Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02363 AATAAAAGAAGCCCTCCAGAGAGAGAAAGATAAAAAATGAGAACACCCTTTGAAACTGAAAGAGAGAGTAAGTGAGTGTGTGCGCGAGAGAGAGAAGAGAGAGAGAGTGAGAAGAAGACAGAGACAAACGCTGTCTGTGGGAGGGCGACTTAGAGAGAGAGAGAGAGAAACCCCAGAAAATCGAACCCCATTTTTTCTCTCTACTTTCAATTTGATTGGAGGCTCTCATTGTGCTTCTCCGATTACCGTCGAATCAGCTCCGTTCTCCGGTTCGTGTCGGTGCAATGGAGCAGTACGGCCGCTCCAGTGAAGGTTCGCGGTCTGATCCGTCTCCGGAATGGGCCGGGCCAGAACCCCAAAGCGGGCTCGAAGAGCCTATGTGGCAATTGGGAATTGGTGGTGCCGAGGAAGCGTATCCGCAACGCCCCGATGAGGTTGATTGCACTTACTATTTGAGGACTGGCTTCTGTGGCTTTGGTTCGCGGTGTCGGTTCAACCATCCTCGTGACCGTGTCGCGGTTGTTGGAGCTGAGAGGACCGCATGGGAGTATCCGGAACGAGTAGGCCAGCCTGTCTGCCAGTATTACTTGAAGACAAGAACGTGCAAATTTGGTTCATCTTGCAAGTACCACCACCCTAGGCAGGCAGGGGGCGCAGCTACCCCTGTGTCGTTAAATTATTATGGATATCCATTGCGACCGGGTGAAAAGGAGTGTTCCTATTATGTGAAAACGGGACAGTGCAAGTTTGGTGCAACTTGTAAATTCCATCATCCAGTTCCTGCTGGCGTCCAAATTCAGGCACCAGCACCAGTTGCTCCAGTTTCGCCTTTGCCTGTACCAGTACCTTCACCTCTATATTCAACCATGCAGCCCCCACCAGGTCCATCGTCCCAGCAAATTGGTGTGTTTGTTGCGAGGCCTTCTCTGCTTCCTGGCTCATTAGTCCAGAGCCCCTATGGACCTGTGGTATTGTCCCCTGCCATGGTACCTATTTCTGGCTGGGGTCCTTATCAAGCTTCTGCCACAGGTGCTGTACTTCCTTCTGGTACTCCATCTAATGTTGGGTCAGCGCAGTTTTATGGGATAACCCAGCTACCTTCATCAGCAGCTGCTTATCCTCGACCTTATCAACCATCTGGTTCCTCAGTTGGTCCTTCAAGCAGTAGTCAGAAGGAGCAGACATATCCAGAAAGGTCTAATCAACCAGAATATCAGTATTATCCAAAAACAGGGGAGGTTAAATTTGGTCCATCCTATAGATATCAAGCTCCATCAGACATGAGTGCAACAAGATCAAATGTGAGTCTTAGTCCTGCAGGCCTTCCTTTGCGCCCGGGGGCACCACATTGCACTCATTATGCACAACATGGAGTTTGTAAGTTTGGTTCTGCATGTAAATTCGATCATCCTATTGGTTCACTGAGTTATAGTCCATCTGCTTCTTCCCTGGCTGACATGCCAGTTGCACCCTATCCCGTGGGTTCAACAATTGGTACTCTTGCTCCATCGTCTTCATCATCAGAGTTGCGGCCTGAATTTACCTCAGGGTCCAGCAAGGAGTCTGTTCCATCGAGAATGTCTTCATCAAGGAGCATGTTGACTGGGTCAATTGGTTTGACTGTGTCAACTGGTGGACCAGTTTCTCAATCAAGCATTCAACCATCTGCTCAAAGTTCAGCTCCTCTAGCCGCTGCCACTAGTACAAGTAGCGATGTTTCTCACACCTCGAGTTAAGCAATGTGAATGCATACCTCATAATTACTCCTTTTTTCAATCTCAATTCTTCCACTGAACATAATTATTCAAAGGAGGTCCTCCAATAGGTTTTGTTTTCAGTAATCCCAGTTCACTTTCAGGTCTAGCACACTTCACACCAATTATCTTTGTGTTCATATAATCTTTTTGTGGCCATTCCTTTGATCTTGAATAAACCATGGCCATCCTTGAGAATTTTAGCAATCCATACGACCACCTTGCTTTTGAATAACTCCGAAAGAATCTGCAAGCCCATTGTCCACGTCCTTTAACATCTCCAATTTTTGGAGGTTGTGCTGCTTATTTATGGTCCAATCTTTTTTTATATGAAAACATTCTGTCCAGACTTTCGTTTACCACGTGCTTATGTCTCTTCACCTGAACCCTTTTTTTAATTTGGGAACAATTTTCCATTTCTTCTTTGTTAGCCCTGTCAATACTTTTCCCAACTTGTATCTGGGTTTACTGTGAAGAGAAGTACCAGGAGACTACAATGAGGCTTCACATTGCTATCTTATATGGTTTTAGATACATGATGTTTGTGACAATGAAAAGCTTAACTTGGTACTTAAATTTATTACAAATACGTATATGAAGAAACAAATTTAAATTAACACATTTGAATGTGTAATAACCTTTTCTTTTCTCCTTTTCTATCACTTTATACCCGATCAAGC 2434 0.4532 MEQYGRSSEGSRSDPSPEWAGPEPQSGLEEPMWQLGIGGAEEAYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRVAVVGAERTAWEYPERVGQPVCQYYLKTRTCKFGSSCKYHHPRQAGGAATPVSLNYYGYPLRPGEKECSYYVKTGQCKFGATCKFHHPVPAGVQIQAPAPVAPVSPLPVPVPSPLYSTMQPPPGPSSQQIGVFVARPSLLPGSLVQSPYGPVVLSPAMVPISGWGPYQASATGAVLPSGTPSNVGSAQFYGITQLPSSAAAYPRPYQPSGSSVGPSSSSQKEQTYPERSNQPEYQYYPKTGEVKFGPSYRYQAPSDMSATRSNVSLSPAGLPLRPGAPHCTHYAQHGVCKFGSACKFDHPIGSLSYSPSASSLADMPVAPYPVGSTIGTLAPSSSSSELRPEFTSGSSKESVPSRMSSSRSMLTGSIGLTVSTGGPVSQSSIQPSAQSSAPLAAATSTSSDVSHTSS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02363 483 SUPERFAMILY CCCH zinc finger 354 380 IPR036855 GO:0046872
Pste2g02363 483 ProSiteProfiles Zinc finger C3H1-type profile. 350 378 IPR000571 GO:0046872
Pste2g02363 483 SUPERFAMILY CCCH zinc finger 140 165 IPR036855 GO:0046872
Pste2g02363 483 Gene3D - 45 123 - -
Pste2g02363 483 MobiDBLite consensus disorder prediction 277 313 - -
Pste2g02363 483 ProSiteProfiles Zinc finger C3H1-type profile. 47 75 IPR000571 GO:0046872
Pste2g02363 483 ProSiteProfiles Zinc finger C3H1-type profile. 92 120 IPR000571 GO:0046872
Pste2g02363 483 SUPERFAMILY CCCH zinc finger 49 76 IPR036855 GO:0046872
Pste2g02363 483 SMART c3hfinal6 138 165 IPR000571 GO:0046872
Pste2g02363 483 SMART c3hfinal6 47 74 IPR000571 GO:0046872
Pste2g02363 483 SMART c3hfinal6 350 377 IPR000571 GO:0046872
Pste2g02363 483 SMART c3hfinal6 92 119 IPR000571 GO:0046872
Pste2g02363 483 ProSiteProfiles Zinc finger C3H1-type profile. 138 166 IPR000571 GO:0046872
Pste2g02363 483 MobiDBLite consensus disorder prediction 285 312 - -
Pste2g02363 483 SUPERFAMILY CCCH zinc finger 94 120 IPR036855 GO:0046872
Pste2g02363 483 Gene3D - 124 173 - -
Pste2g02363 483 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 140 164 IPR000571 GO:0046872
Pste2g02363 483 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 95 119 IPR000571 GO:0046872
Pste2g02363 483 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 356 376 IPR000571 GO:0046872
Pste2g02363 483 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 49 74 IPR000571 GO:0046872
Pste2g02363 483 MobiDBLite consensus disorder prediction 1 30 - -
Pste2g02363 483 PANTHER PROTEIN PHOSPHATASE RELATED 31 412 - -
Pste2g02363 483 MobiDBLite consensus disorder prediction 407 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02363 Pste-Chr2 23821725 23830796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02363 1 452 C2H2 Transcription Factor Family AT5G18550 54.839 1.89e-146 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste2g02363 zf-CCCH 1.2e-06 CL0537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02363 2 23821725 23830796 Pste2g02363 2 23821725 23830796 ECH
Pste6g04164 6 30956793 30961834 Pste2g02363 2 23821725 23830796 PCT