACGTTTTGTTTTGTTTTGTCGGTTGAACCAAGCAATTCGACCCGGAATTTCTGGAACGGCTCTGCAACCAACCCTGGCATTATGACAATGCTGAGCATAGGGGAGGAGGAGGGTAAGAGCAATGTCACTGCGTTGGTTTCTTCAACCACCATGGAAAGTGTGTCTCACAAGAGCTTAGAATTTAAAGAACGGAATTACATGGGATTATCTGATTGTTCTTCTGTGGACAGCTCAGTTCCATCATTCTCAGAAGACAGTAAAAGTAATCTGAACCTGAAAGCCACTGAACTGAGACTCGGGCTTCCTGGGTCACAATCTCCTGAAAGAAGATCAACTCAATTTGATGAAAAACCTTTGTTTCCTTTGCATCCTTTGACTGATGATCAGCATTCTTCAACCAAGACTGCTGTTTTGGGAAACAAAAGAGGATTCTCTGATGCCATGAATGGCTTCTCAGAGGGGAAATTCCTAGTCGATTCAGAGGCTGCTAATCCAATACTATCTCCCAGGCCTGCTTCTAACTTGGGATTAAAACCAGGTTCTACACTTGAGAAGGTTGGGGCTCAGCAAACCAAAATGAAAGAAGTTGCTGCAACAAATGTGGGGGTCGATAAGCCTCATGCTGCTAATGAAACTAGACCAAATAACAGTGCACCAGCTACCAAGGCTCAGGTTGTGGGGTGGCCTCCATTAAGATCATTCAGGAAAAATTCATTGGCAACTAATTCAAAGAACAATGATGAAGTTGAAGGAAAAGTGGGGGTTGGTGCACTGTTTGTGAAGGTCAGTATGGATGGCGCTCCCTATTTAAGGAAAGTAGACTTGAAGAATTACTCTACATATCCAGAATTATCTTCTGCTCTAGAAATGATGTTCAGCTGTTTTACTATAAGTCAATGTGGATCTCATGGAATTCTGGGCAGGGAAATGCTGAATGAAACCAAGCTGAAGGACCTTCTTCATGGATCGGAATATGTTCTTACATATGAGGACAAGGATGGCGATTGGATGCTTGTGGGTGATGTTCCCTGGGAAATGTTCACTGAAACATGCAAGAGGCTGAGGATCATGAAGAGTTCGGATGCCATTGGTCTAGCTCCCAGGGCTGTCGAAAAAAGTAAGAGTAGGACCTAGGCAGTACCAGGGTTCCTCTCTATCCATCTAACTGTCTGAGGGATTAAAAGCTTCTGGGCAAAATTAGGGGAGAAACAAATCAAAGACATGGTGTCTTGGAAGCGATAACTGAAGGCATTTTGGAGTGGATAGAAATCTCATATTAAGCTGCCCTAATCCTTCTATTGTTGTTGATTATGTTGTCATGGCGTTTATGTTTAGTAAGCTACTTTTCAAGATTGTTGTTGTGTTAAAACTTATAAAAACTCCAAGACTTGACTGTGGTCTGTGGAGTACCTATATTTTATGTATTTGAGTTAATGTAGTTGAAGGATCTGTGATGTGTAAATTTTACAGCGTACCTTCAACGGGGTGTCCTATGTTTGTGTTAAAATAAACCAAGTTGTGTGTCAGTATGGCCATGTACTGTTAGCCACTTGTCGAAGTCGTTACCCAAAAGCATACGGTTGTCAGGATCTAACCAAAAAACTGTGGCGTTAAAGCTAGAATTCCCAAACTAGATAGATGTTTCTG 1686 0.4187 VKRFNILLVSFASTFCFVLSVEPSNSTRNFWNGSATNPGIMTMLSIGEEEGKSNVTALVSSTTMESVSHKSLEFKERNYMGLSDCSSVDSSVPSFSEDSKSNLNLKATELRLGLPGSQSPERRSTQFDEKPLFPLHPLTDDQHSSTKTAVLGNKRGFSDAMNGFSEGKFLVDSEAANPILSPRPASNLGLKPGSTLEKVGAQQTKMKEVAATNVGVDKPHAANETRPNNSAPATKAQVVGWPPLRSFRKNSLATNSKNNDEVEGKVGVGALFVKVSMDGAPYLRKVDLKNYSTYPELSSALEMMFSCFTISQCGSHGILGREMLNETKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTETCKRLRIMKSSDAIGLAPRAVEKSKSRT 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02382 390 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 103 377 IPR003311 GO:0005634|GO:0006355
Pste2g02382 390 Gene3D - 265 384 - -
Pste2g02382 390 SUPERFAMILY CAD & PB1 domains 269 371 - -
Pste2g02382 390 FunFam Auxin-responsive protein 265 382 - -
Pste2g02382 390 ProSiteProfiles PB1 domain profile. 270 372 IPR000270 GO:0005515
Pste2g02382 390 Pfam AUX/IAA family 108 381 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02382 Pste-Chr2 24032726 24038017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02382 138 375 B3 DNA Binding Superfamily AT5G20730 25.806 2.32e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pste2g02382 AUX_IAA 1.3e-89 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02382 2 24032726 24038017 Pste2g02382 2 24032726 24038017 ECH