Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02360 AAAAAAAAGAAAAAGAAGTAATAAACTTTGAAGTGTATGATCTCCACTCTGCAAAACCCTAACCCAGAAGCCACATTCCTATAAAAGCTGAAACGGTGGTGCAGTTTGCTTTGAAAGCGGAAGCCCTTGATCGAAGTGAAAGCATGTCGAGGAGAAAGGTGAGGGAGCCGAAGGAGGAAAATGTGACTCTGGGTCCAGCTGTTCGAGATGGTGAACACGTTTTTGGTGTGGCTCGCATTTTTGCCTCCTTTAACGACACCTTCATCCATGTGACTGATTTGTCTGGGAGGGAAACCCTTGTTCGCATCACCGGTGGAATGAAGGTTAAAGCTGATAGAGATGAATCGTCTCCATATGCTGCTATGCTTGCAGCACAGGATGTTGCTGCCAGATGCAAGAATTCCAATGTGATCACCCTGAGTGTTAGCCAGTATCATTTGGTCGTGTTCTGTGAAATTACTGTAGTAAGTAGGATGCTGTTTTTCTGTGAAGCTGTCAAGCTTAATGAACTGTTTCAAATTATTTTGGAGCAGGAGCTGGGCATAACCGCTCTTCATATCAAGCTGCGTGCCACTGGTGGAAACAAGACAAAAACACCTGGTCCTGGCGCTCAATCAGCTCTTCGAGCCCTTGCTCGTTCAGGAATGAAAATTGGTCGAATAGAGGATGTAACTCCCATTCCTTCGGATAGCACTCGCAGAAAGAGTGGTAGAAGGGGTAGAAGGCTTTAAACTTTTATTGCATATCACTGGAGTTTGCTAATGCTATGTTTACTTTACTTGCCAGACAGAATTGTGGTGTTTTGATGTTTATCAAGTTAATATCAGAACTTGTATTGCTTTTCTGGAGGTATTAAACAGAATTTTAGTTGAGTACATTTATATGTTAATTGAAAGTCCTGCATGTTGCTTTTTGGCTTGCAAGGATGCTAATCATCCACGCGATAAGTTGACCCTTGGTTTGGTTGATTATTTTTCTTTATAATCCGATGTCTCTCGGCTACTTTAAATTTAAAGTATGG 1021 0.4202 MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKNSNVITLSVSQYHLVVFCEITVVSRMLFFCEAVKLNELFQIILEQELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02360 195 Hamap 30S ribosomal protein S11 [rpsK]. 3 192 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste2g02360 195 ProSitePatterns Ribosomal protein S11 signature. 160 182 IPR018102 -
Pste2g02360 195 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 130 188 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste2g02360 195 SUPERFAMILY Translational machinery components 23 94 - -
Pste2g02360 195 SUPERFAMILY Translational machinery components 130 191 - -
Pste2g02360 195 Gene3D Ribosomal protein S11 1 195 IPR036967 GO:0003735|GO:0005840|GO:0006412
Pste2g02360 195 MobiDBLite consensus disorder prediction 175 195 - -
Pste2g02360 195 Pfam Ribosomal protein S11 28 94 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste2g02360 195 Pfam Ribosomal protein S11 130 191 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02360 Pste-Chr2 23793879 23795957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02360 1 184 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 68.478 8.18e-84 243