Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02346 TGTCTCATAATTAACATGGATACGGGCTTGTCACTGCTTCCCCAACTGATCCACTCAACCATTCCGTCTTATATACATCTCTTACACCCATCTCCTTGTTGCAACCTTTTCACTAACCATATCACATCCTCTCAAAATGAATCATTATCCCTTCATCACCCTCTTCTCTACTATTATACTCATCGTTTCCGTTTCACTCTCAGAGTCACAGCTTATTATTGCAAAGAATCATTTTTCTCTCTAATGAAGGAGTCTCTCCCGGGGAAATACCCCTCGAATTGGGAAGTTGGGAAACCCGTGTGTGACTTCACCGGAGTTACCTGCAACACCAAAGGCCACGTTATAAAGCTGGACCTTTCGTATTGGTCCTCACTTTCTGGAACGTTCCCACCAGATACATGCTCTTATCTCCCACGGTTACGCGTTCTCCGCCTCGGCCACACAAGGTTCAAGTTCCCCATGGATACCATCCTCAACTGTTCCCACTTGGAAGAGCTTAACATGAACCACATGTCCCAAACCGGCACGCTCCCTGATTTCTCTCCCTTAAAACATCTCAAGGTTCTTGACTTGTCCTACAACTTATTCACAGGTCAGTTCCCCATGTCAGTCTTCAACCTCACCAACCTCGAGGTCCTAAACTTCAACGAAAACGGAGGTTTCAACCTGTGGCAGTTACCATCAGATATAGACAGGTTGAAAAACCTGAGGTCCGTGGTGCTGACAACGTGCATGGTGCATGGCCAAATCCCTGCAACCATAGGGAACATAAGTTCCCTCGTGGATCTTGAACTCAGTGGGAATTTCCTAACGGGACAAATCCCCAAAGAGCTTGGTCAGCTGAAGAAGTTGCAGCAACTTGAGCTTTACTATAACTACCACCTGGTTGGGAACATACCAGAGGAGTTGGGTAACCTCACGGAGCTTGTAGATTTGGATATGTCAGTAAACAAGTTCACTGGCAGTATCCCTGCATCGGTCTGTAGGCTTCCCAAGCTTCAAGTCTTGCAGCTCTACAACAACAGCCTCACAGGAGAAATCCCAGGTGCGATTGAAAACTCAACAGCTTTGAGAATGTTGTCTCTCTACGACAACTTCCTTGAAGGACAGGTTCCCACGAAACTGGGACAGTTCTCAAGGATGCTAGTTCTTGACTTGTCCGAAAACAAATTCTCCGGTCCGTTACCAACCCAAGTTTGCAGGGGAGGTACACTACAGTACTTTCTCGTTCTGGATAACATGTTTTCTGGTGAGATACCAGACAGTTACACAAACTGCATGATGCTTTTGAGGTTTAGAGTGAGTAATAATCGTTTGGAGGGGTCCATTCCTGCGGGACTCCTTGGTTTGCCACACGTTTCAATCATTGATTTGAGTAGCAATAATTTAACCGGTCCAATTCCTGAGATCAGCAGAAATTCTAGAAACTTATCTGAACTGTTCCTGCAGAGGAACAAGATTTCAGGTATCATAACTCCCACAATCTCCCGAGCCATTAACTTGGTCAAGATTGATTTCAGTTACAACCTTCTGTCTGGTCCAATCCCTTCCGAAATTGGCAACTTGAGAAAGCTTAATTTGCTTATGTTGCAAGGGAACAAACTGAGTTCCTCCATCCCCGGTTCACTCTCTTCATTGGACTCTCTCAACCTTCTTGATCTCTCCAATAATCTCTTAACCGGAAGCATCCCTGAAAGCCTCTCTGTGCTGCTACCAAACTCTATTAACTTCTCACACAACCTTCTTTCGGGTCCAATTCCTCCAAAACTGATCAAAGGGGGTTTGGTGGAAAGCTTTGCAGGAAATCCTGGTTTGTGTGTGTTACCAGTGTATGCTAATTCATCGGATAAAAACTTCCCGGTATGTGCAAGTACCTACAAGAGTAAGAGGATAAACACCATCTGGATAGCTGGGGTGTCAGTAGTTTTGATCTTTATTGGGTCTGCCTTGTTTCTCAAACGTAGGTGCAGCAAAGACACTGCTGCAGTGGAACATGAGGATACACTGTCCTCTTCGTTCTTCTCTTATGACGTTAAGAGCTTCCACAAAATCAGTTTCGACCAAAGGGAGATCATTGAGTCGTTGGTGGACAAAAACATAATGGGGCATGGAGGGTCTGGGACAGTGTACAGGATTGAGTTGAAAAGTGGTGATATTGTTGCAGTGAAGAGGCTGTGGAGTCACAGATCCAAGGATTCGGCTCCTGAGGATAGATTATTTGTAGACAAGGCATTGAAAGCAGAGGTGGAGACCCTGGGAAGCATAAGACACAAGAACATAGTGAAACTGTACTGCTGCTTCTCCAGTGTGGATTGCAGTTTGTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATTCCCTGCATAAAGGTTGGATCCTATTGGATTGGCCTACTCGTTATAAAATTGCACTGGGGATTGCACAGGGTTTGGCATACCTCCACCATGATTTGCTTCTCCCTATTATCCATCGAGACATCAAGTCAACTAATATCCTTTTGGATGTTGATAACCAGCCAAAGGTTGCAGACTTTGGGATTGCCAAGGTTTTACAAGCAAGAGGAGGGAAGGATTCCACCACAACTGTTATTGCAGGATCATATGGTTACCTAGCCCCAGAATTTGCATATTCATCAAGGGCCACCACCAAGTGCGATGTATACAGTTTTGGGGTGATTTTGATGGAACTGTTAACTGGGAAGAAGCCCGTGGAGGCAGAATTTGGAGAGAACAGAAATATTGTTTTTTGGGTTTCCAACAAAGTAGAGGGCAAGGAAGGAGCTAGACCAAGTGAGGTATTTGACCCGAGGTTATCATGTTCATTCAAGGATGACATGATCAAAGTTTTGCGGATTGCCATTCGATGCACCTATAAAGCCCCAACAAGTAGACCAACCATGAAAGAGGTTGTTCAACTTCTGATTGAGGCAGAGCCACGCGGTTCCGATTCATGCAAGTTGTCAACCAAAGATGTATCAAATGTCACAGTAATAAAGAAACCATATGAATAATAAATAATAATTATAATTTGAACAGCTTAAGGGGTAAGAGGAAGCACATTACAACTAAGATAAGCAGTCTCTCAAGATGTCACCGAGAGACTCATTGTAGAGTAGATAAAAAAATTAGTATAATCTTATTTTTCTAGACAAGTAGTTTGTAGATTCTATCTTTGACTCTGAGTCTTCTCCCTATAGTTGCTCCCTTTTACTGTCTGAGTTTTGACTTTTTGTAAAAATTTAAGTCAGATTGTTATCCAAGCTTTTCGGTAATGTACAGTATCTATATTTTATAGGACCCACACTCGAAAGCA 3317 0.4359 CLIINMDTGLSLLPQLIHSTIPSYIHLLHPSPCCNLFTNHITSSQNESLSLHHPLLYYYTHRFRFTLRVTAYYCKESFFSLMKESLPGKYPSNWEVGKPVCDFTGVTCNTKGHVIKLDLSYWSSLSGTFPPDTCSYLPRLRVLRLGHTRFKFPMDTILNCSHLEELNMNHMSQTGTLPDFSPLKHLKVLDLSYNLFTGQFPMSVFNLTNLEVLNFNENGGFNLWQLPSDIDRLKNLRSVVLTTCMVHGQIPATIGNISSLVDLELSGNFLTGQIPKELGQLKKLQQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFTGSIPASVCRLPKLQVLQLYNNSLTGEIPGAIENSTALRMLSLYDNFLEGQVPTKLGQFSRMLVLDLSENKFSGPLPTQVCRGGTLQYFLVLDNMFSGEIPDSYTNCMMLLRFRVSNNRLEGSIPAGLLGLPHVSIIDLSSNNLTGPIPEISRNSRNLSELFLQRNKISGIITPTISRAINLVKIDFSYNLLSGPIPSEIGNLRKLNLLMLQGNKLSSSIPGSLSSLDSLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNLLSGPIPPKLIKGGLVESFAGNPGLCVLPVYANSSDKNFPVCASTYKSKRINTIWIAGVSVVLIFIGSALFLKRRCSKDTAAVEHEDTLSSSFFSYDVKSFHKISFDQREIIESLVDKNIMGHGGSGTVYRIELKSGDIVAVKRLWSHRSKDSAPEDRLFVDKALKAEVETLGSIRHKNIVKLYCCFSSVDCSLLVYEYMPNGNLWDSLHKGWILLDWPTRYKIALGIAQGLAYLHHDLLLPIIHRDIKSTNILLDVDNQPKVADFGIAKVLQARGGKDSTTTVIAGSYGYLAPEFAYSSRATTKCDVYSFGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVFDPRLSCSFKDDMIKVLRIAIRCTYKAPTSRPTMKEVVQLLIEAEPRGSDSCKLSTKDVSNVTVIKKPYE 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02346 1004 Gene3D Ribonuclease Inhibitor 222 325 IPR032675 -
Pste2g02346 1004 Gene3D Transferase(Phosphotransferase) domain 1 780 998 - -
Pste2g02346 1004 SUPERFAMILY Protein kinase-like (PK-like) 681 975 IPR011009 -
Pste2g02346 1004 FunFam Leucine-rich repeat receptor-like protein kinase 223 326 - -
Pste2g02346 1004 Gene3D Ribonuclease Inhibitor 76 221 IPR032675 -
Pste2g02346 1004 ProSiteProfiles Protein kinase domain profile. 695 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02346 1004 SMART LRR_typ_2 450 473 IPR003591 -
Pste2g02346 1004 SMART LRR_typ_2 378 402 IPR003591 -
Pste2g02346 1004 SMART LRR_typ_2 207 233 IPR003591 -
Pste2g02346 1004 SMART LRR_typ_2 522 545 IPR003591 -
Pste2g02346 1004 SMART LRR_typ_2 137 160 IPR003591 -
Pste2g02346 1004 SMART LRR_typ_2 330 354 IPR003591 -
Pste2g02346 1004 SMART LRR_typ_2 257 281 IPR003591 -
Pste2g02346 1004 SMART LRR_typ_2 546 570 IPR003591 -
Pste2g02346 1004 FunFam receptor protein-tyrosine kinase CEPR1 678 779 - -
Pste2g02346 1004 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 295 975 - -
Pste2g02346 1004 Gene3D Ribonuclease Inhibitor 336 617 IPR032675 -
Pste2g02346 1004 Gene3D Phosphorylase Kinase; domain 1 678 779 - -
Pste2g02346 1004 FunFam Receptor protein-tyrosine kinase CEPR1 330 616 - -
Pste2g02346 1004 Pfam Protein kinase domain 697 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02346 1004 SUPERFAMILY RNI-like 113 393 - -
Pste2g02346 1004 SUPERFAMILY RNI-like 297 619 - -
Pste2g02346 1004 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 780 993 - -
Pste2g02346 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Pste2g02346 1004 SMART serkin_6 695 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02346 Pste-Chr2 23518227 23522259 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02346 75 982 Receptor kinase-like Gene Family AT5G49660 64.590 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste2g02346 Pkinase 5.2e-47 CL0016