Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02310 GAGAATAATTATATAAGAAGGTGAGGGGTGTTGAAGAAAAGTATGAAGTATGATCGGAGTAGGGCAGGTATGAGATTCCAATAATAGTGAAAAGAGAGGAGGAGGCCCACAGAAGGTCAAGTGCTAAAGGAAGCAACAATAAATACCTTCTCCAAAGGGCAAAAGGGAGACGCAAAATCCTAATTCTATGAACCCTGCTGTATGGAGAGTGGTGGACGGGATTCTGGGATGAGTTCAGACACTCAAAGAACTTCAATGAGCAACGAAAGCGTGTGCAGCACCAGTTTCAGCCGCCTCTCATTCGACCTCCCACTTTCCTCCTCCTCGCCGGAGACCCACTTAGTAAAGCCACACCGCTGCTCCGACTTCGCATACACGGCCATCCTCCGCCGGAAGTGCGCACTCACCTTCAGGGACTTCCACCTGCTCCGCCGCATCGGCGCCGGAGACATCGGCACCGTCTACCTATGCCGGCTGCGGCAGGAGGGAGAAGAGGGGTGGTTGTACGCCATGAAGGTGGTGGACAAGGAGGCGCTGGCGCAGAAGAAGAAAGCGGAGAGAGCGGAGATGGAGAGAAAGATTCTGAAGATGGTGGACCATCCATTCCTGCCCACGCTGTACGCGGAGTTCGAGGCGTCAAATTTCTCCTGCATTGTCATGGAGTATTGCTCCTCCGGGGACTTGCACTCCCTTCTCCACAACCATCCCAACAACCGATTCTCTCTCTCCTCTTCCAGGTTTTACGCGGCTGAAGTACTGGTGGCCTTAGAGTATCTCCACATGCTGGGAATCATCTATAGGGATCTAAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCAGATTTCGATCTTTCTCTATGCTCTGATGCTATCCCAGCGGTTGAATCCCCTGACTGTTCGCTAGATCCAGCGTTCGCACCTGCGTTACGCTATACTCGCCAGTACTCTACCCCCTTCTCGTGCTTCTCCAACCGCGTGTTCCGGTCGAGGAAGGTCCAGACAGTCGAACCGAACCGGCTTTTCGTGGCCGAACCGGTGGGGGCCCGATCGTGCTCCTTCGTTGGGACCCACGAGTACGTATCGCCGGAGGTGGCCTCCGGGAACTCCCACGGCAATGCCGTGGACTGGTGGTCCTTCGGGATATTCATCTATGAGATGGTGTACGGTGGAACACCCTTCGCGGGCCCATCGAACGAGGCTACGCTGCGCAACATCATAAAAAAGCCCCTGGCCTTTCCCACCGCCACGCCCTCCAGCACGCTTGAAATGCACGCGCGGGACCTGATATCTGGGTTGCTCAACAAAGACCCGAACCGGAGGCTCGGGTCGAAGAGAGGCGCCGCCGACGTTAAGAAGCACCCCTTCTTCGGTGGGCTCAATCTGGCGCTCATACGAATGGTCACGCCACCGGAGGTTCCGTCACTCAGAAGGCACAAAACGATGCCGTTTTACCCCGTTAACGATAACGCTAATAACAGTAGACACCACCTAACGCCCTTTGATTACTTTTGA 1527 0.5455 MESGGRDSGMSSDTQRTSMSNESVCSTSFSRLSFDLPLSSSSPETHLVKPHRCSDFAYTAILRRKCALTFRDFHLLRRIGAGDIGTVYLCRLRQEGEEGWLYAMKVVDKEALAQKKKAERAEMERKILKMVDHPFLPTLYAEFEASNFSCIVMEYCSSGDLHSLLHNHPNNRFSLSSSRFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPDCSLDPAFAPALRYTRQYSTPFSCFSNRVFRSRKVQTVEPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGGTPFAGPSNEATLRNIIKKPLAFPTATPSSTLEMHARDLISGLLNKDPNRRLGSKRGAADVKKHPFFGGLNLALIRMVTPPEVPSLRRHKTMPFYPVNDNANNSRHHLTPFDYF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02310 441 ProSiteProfiles Protein kinase domain profile. 73 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02310 441 Coils Coil 106 126 - -
Pste2g02310 441 PANTHER FLIPPASE KINASE 1-RELATED 17 413 - -
Pste2g02310 441 FunFam serine/threonine-protein kinase D6PK-like 286 412 - -
Pste2g02310 441 Gene3D Transferase(Phosphotransferase) domain 1 156 223 - -
Pste2g02310 441 SUPERFAMILY Protein kinase-like (PK-like) 53 423 IPR011009 -
Pste2g02310 441 SMART serkin_6 73 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02310 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pste2g02310 441 MobiDBLite consensus disorder prediction 1 22 - -
Pste2g02310 441 FunFam Serine/threonine-protein kinase OXI1 160 227 - -
Pste2g02310 441 Gene3D Phosphorylase Kinase; domain 1 71 155 - -
Pste2g02310 441 Pfam Protein kinase domain 73 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02310 441 Pfam Protein kinase domain 289 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02310 441 Gene3D Transferase(Phosphotransferase) domain 1 287 412 - -
Pste2g02310 441 FunFam protein kinase PINOID 2 71 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02310 Pste-Chr2 23140375 23142818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02310 7 441 AGC Kinase Gene Family AT2G34650 65.909 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste2g02310 Pkinase 1e-35 CL0016