Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02315 ATGGAGGAGGATGAGATTCAAGCACAGGCGTGTAAGTTCCCTAGAGTTGGAAACGGTAGGAGTGAACAATATCAAGAGGAGGAAGAAGAGGGAGACGTAAGAAGAAGAGGCGTTGGAGGTGGAGGAGGAAGTGATGCTAGCACAAACCATTTCCAAAGTAGTTGGCACCACTCTTCTAGAATCATAAGGGTGTCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAGGTGATGACCTCAAAGGGGTTAAGAGACAGAAGGGTTAGACTTTCTGTGACCACAGCCATTCAGTTCTATGACCTTCAAGATCGCTTGGGTTATGACCAACCTAGTAAAGCTGTGGAATGGTTAATCAAAGCTGCTTCAGAAGCTATCTCAGAGCTTCCTTCCCTCAACAGCCCTTTTCCTGAAACCCCTAGGCAGCCAAGTGATGAGAAAAGGCCAACTAGTGGTCAACAACAAGGTTTTGATGAGGCAGATGGAGACACCAATTACAACCAAAACCAAAGCCAGAACCTCTCTCTCTCCAAGTCTGCTTGTAGCAGCACTTCCGAGACAAGCAAGGGCTCAGGCTTGTCCCTCTCAAGGTCTGAGATCCGTGTGAAGGCAAGAGAGAGGGCAAGGGAAAGAGCAGCAAAAGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGAAAGAGAACGAGTCTAGCATTGCACATCACCACCACAATGTGAACAACCCCAACCACATGTCTCATACCGCTTCCTTCACGGAGCTCCTCACCGGTGGGATTGGGAGCAGAGTAACGGTTAACCCCACAACAACAACAAGTCCTAATGGATCATCAGTTCATCAGATCCATGATGGTGGTGACCATGAGGGAAGTCTGTTCAACAAGGGAAGGCAACAACAGCATTGGTCTCCAACAGTGACCCCTATGGACTACTTCAGCTCAGGCCTCCTGGTGGGGCCTTCTTCATCATCTGCAAGAACTCAACACCAATCTTCTTCAGGACAGTTCCAACTGGGCCATGCCCTTCCCATCTCACCATTCAGTGGAGAAAACCACTCAGACCAGCTGCATCATTTTTCCTTCATGCCAGACCACCTTAACATGCCAGCTGTGGTCACTTCTTCCTCTTCTGCTTCTCAACCCAGCGGGGGTGACAATTACAACCTCAACTTCAGCATCTCTTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCGTTTTTGCCTCACCTCCAGAGGTTTCAACCTTTAGACGGATCGTCCAATCTACCTTTCTTTATAGGAGCTCCTGCTCCTTCTTCAGCTGCTCCAACCATGGACAACAACAACAGCAACCATCACCACCCTCAGTTCTCACCTGTCTTCGATGCTCGCTTGCAACTTTGCTATGGCGATGGAACCAGGCATTCTGATCACAAGGGGAAAGGCAAGAACTAA 1446 0.4924 MEEDEIQAQACKFPRVGNGRSEQYQEEEEEGDVRRRGVGGGGGSDASTNHFQSSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASEAISELPSLNSPFPETPRQPSDEKRPTSGQQQGFDEADGDTNYNQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVKARERARERAAKEKEKEKEKEKEKENESSIAHHHHNVNNPNHMSHTASFTELLTGGIGSRVTVNPTTTTSPNGSSVHQIHDGGDHEGSLFNKGRQQQHWSPTVTPMDYFSSGLLVGPSSSSARTQHQSSSGQFQLGHALPISPFSGENHSDQLHHFSFMPDHLNMPAVVTSSSSASQPSGGDNYNLNFSISSGLAGYNRGTLQSNSPSFLPHLQRFQPLDGSSNLPFFIGAPAPSSAAPTMDNNNSNHHHPQFSPVFDARLQLCYGDGTRHSDHKGKGKN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02315 481 Pfam TCP family transcription factor 69 217 IPR017887 -
Pste2g02315 481 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 34 394 IPR005333 GO:0003700
Pste2g02315 481 MobiDBLite consensus disorder prediction 45 59 - -
Pste2g02315 481 MobiDBLite consensus disorder prediction 1 59 - -
Pste2g02315 481 MobiDBLite consensus disorder prediction 21 36 - -
Pste2g02315 481 ProSiteProfiles R domain profile. 197 215 IPR017888 -
Pste2g02315 481 ProSiteProfiles TCP domain profile. 70 128 IPR017887 -
Pste2g02315 481 MobiDBLite consensus disorder prediction 198 233 - -
Pste2g02315 481 Coils Coil 201 229 - -
Pste2g02315 481 MobiDBLite consensus disorder prediction 128 245 - -
Pste2g02315 481 MobiDBLite consensus disorder prediction 128 194 - -
Pste2g02315 481 MobiDBLite consensus disorder prediction 291 305 - -
Pste2g02315 481 MobiDBLite consensus disorder prediction 259 278 - -
Pste2g02315 481 MobiDBLite consensus disorder prediction 259 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02315 Pste-Chr2 23224100 23225545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02315 48 481 TCP Transcription Factor Family AT4G18390 43.297 4.08e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste2g02315 TCP 2.3e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02315 2 23224100 23225545 Pste2g02315 2 23224100 23225545 ECH