Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02292 ATGTCCCTCTTCCTTCTTACACTTTATTTTCACTTGTTTGTGTCACTCACCACCACATTACCCTCCCAAGTAATTTCACAATCTGAACAAATAATCCTACTCACCCTCAAACACGAACTGGGGGACCCACAGTCTCTCCGATTATGGAATCCGTCACCCTCGGCGCCGTGCGACTGGCCGGAGATTCGCTGCGCTGGTGGAGCCGTCACGAAGCTCCTCCTCTCCCGTAAAAACATCACAACCAATAATATCACTTCCACAATCTGCAACCTCAAAAACCTGATCAAGCTTGACCTCTCCGGCAACTCCATCGCCGGTGAGTTCCCGACAGCGTTGTACAACTGCTCCAACCTCCAATACCTCGATTTGTCTGGTAACAAACTTGCCGGACCAATCCCCGCTGACATCGACCGCCTCAAAAAGCTCACATACCTCAACCTCGGCGATAACTTATTCTCCGGCGAGATCCCGGCGGCAATTGGAAGCCTGGCGGAGCTTGAAACCCTATCCCTTGAGCAAAACAAGTTCAACAGAAGCATCCCGGGGGAAATCGGAAACTTGTCGAATCTGGAATTTTTGGGTTTGGCTTATAACGGAGAGCTTGCGCAAGGGAAAATCCCGTTGGAGTTTGCCAAGTTAAAGAACTTGAGGCTCCTGTGGATGACGCAGTGTAACTTGATCGGAGAGATTCCGGAATATATAGGGAATAATTTAACGAAACTGGAACAGTTGGATTTGTCGAGGAACAACTTAACAGGGAGCATTCCTGGGAGTTTGTTCTCGCTGAGGAAGTTGAAGTCTTTGTACCTGTACTATAACAGGTTGTCCGGTGTGATACCTAGACCTACGATGCAGACTTTGAATTTAACTGAACTTGACTTGGCCAAGAACAATTTGACAGGTTCCATACCCCCTGAGTTTGGAACCATGAAGAGTTTAAGAACCTTGCACTTGTATTCCAACCATTTGTCTGGTGAGATTCCGACAAGTTTAAGCTTGCTTCCTAGTCTTGAGTATTTCAGGGTTTTCAACAATAGCTTGAGTGGAACACTGCCTCCGGAACTAGGCCTGCATTCCAGGCTTATCGGGATTGAGGTTTCAGAGAATCAGCTCAGTGGTGGGTTGCCGGAACATTTGTGTGCCGGGGGTGCTCTCATCGGTATCGTGGCTTTTTCCAACAACCTTAGTGGGGTTTTGCCTAAATGGCTTGGGAGTTGTCCTTCTCTGGCCACGGTTCAAGTTTTTAATAACAACTTTTCCGGGGAGGTTCCTCTGGGTATGTGGACTTCGGCCAACCTTTCTTCTTTGGTTTTGAGCAACAACTCCTTTTCTGGGCCTCTTCCTGGTAAGGTGTTTTGGAATATAACCAGGATTGAGATCGCCAACAACAACTTCTCCGGTGGGATATCTGTTGGGATTACTTCAGCCGCCAATTTGGTTTATTTTGATGCCAGAAACAACATGCTTTCGGGTGAAATTCCAAGCGAACTCACTCGTCTTTCTCGGCTTAGTACTCTCATGCTTGATGGTAACCAACTTTCTGGTGCACTTCCATCTGAGATTATTTCGTGGGAGTCACTTAGTACTATGACACTCTCAGGAAACAAACTTTCTGGTCCGGTTCCTATTTCTTTCACTGCTCTTCCTAGCCTGGCTTACTTGGACTTGTCACAAAATAACATATCAGGTGAAATCCCACCTCAGTTTCATAGATTGAGGTTGGTTTTTCTCAACTTGTCGTCCAACCAGATATCAGGAAAAATCCCTGATGAGCTTAACAACCTCGTGTTTGAAAACAGTTTCTTGAACAATCCTCATCTGTGTGCCTACCATCCAAACGTCAACCTTCCAAACTGCATCACCACAAGCCCACCACGCTCAAGCAATTCGTCTTCGAAATCACTTGTGCTGATTCTGGCAGCCACAGTTTTTGTGTTGCTGATCACAGCCTCCTTGGTCTTCTGTACTTTGAAAATGCAATGGCCGAAAAAGCACTCCGGGCATAAGCTCTCAACGTGGAGGGTCACTTCATTCCAGAAGATTGATCTCAGAGAAATTAACCTCTTCTCGGGTTTGACAGACAATAACCTCATAGGAAGTGGAGGGTTTGGGAAGGTTTACCGGATTGCTTCGAATCGTCCGGGCGAGTATGTTGCAGTGAAGAAGATTTGGAATCGCAAAGATGTGGATGACAAGTTGGAGAAAGAGTTCATCGCTGAGGTTGAGATCTTGGGCAATATTCGGCACTCGAATATAGTGAAGCTTTTGTGTTGTTTTGCAAATGAGGACTCCAAACTTCTTGTTTATGAATACATGGAAAATCAGAGCCTGGACAGATGGCTTCATGGAAGGAAGAAAACATCACCTAGTGGGTTGAGTTGGCCAACGAGATTGAATATTGCCATAGGAGCTGCACAAGGTTTGTGTTACATGCACCACGAGTGCTCACCCCCTGTCATCCACCGAGATGTCAAATCTAGCAATATACTGTTGGACTCAGACTTCAGAGCTAAAATAGCAGATTTTGGGCTCGCCAAGATCTTGGCAAAGCCCGGGGAACTACACACCTTGTCTGCTCTAGCAGGCTCTTTTGGATACATTCCACCGGAATATGCCTATTCAACTAAGATTAATGAGAAAGTTGATATATATAGCTTTGGAGTTGTTCTCTTGGAGCTTGTGACAGGAAGAAAGCCTAACAAAGGAGACGAGCATGCATGCAGCCTAGTTGAATGGGCATGGGACCATTTTAGTGAAGGGAAGACCCTTGCTGATGCATTCGATGAGGATGTCAAAGATCCACGTTATGCCGAAGAGATGAAGAGTGTATTCAAACTAGGTCTCCTTTGCACAAGCTCGTTGCCCTCAACTAGGCCTTCCACGAAGGAGATTTTGCAAGTTCTTCGTTGGTGTTGTCATTCCGGTTCGTCGCGTACAAGAGTGGGAAGCGAGTTTGATATCACTCCTCTTCTTAGTGACACAAGGTACGTCTATAGTTACAAGGAGAGTAATGCAGCAAGCAATAACTCATCGTGGTGATACAAGGACAATTTTTCTAGTTACATGCTGCATGGTAAAAATGAAGAAAGCAGCTTGAACGGTGTGTAAATCTAGTATTATGCGTGAAAGAACATATTGCCTTCAAATGAACTCTTGAAAAATATTACTTTGAGA 3174 0.4556 MSLFLLTLYFHLFVSLTTTLPSQVISQSEQIILLTLKHELGDPQSLRLWNPSPSAPCDWPEIRCAGGAVTKLLLSRKNITTNNITSTICNLKNLIKLDLSGNSIAGEFPTALYNCSNLQYLDLSGNKLAGPIPADIDRLKKLTYLNLGDNLFSGEIPAAIGSLAELETLSLEQNKFNRSIPGEIGNLSNLEFLGLAYNGELAQGKIPLEFAKLKNLRLLWMTQCNLIGEIPEYIGNNLTKLEQLDLSRNNLTGSIPGSLFSLRKLKSLYLYYNRLSGVIPRPTMQTLNLTELDLAKNNLTGSIPPEFGTMKSLRTLHLYSNHLSGEIPTSLSLLPSLEYFRVFNNSLSGTLPPELGLHSRLIGIEVSENQLSGGLPEHLCAGGALIGIVAFSNNLSGVLPKWLGSCPSLATVQVFNNNFSGEVPLGMWTSANLSSLVLSNNSFSGPLPGKVFWNITRIEIANNNFSGGISVGITSAANLVYFDARNNMLSGEIPSELTRLSRLSTLMLDGNQLSGALPSEIISWESLSTMTLSGNKLSGPVPISFTALPSLAYLDLSQNNISGEIPPQFHRLRLVFLNLSSNQISGKIPDELNNLVFENSFLNNPHLCAYHPNVNLPNCITTSPPRSSNSSSKSLVLILAATVFVLLITASLVFCTLKMQWPKKHSGHKLSTWRVTSFQKIDLREINLFSGLTDNNLIGSGGFGKVYRIASNRPGEYVAVKKIWNRKDVDDKLEKEFIAEVEILGNIRHSNIVKLLCCFANEDSKLLVYEYMENQSLDRWLHGRKKTSPSGLSWPTRLNIAIGAAQGLCYMHHECSPPVIHRDVKSSNILLDSDFRAKIADFGLAKILAKPGELHTLSALAGSFGYIPPEYAYSTKINEKVDIYSFGVVLLELVTGRKPNKGDEHACSLVEWAWDHFSEGKTLADAFDEDVKDPRYAEEMKSVFKLGLLCTSSLPSTRPSTKEILQVLRWCCHSGSSRTRVGSEFDITPLLSDTRYVYSYKESNAASNNSSW 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02292 1012 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Pste2g02292 1012 Gene3D Ribonuclease Inhibitor 181 284 IPR032675 -
Pste2g02292 1012 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 384 622 - -
Pste2g02292 1012 Gene3D Transferase(Phosphotransferase) domain 1 773 983 - -
Pste2g02292 1012 Gene3D Ribonuclease Inhibitor 456 697 IPR032675 -
Pste2g02292 1012 FunFam Receptor-like protein kinase HSL1 isoform A 26 178 - -
Pste2g02292 1012 Pfam Protein kinase domain 694 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02292 1012 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 282 379 - -
Pste2g02292 1012 ProSiteProfiles Leucine-rich repeat profile. 240 262 IPR001611 GO:0005515
Pste2g02292 1012 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Pste2g02292 1012 Pfam Leucine rich repeat 141 198 IPR001611 GO:0005515
Pste2g02292 1012 Pfam Leucine rich repeat 526 584 IPR001611 GO:0005515
Pste2g02292 1012 Pfam Leucine rich repeat 223 275 IPR001611 GO:0005515
Pste2g02292 1012 SUPERFAMILY L domain-like 288 597 - -
Pste2g02292 1012 SMART LRR_typ_2 310 333 IPR003591 -
Pste2g02292 1012 SMART LRR_typ_2 500 524 IPR003591 -
Pste2g02292 1012 SMART LRR_typ_2 163 187 IPR003591 -
Pste2g02292 1012 SMART LRR_typ_2 334 358 IPR003591 -
Pste2g02292 1012 SMART LRR_typ_2 548 571 IPR003591 -
Pste2g02292 1012 SMART LRR_typ_2 91 115 IPR003591 -
Pste2g02292 1012 SMART LRR_typ_2 238 262 IPR003591 -
Pste2g02292 1012 SMART LRR_typ_2 213 237 IPR003591 -
Pste2g02292 1012 SMART serkin_6 692 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02292 1012 SUPERFAMILY L domain-like 31 378 - -
Pste2g02292 1012 SUPERFAMILY Protein kinase-like (PK-like) 686 968 IPR011009 -
Pste2g02292 1012 Pfam Leucine Rich repeats (2 copies) 92 128 IPR025875 -
Pste2g02292 1012 Gene3D Phosphorylase Kinase; domain 1 698 772 - -
Pste2g02292 1012 Pfam Leucine rich repeat N-terminal domain 32 64 IPR013210 -
Pste2g02292 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 204 963 - -
Pste2g02292 1012 FunFam Receptor-like protein kinase HSL1 672 771 - -
Pste2g02292 1012 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 181 279 - -
Pste2g02292 1012 ProSiteProfiles Protein kinase domain profile. 692 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02292 1012 ProSitePatterns Protein kinases ATP-binding region signature. 698 722 IPR017441 GO:0005524
Pste2g02292 1012 FunFam Kinase family with leucine-rich repeat domain-containing protein 772 984 - -
Pste2g02292 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Pste2g02292 1012 Gene3D Ribonuclease Inhibitor 285 455 IPR032675 -
Pste2g02292 1012 PRINTS Leucine-rich repeat signature 118 131 - -
Pste2g02292 1012 PRINTS Leucine-rich repeat signature 238 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02292 Pste-Chr2 23023142 23026400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02292 18 991 Receptor kinase-like Gene Family AT5G25930 53.776 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste2g02292 Pkinase 4e-50 CL0016