Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02276 ACAAACTTGTTTCGGACACATACCAAACCAACCTTGCGTTCTGTTGTTGCGCTGCTTGTTTTTGTGTTGTTGGTGCATAGTTACTACAAAGTAAGAGGGATTGCAAAAGTTGTTGGCAGTTATCATGTCGAGCAATTCGTTGAAGGAGATGAGGAACGGTGGTGAGATTGCTGTGACGGAGGATTATAGCAATGGTCACGGTGGGGGTGTGAGGGACTTGTATGGAGAGGATCGTGCCACAGAGGACCAGCTTATCACCCCATGGACCTTCTCTGTGGCCAGTGGATGCAGCTTGCTGAGAGATCCACGCTACAACAAGGGGCTGGCCTTTACCGAGGGAGAGAGAGATGCTCATTACTTGCGTGGTCTTTTGCCTCCAGCTATTTTCACTCAGGATCTTCAGGAAAAGAGGTTGATGCACAATCTTCGTCAGTATGAGGTTCCTCTGCATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTCTGATCGACAATGTTGAGGAACTTCTTCCTGTTGTTTATACCCCAACAGTTGGAGAAGCATGCCAGAAATACGGAAGCATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAAAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCTGAAAAGAGTATTCAAGTTATTGTTGTGACCGATGGTGAGCGTATATTAGGACTTGGAGATCTTGGTTGCCAGGGAATGGGGATTCCTGTTGGTAAACTTTCTCTCTATACTGCATTAGGAGGTGTCCGCCCTTCATCATGCTTACCTATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGGCTTAAACAAAAACGGGCAACTGGGCAGGAATATGTGGAGCTTCTGGATGAGTTTATGCGTGCAGTTAAGCAGAACTATGGGGAGAAAGTTCTCGTACAGTTTGAGGATTTCGCCAACCATAATGCATTTGATCTGCTGGCAAAATACAGCTCATCTCATCTTGTTTTTAATGATGACATACAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGGGGAACCTTAGCTGACCACACCTTCTTATTCCTAGGTGCTGGAGAGGCTGGAACTGGTATAGCAGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAACTCCAGTGACAGAGACCCGCAAGAAGATCTGGCTTGTGGATTCAAAGGGACTTATTGTTAGCTCTCGTCTGGAATCACTACAGCACTTTAAAAAGCCTTGGGCCCATGAGCATGAACCTGTAAAGGGACTTCTGGATGCTGTCAAGGCAATCAAGCCAACTGTTTTGATTGGATCATCTGGAGTAGGAAAGACATTTACCAAGGAGGTGGTCGAAGCCATGACATCTTTGAATGAGAAACCACTCATTCTTGCCCTTTCCAACCCTACTTCACAATCTGAGTGCACAGCCGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCAAGTGGAAGCCCATTTGATCCAGTTGAATATGAAGGAAAAGTTTTGGTTTCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGTTTGGGTTTGATCATCTCTGGTGCAATCCGTGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGACTGATTTACCCTCCATTCTCAAATATCAGAAAGATATCAGCCCACATTGCTGCTAATGTGGCGGCAAAGGTGTATGATCTAGGTCTGGCTTCTCATCTACCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGCCTACCGAAGCTACCGTTGAGTTCTGTTCTTTTTTTTTTTTAATATATTATGTGGCCTACTCCCTACAGTAGTACATGATGAGCTTCTTCTTAGGAACAGATTTATCATTTGCACTATTGTTTTTAGCTTTGTGGTATAAGGCAGTGCCATATGAACTTTGAAAAGTTGTTTATTCTTTCAAAGTTTTTATTTGTATTAAGAGGGAATAATATTATCATTAATATTTCAATTCCATTTTATGCCCAACTAATTTATAGAAGCATGAGCTTGTTGTT 2162 0.4325 MSSNSLKEMRNGGEIAVTEDYSNGHGGGVRDLYGEDRATEDQLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPAIFTQDLQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRATGQEYVELLDEFMRAVKQNYGEKVLVQFEDFANHNAFDLLAKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKTPVTETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKGLLDAVKAIKPTVLIGSSGVGKTFTKEVVEAMTSLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKVLVSGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAANVAAKVYDLGLASHLPRPKDLVKYAESCMYSPAYRSYR 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02276 593 ProSitePatterns Malic enzymes signature. 305 321 IPR015884 GO:0004471
Pste2g02276 593 FunFam Malic enzyme 307 593 - -
Pste2g02276 593 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 31 308 IPR046346 -
Pste2g02276 593 PRINTS Malic enzyme signature 184 213 IPR001891 GO:0004470|GO:0004471
Pste2g02276 593 PRINTS Malic enzyme signature 439 455 IPR001891 GO:0004470|GO:0004471
Pste2g02276 593 PRINTS Malic enzyme signature 305 321 IPR001891 GO:0004470|GO:0004471
Pste2g02276 593 PRINTS Malic enzyme signature 220 242 IPR001891 GO:0004470|GO:0004471
Pste2g02276 593 PRINTS Malic enzyme signature 280 298 IPR001891 GO:0004470|GO:0004471
Pste2g02276 593 PRINTS Malic enzyme signature 336 352 IPR001891 GO:0004470|GO:0004471
Pste2g02276 593 PRINTS Malic enzyme signature 124 148 IPR001891 GO:0004470|GO:0004471
Pste2g02276 593 CDD NAD_bind_1_malic_enz 309 587 - -
Pste2g02276 593 PANTHER MALIC ENZYME-RELATED 27 593 - -
Pste2g02276 593 SMART malic_2 118 299 IPR012301 GO:0004471
Pste2g02276 593 Gene3D - 307 593 - -
Pste2g02276 593 Pfam Malic enzyme, NAD binding domain 309 560 IPR012302 GO:0051287
Pste2g02276 593 FunFam Malic enzyme 52 306 - -
Pste2g02276 593 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 309 592 IPR036291 -
Pste2g02276 593 PIRSF ME 23 593 IPR001891 GO:0004470|GO:0004471
Pste2g02276 593 Pfam Malic enzyme, N-terminal domain 118 298 IPR012301 GO:0004471
Pste2g02276 593 SMART Malic_M_2 309 562 IPR012302 GO:0051287
Pste2g02276 593 Gene3D - 52 306 IPR037062 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02276 Pste-Chr2 22921205 22925768 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02276 2 22921205 22925768 Pste2g02276 2 22921205 22925768 ECH
Pste2g02276 2 22921205 22925768 Pste6g00804 6 3090607 3095432 ECH
Pste2g02276 2 22921205 22925768 Pste3g03608 3 28388192 28394039 ECH
Pste3g00478 3 2745436 2750270 Pste2g02276 2 22921205 22925768 ECH
Pste6g00804 6 3090607 3095432 Pste2g02276 2 22921205 22925768 ECH
Pste3g03608 3 28388192 28394039 Pste2g02276 2 22921205 22925768 ECH