Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02268 AAGGTCCGTGGAGCTGGAAGCAGTGTTAGTGTTATTGCAGCCTCCATCTGGTATCGTCCCAGTCAGTGTAAAGCCAACGGCGCGACGCCGCGAACCTCTGCTCCGCCGTCAGCTGCGACTGCTGCAAACGGCGCGCCTTCTCCCTGCAAAACACTGCGTTTTTGTTATTGTATTCTTTCAAAGCTTCTGATTTTCTATTACATACAGACGTGTACAAGGATGAGTTCTTTGCAGCAACAACCTATTTGGAACAAGGGGATGAATTTCCCTGCAAAAGGGTATGGCAGCAACAACGCGTTTCTACATCAAGTCAGGTTCTGTAATATGAAGCCATGCAAAACTTCTCATCTTGAAGGAAGTTTAGTCACTGGGAAGCCATCATCTCTATCTTTCTCTGTGCCTGAAATTGGAGGCGATGGAAGTAGCTTCCTGGACTATGGCTTGAGTGAAGCTGATCCAGAGGTTCGAGTAATTATTGACAAGGAAAAAGACCGACAATTTAAAAGTCTTGAGCTCATTGCTTCTGAGAATTTTACATCTAGAGCAGTGATGGAAGCAGTTGGTTCATGCCTCACAAACAAATATTCAGAAGGATTGCCAGGTAAAAGGTACTATGGTGGCAATGAGTACATTGATGAACTTGAAACCCTATGCCAACAAAGGGCACTGGCTGCATTTCATATAGATGGAAATAAATGGGGTGTTAATGTTCAAACTTTATCTGGTTCCCCTGCTAATTTTGCAGTATACACTGCAATTCTTAAACCACATGATCGCATAATGGGTTTGGACTTGCCTCATGGAGGACATTTGTCTCATGGATTCATGACGCCTAAAAAACGTGTATCAGCCACATCAATTTATTTTGAATCTATGCCTTATAGACTTGATGAATCAACAGGTCTTATTGATTATGATATGCTGGAGAAAACTGCTACTCTCTTCCGACCAAAACTTATTATTGCTGGTGCTAGTGCTTATCCACGGGACATTGACTACTCTAGGATGAGAAAAATTGCAGATGAAGTAGGTGCTTTTCTTATGATGGATATGGCTCATATAAGTGGGCTTGTTGCTGCATCTGTACTTTCTAATCCTTTTGAGTATTGTGATATTGTGACCACCACTACCCACAAGTCTTTAAGAGGTCCAAGAGGTGGTATGATATTCTTCAAGAAAGATTCTGTGCATGGGGTTGATCTGGAGTCTGCCATTAACAATGCTGTTTTTCCCGGTCTACAGGGGGGTCCTCATAACCACACAATTGGAGGACTAGCAGTTTGCTTGAAGTATGCCCAGTCTCCAGAATTTAAAAATTATCAAAATCAGGTGGTTGCTAACTGTAGAGCTCTTGCTAAGCGGTTAATTGGGCACGGATATAAACTGATTTCTGGTGGTAGTGACAATCACCTGGTTCTTGTTGATCTAAGGCCATCTGGTCTTGATGGTGCTCGGGTGGAGAAAATTCTGGACATGGCTTCAATAACACTCAACAAGAATTCAGTGCCTGGTGATAAGAGTGCACTAGTTCCGGGAGGCATACGCATTGGGGCACCTGCGATGACAACAAGAGGACTTGGCGAGAAAGAATTTGCACTAATTGCTGACTTCATTCATGAGGGTGTCCAAATAAGTCTTGAAGCCAGAAGTTTGGTCTCAGGACCAAAGCTCCAAGATTTTTTGAAGTTTGTATCATCTTCTGAATTTCCTTTGGGAGAGAAGGTTTCAGAGTTACGCGGGAAAGTTGAAGCTCTTACTACTCAGTATCCAATACCTGGAGCGGAATCAGTGATTACTATACAAACGCAGCTGTTTGCATCTCATAACACAGAACCGAGGAAGAAAGGAGAAAATACCCAAAAATCAACAATCACCGATGACCAAAACCAAAACCCTAGCAGGGTCGATAACGACGATGATCTCGAAGAGGGTGAGATCCTCGACGACGGCGATGACAGCAGCTCCACCACTTCGAAGCCTCCGGCCGCCCTCCCTCGCAACCCCCACCCTCTCGAGAATTCATGGACATTCTGGTTCGACAATCCTTCTGCCAAGTCCAAACAGGCCGCATGGGGCAGCTCCATCCGACCCATCTACACTTTCGCCACCGTCGAAGAGTTTTGGAGCATTTACAATAACATTCACCATCCGAGCAAGTTGGGTATTGGAGCAGACTTTCACTGCTTCAAGTATAAGATTGAGCCGAAATGGGAGGACCCTATCTGTGCTAATGGGGGCAAATGGACTATGACTTTTACAAAGGGAAAATCTGATACCAGTTGGTTGTATACGTTATTGGCGATGATTGGGGAGCAATTTGATCACGGAGATGAAATTTGTGGAGCTGTTGTGAATGTCAGAGCTAGGCAGGATAAAATTGCTCTTTGGACTAAGAATGCTGCGAATGAAGCTGCTCAGGAGGATGCAAAGAAGCATGAAAGGGGTGCAAAAAATAAGTACGTCATATGAAGCGTATAGCGTTTTTAACTGGGTAGCAAATGAAGGATGTGGCATTTTCCTCCTACATGTAGTTGTGAGCTGAATTCTAAGCCCTTTTAGTCTCTCGTCTGTGTAGTACTTTCATATTTGTTGTTTACGGAGAATATTTCATACTCTTGAGATGTTTCATCAATAATATAGTGATTTAGCTAATTTTGTTTCTATCATCGGAATGCAAATGGAAAAAAAGCTTACCCCA 2698 0.4351 KVRGAGSSVSVIAASIWYRPSQCKANGATPRTSAPPSAATAANGAPSPCKTLRFCYCILSKLLIFYYIQTCTRMSSLQQQPIWNKGMNFPAKGYGSNNAFLHQVRFCNMKPCKTSHLEGSLVTGKPSSLSFSVPEIGGDGSSFLDYGLSEADPEVRVIIDKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQQRALAAFHIDGNKWGVNVQTLSGSPANFAVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKKRVSATSIYFESMPYRLDESTGLIDYDMLEKTATLFRPKLIIAGASAYPRDIDYSRMRKIADEVGAFLMMDMAHISGLVAASVLSNPFEYCDIVTTTTHKSLRGPRGGMIFFKKDSVHGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKYAQSPEFKNYQNQVVANCRALAKRLIGHGYKLISGGSDNHLVLVDLRPSGLDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGAPAMTTRGLGEKEFALIADFIHEGVQISLEARSLVSGPKLQDFLKFVSSSEFPLGEKVSELRGKVEALTTQYPIPGAESVITIQTQLFASHNTEPRKKGENTQKSTITDDQNQNPSRVDNDDDLEEGEILDDGDDSSSTTSKPPAALPRNPHPLENSWTFWFDNPSAKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLGIGADFHCFKYKIEPKWEDPICANGGKWTMTFTKGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQDKIALWTKNAANEAAQEDAKKHERGAKNKYVI 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02268 822 FunFam Serine hydroxymethyltransferase 177 442 - -
Pste2g02268 822 Pfam Eukaryotic initiation factor 4E 670 810 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pste2g02268 822 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 146 595 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Pste2g02268 822 SUPERFAMILY PLP-dependent transferases 148 593 IPR015424 -
Pste2g02268 822 Gene3D RNA Cap, Translation Initiation Factor Eif4e 662 820 IPR023398 -
Pste2g02268 822 CDD SHMT 150 544 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Pste2g02268 822 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 371 387 IPR019798 GO:0030170
Pste2g02268 822 Gene3D Aspartate Aminotransferase, domain 1 152 592 IPR015422 GO:0003824
Pste2g02268 822 FunFam Eukaryotic translation initiation factor 4E 661 819 - -
Pste2g02268 822 ProSitePatterns Eukaryotic initiation factor 4E signature. 725 748 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Pste2g02268 822 Hamap Serine hydroxymethyltransferase [glyA]. 147 593 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Pste2g02268 822 Pfam Serine hydroxymethyltransferase 148 538 IPR039429 -
Pste2g02268 822 MobiDBLite consensus disorder prediction 607 669 - -
Pste2g02268 822 SUPERFAMILY eIF4e-like 665 806 IPR023398 -
Pste2g02268 822 Gene3D - 177 442 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02268 Pste-Chr2 22851522 22859088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02268 649 821 Eukaryotic Initiation Factors Gene Family AT4G18040 63.590 9.96e-83 263