Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02290 ATGCCTTCTTCGGTGTTGTCAAGTGATAGTATGCATTTGGGGCTTCTTGCTGCAGCAGCTCATGCAGCTGCAACAAATAGTCGTTTCACCATTTTCTATAACCCACGTGCTAGCCCTTCAGAATTTGTCATACCCTTGGGGAAGTATGTTAAAGCAGTGTATCATATTCGAGTTTCAGTTGGTATGCGGTTCAGGATGCTGTTTGAAACAGAGGAGTCAAGTGTGCGAAGGCACATGGGTACAATAACTGGCATCAGTGACCTGGATCCTGTCAGGTGGCCAAACTCACACTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCTACTGCTGGAGAGAGGCAACCTAGAGTATCTCTATGGGAAATTGAGCCATTAACTACATTTCCTATGTATCCATCATCATTCCCCCTTAGGCTTAAACGACCATGGCCTCCTGGACTACCTTCATTCCATGGTATAAAGGATGATGATTTTGGCCTGAATTCACCTTTCCTGTGGCTCAGAGACACTGATAGAGGGCTCCAGTCTCTTAACTTTCAGGGGATCGGTATTAATCCTTGGATGCAGCCAAGATTTGATCCCTCCATGTTGAACATGCAAACAGATATGTATCAAGCAGCAGCTGCTGCTGCTGTTCAGGACATGAGGAGTTTAGATCCTTCCAAACAGCATTCTGCTTCCTTACTTCAATTTCAGCAACCACAGAACTTCCCAAACAGGACTGCTGCTTTAGTGCAGGCCCAGATGTTGCAGCATTCACAACCTCAGCATATTTTTGGAAATAATCAAGAGAATCAGCATTCTCCACAATCTCAGCCACAAACTCAGGCTCATCTTCAGCAACATCTACAACATCAACACTCGTTCAACAACAGTCAGCGTCATCAACACCAGCAACAGCAGTCACAGCAGCAGCAAGTACTAGATAATCAGCAAATTTCAAATGCAGTCTCCACAATGTCCCAGTTTGTTTCAGCACCTCAACCTCAATCACCACCAATGCAAGCTATTTCTTCCCTGTCGCAAAATTTTTCTGATTCAAATGGGAATTCTGTGACTACTATTGTTTCTCCCCTGCACAGTATCTTGGGTTCTTTTCCCCAGGATGAAACGTCTCACCTCCTGAACCTTCCTAGAACAAGCACTTGGATTCCTGTTCAAAACTCAAGTGGATGGCCCTCAAAGCGTGTTGCACTGGATCCTCTCCTTTCTACCGGAGCCTCTCAGTGTGTTCTACCTCAGGTGGAGCAGCTAGGGCAGCCACAGAGTACGGTGTCTCAAAATGCTATTACTTTACCGCCTTTTCCTGGTAGGGAGTGCTCAGTAGATCAAGAAGGGAGCAATGACCCACAAAACCATCTCTTATTTGGTGTTAATATAGAGCCATCCTCCCTTCTTATGCCAAATGGGATGTCAAACCTTAAGGGGGTCAGCGGCAACAGTGACTCCTCAACTTTGCCATATCAATCTTCTAATTATCTTAATGCCACCACAGGCACTGATTCTTCGTTGAATAATGGAATAACACACAGCATAGGTGGCGGATCGGGTTTCCTGCAGAGTCCAGAAAATGCAGGACAAGGAAACCCACTAAACAAGACCTTTGTGAAGGTTTATAAGTCAGAGTCCTTTGGAAGGTCATTGGATATCACTAAATTCAGCAGCTACAATGAGCTGCGTAGTGAACTCGCACGAATGTTTGGCCTCAAAGGCGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTAGACCGAGAGAATGATGTTCTTCTCCTTGGTGATGGCCCTTGGCCGGAATTCGTAAATAGTGTATGGTGCATAAAGATACTTTCACCCCAGGAAGTGCAGCAAATGGGCAACACTGGCCTTGAGCTGTTGAACTCGGTTCCAATTCAAAGGCTCTCTAATAGCATTTGTGATGACTATGTGAGCCGTCAAGACCCAAGAAATTTAAGCACTGGGATAACAGCCGTAGGGTCTTTAGACTACAGAAAGATATGACTGTTAATAGTCTGCCCTTCTATCCCATTTAATATCAATATTACCCTTGCTTCTCAACCCTTTGTGTACGGTTGGAAGCACTTGCCTAAATGTAGTTTATATAGCTTACTCTTTATTAGCCTTTGGATTTTTGTTTTTCTGTTTTTTCCTGTTAGGACAATTCATAAAATATTACTGTAACTATATGGCATCTAGTCATTGTGCTAGCTACAATATATACGATACTTAATCCTTTAGGAAATCAATGCGTGAGATAGTTATCTTAATTTGTAC 2283 0.4411 MPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLGKYVKAVYHIRVSVGMRFRMLFETEESSVRRHMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPPGLPSFHGIKDDDFGLNSPFLWLRDTDRGLQSLNFQGIGINPWMQPRFDPSMLNMQTDMYQAAAAAAVQDMRSLDPSKQHSASLLQFQQPQNFPNRTAALVQAQMLQHSQPQHIFGNNQENQHSPQSQPQTQAHLQQHLQHQHSFNNSQRHQHQQQQSQQQQVLDNQQISNAVSTMSQFVSAPQPQSPPMQAISSLSQNFSDSNGNSVTTIVSPLHSILGSFPQDETSHLLNLPRTSTWIPVQNSSGWPSKRVALDPLLSTGASQCVLPQVEQLGQPQSTVSQNAITLPPFPGRECSVDQEGSNDPQNHLLFGVNIEPSSLLMPNGMSNLKGVSGNSDSSTLPYQSSNYLNATTGTDSSLNNGITHSIGGGSGFLQSPENAGQGNPLNKTFVKVYKSESFGRSLDITKFSSYNELRSELARMFGLKGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNTGLELLNSVPIQRLSNSICDDYVSRQDPRNLSTGITAVGSLDYRKI 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02290 669 ProSiteProfiles PB1 domain profile. 533 617 IPR000270 GO:0005515
Pste2g02290 669 MobiDBLite consensus disorder prediction 259 309 - -
Pste2g02290 669 Gene3D - 57 129 - -
Pste2g02290 669 Pfam Auxin response factor 19 102 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pste2g02290 669 SUPERFAMILY CAD & PB1 domains 532 608 - -
Pste2g02290 669 FunFam Auxin response factor 529 622 - -
Pste2g02290 669 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 622 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste2g02290 669 Gene3D - 530 622 - -
Pste2g02290 669 Pfam AUX/IAA family 527 618 IPR033389 -
Pste2g02290 669 FunFam Auxin response factor 57 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02290 Pste-Chr2 23016483 23020048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02290 1 625 B3 DNA Binding Superfamily AT5G37020 44.427 1.48e-142 431