Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02291 CTCGTACACACTCTCTTTCTCCCTCTTAAAAGGACACCCCAAAAATAATGGCGGTGGAGTTGTGATTGATTGGAAGAGAGAGAGAGAGAGGGGGAGGGAGGGGTAAAGCTATAGTAGCATGGTCACCATTCACCAAGTTAGAAGTTAGAACTTTAGAAGTAGAGAGTAGTAGTAGTAGCATGAACATGACTAATGACAAATCACTAATGACCATGACCACAAAGCATAACCATAAAAACAAAGCACACAACCACTGCTTCTTCTACTTCCCATTTTTCCATTACCGGAAATGAAATGAGCCAAACGCTGACTCTGGATTTCGTACTCCTTACCCAGCACTCTTTCCTCTCTGTCAAACACTGATTCCTTACCCCCTCTCTCTCTCTCTTCTCTGATTAACCGTTATTTCCCCTGAGATCTGTTTGCTTTTCGACTTTCTTCCGCTTCTGCGTCTCGATGCTCTATCAGATTGTTGCTAAATTTGGCAGTGAAGGCCACGTGTGCTTCTGAGAGATTGTCTTCTGTGTAATGAGGACTTCCGTTGAGGATAGGACCCTGGGGTGTTGGGGGTTCAGGAAAACTAGAACCGAATGAGGCGTAAAGCAATTGTCTTTTCTTGTGACACTGGTTTTGGTTGAGCTTTCAAGGGTGGGAATTTTGTGGGATTGTAATGGGTTTTAAGGGGTGTCAAGTACTGAGGCAAAGATAGCAAAAAATGTTATTCTGCAGTTGGCAGGAAGGAAGACAAGACAAGACAAGGCTTCTTTTGTGGTGGAGGGTGTCATTTTGTGCGAATTTTATTGCCTAATTCATAGTGTCGTGATTGTGAACTCAGTTTTGAGGTTACTAATTTGCTTGACCCTCAAATGAGACTCTCTTCAACTAGTTTTAGTCCTCCACCCCAGGAAGGGGAAAGGCGAGTTCTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCCCTTGTCTCTTTACCAGCACTTGGAAGCCGCGTGGTATACTTTCCACAAGGTCACAGTGAACAGGTGGCTGTGTCGACCAACAAGGAAGTAGATGCTCATATCCCAAACTATCCAAGCTTGCCTCCTCAACTCATTTGTCAACTTCATAATATGACTATGCATGCTGATGCTGAGACTGATGAAGTGTATGCACAGATGACCTTGCAACCTCTGAATCCTCAAGAGCAAAAGGAGGCATACCTGCCAGCAGAGTTGGGCACTCCAAGTAAACAGCCAACAAACTATTTCTGCAAAACTTTGACTGCTAGTGACACAAGCACTCATGGGGGGTTCTCTGTGCCTCGTCGAGCAGCTGAAAAAGTTTTTCCTCCATTGGATTTCTCTCAACAGCCTCCTGCTCAAGAATTAATTGCACGGGATTTGCATGGAAATGAATGGAAATTTAGACATATCTTCCGGGGCCAGCCCAAAAGGCATCTACTTACAACTGGATGGAGTGTTTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCTGTGCTGTTTATCTGGCAAGTAGTTTTATTGTTTCCTGCTCCCCAAAGTGACATGCTGCTATATCCTGGACAACATTGA 1574 0.4435 MRLSSTSFSPPPQEGERRVLDSELWHACAGPLVSLPALGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWQVVLLFPAPQSDMLLYPGQH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02291 235 SMART B3_2 127 224 IPR003340 GO:0003677
Pste2g02291 235 CDD B3_DNA 126 215 IPR003340 GO:0003677
Pste2g02291 235 Pfam B3 DNA binding domain 127 214 IPR003340 GO:0003677
Pste2g02291 235 Gene3D - 125 221 IPR015300 -
Pste2g02291 235 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 214 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste2g02291 235 SUPERFAMILY DNA-binding pseudobarrel domain 112 217 IPR015300 -
Pste2g02291 235 ProSiteProfiles B3 DNA-binding domain profile. 127 227 IPR003340 GO:0003677
Pste2g02291 235 FunFam Auxin response factor 125 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02291 Pste-Chr2 23020393 23023212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02291 1 216 B3 DNA Binding Superfamily AT1G30330 88.991 1.62e-137 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste2g02291 B3 4e-21 CL0405