Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste2g02268 | AAGGTCCGTGGAGCTGGAAGCAGTGTTAGTGTTATTGCAGCCTCCATCTGGTATCGTCCCAGTCAGTGTAAAGCCAACGGCGCGACGCCGCGAACCTCTGCTCCGCCGTCAGCTGCGACTGCTGCAAACGGCGCGCCTTCTCCCTGCAAAACACTGCGTTTTTGTTATTGTATTCTTTCAAAGCTTCTGATTTTCTATTACATACAGACGTGTACAAGGATGAGTTCTTTGCAGCAACAACCTATTTGGAACAAGGGGATGAATTTCCCTGCAAAAGGGTATGGCAGCAACAACGCGTTTCTACATCAAGTCAGGTTCTGTAATATGAAGCCATGCAAAACTTCTCATCTTGAAGGAAGTTTAGTCACTGGGAAGCCATCATCTCTATCTTTCTCTGTGCCTGAAATTGGAGGCGATGGAAGTAGCTTCCTGGACTATGGCTTGAGTGAAGCTGATCCAGAGGTTCGAGTAATTATTGACAAGGAAAAAGACCGACAATTTAAAAGTCTTGAGCTCATTGCTTCTGAGAATTTTACATCTAGAGCAGTGATGGAAGCAGTTGGTTCATGCCTCACAAACAAATATTCAGAAGGATTGCCAGGTAAAAGGTACTATGGTGGCAATGAGTACATTGATGAACTTGAAACCCTATGCCAACAAAGGGCACTGGCTGCATTTCATATAGATGGAAATAAATGGGGTGTTAATGTTCAAACTTTATCTGGTTCCCCTGCTAATTTTGCAGTATACACTGCAATTCTTAAACCACATGATCGCATAATGGGTTTGGACTTGCCTCATGGAGGACATTTGTCTCATGGATTCATGACGCCTAAAAAACGTGTATCAGCCACATCAATTTATTTTGAATCTATGCCTTATAGACTTGATGAATCAACAGGTCTTATTGATTATGATATGCTGGAGAAAACTGCTACTCTCTTCCGACCAAAACTTATTATTGCTGGTGCTAGTGCTTATCCACGGGACATTGACTACTCTAGGATGAGAAAAATTGCAGATGAAGTAGGTGCTTTTCTTATGATGGATATGGCTCATATAAGTGGGCTTGTTGCTGCATCTGTACTTTCTAATCCTTTTGAGTATTGTGATATTGTGACCACCACTACCCACAAGTCTTTAAGAGGTCCAAGAGGTGGTATGATATTCTTCAAGAAAGATTCTGTGCATGGGGTTGATCTGGAGTCTGCCATTAACAATGCTGTTTTTCCCGGTCTACAGGGGGGTCCTCATAACCACACAATTGGAGGACTAGCAGTTTGCTTGAAGTATGCCCAGTCTCCAGAATTTAAAAATTATCAAAATCAGGTGGTTGCTAACTGTAGAGCTCTTGCTAAGCGGTTAATTGGGCACGGATATAAACTGATTTCTGGTGGTAGTGACAATCACCTGGTTCTTGTTGATCTAAGGCCATCTGGTCTTGATGGTGCTCGGGTGGAGAAAATTCTGGACATGGCTTCAATAACACTCAACAAGAATTCAGTGCCTGGTGATAAGAGTGCACTAGTTCCGGGAGGCATACGCATTGGGGCACCTGCGATGACAACAAGAGGACTTGGCGAGAAAGAATTTGCACTAATTGCTGACTTCATTCATGAGGGTGTCCAAATAAGTCTTGAAGCCAGAAGTTTGGTCTCAGGACCAAAGCTCCAAGATTTTTTGAAGTTTGTATCATCTTCTGAATTTCCTTTGGGAGAGAAGGTTTCAGAGTTACGCGGGAAAGTTGAAGCTCTTACTACTCAGTATCCAATACCTGGAGCGGAATCAGTGATTACTATACAAACGCAGCTGTTTGCATCTCATAACACAGAACCGAGGAAGAAAGGAGAAAATACCCAAAAATCAACAATCACCGATGACCAAAACCAAAACCCTAGCAGGGTCGATAACGACGATGATCTCGAAGAGGGTGAGATCCTCGACGACGGCGATGACAGCAGCTCCACCACTTCGAAGCCTCCGGCCGCCCTCCCTCGCAACCCCCACCCTCTCGAGAATTCATGGACATTCTGGTTCGACAATCCTTCTGCCAAGTCCAAACAGGCCGCATGGGGCAGCTCCATCCGACCCATCTACACTTTCGCCACCGTCGAAGAGTTTTGGAGCATTTACAATAACATTCACCATCCGAGCAAGTTGGGTATTGGAGCAGACTTTCACTGCTTCAAGTATAAGATTGAGCCGAAATGGGAGGACCCTATCTGTGCTAATGGGGGCAAATGGACTATGACTTTTACAAAGGGAAAATCTGATACCAGTTGGTTGTATACGTTATTGGCGATGATTGGGGAGCAATTTGATCACGGAGATGAAATTTGTGGAGCTGTTGTGAATGTCAGAGCTAGGCAGGATAAAATTGCTCTTTGGACTAAGAATGCTGCGAATGAAGCTGCTCAGGAGGATGCAAAGAAGCATGAAAGGGGTGCAAAAAATAAGTACGTCATATGAAGCGTATAGCGTTTTTAACTGGGTAGCAAATGAAGGATGTGGCATTTTCCTCCTACATGTAGTTGTGAGCTGAATTCTAAGCCCTTTTAGTCTCTCGTCTGTGTAGTACTTTCATATTTGTTGTTTACGGAGAATATTTCATACTCTTGAGATGTTTCATCAATAATATAGTGATTTAGCTAATTTTGTTTCTATCATCGGAATGCAAATGGAAAAAAAGCTTACCCCA | 2698 | 0.4351 | KVRGAGSSVSVIAASIWYRPSQCKANGATPRTSAPPSAATAANGAPSPCKTLRFCYCILSKLLIFYYIQTCTRMSSLQQQPIWNKGMNFPAKGYGSNNAFLHQVRFCNMKPCKTSHLEGSLVTGKPSSLSFSVPEIGGDGSSFLDYGLSEADPEVRVIIDKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQQRALAAFHIDGNKWGVNVQTLSGSPANFAVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKKRVSATSIYFESMPYRLDESTGLIDYDMLEKTATLFRPKLIIAGASAYPRDIDYSRMRKIADEVGAFLMMDMAHISGLVAASVLSNPFEYCDIVTTTTHKSLRGPRGGMIFFKKDSVHGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKYAQSPEFKNYQNQVVANCRALAKRLIGHGYKLISGGSDNHLVLVDLRPSGLDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGAPAMTTRGLGEKEFALIADFIHEGVQISLEARSLVSGPKLQDFLKFVSSSEFPLGEKVSELRGKVEALTTQYPIPGAESVITIQTQLFASHNTEPRKKGENTQKSTITDDQNQNPSRVDNDDDLEEGEILDDGDDSSSTTSKPPAALPRNPHPLENSWTFWFDNPSAKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLGIGADFHCFKYKIEPKWEDPICANGGKWTMTFTKGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQDKIALWTKNAANEAAQEDAKKHERGAKNKYVI | 822 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste2g02268 | 822 | FunFam | Serine hydroxymethyltransferase | 177 | 442 | - | - | |
Pste2g02268 | 822 | Pfam | Eukaryotic initiation factor 4E | 670 | 810 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Pste2g02268 | 822 | PANTHER | SERINE HYDROXYMETHYLTRANSFERASE | 146 | 595 | IPR001085 | GO:0004372|GO:0019264|GO:0030170|GO:0035999 | |
Pste2g02268 | 822 | SUPERFAMILY | PLP-dependent transferases | 148 | 593 | IPR015424 | - | |
Pste2g02268 | 822 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 662 | 820 | IPR023398 | - | |
Pste2g02268 | 822 | CDD | SHMT | 150 | 544 | IPR001085 | GO:0004372|GO:0019264|GO:0030170|GO:0035999 | |
Pste2g02268 | 822 | ProSitePatterns | Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. | 371 | 387 | IPR019798 | GO:0030170 | |
Pste2g02268 | 822 | Gene3D | Aspartate Aminotransferase, domain 1 | 152 | 592 | IPR015422 | GO:0003824 | |
Pste2g02268 | 822 | FunFam | Eukaryotic translation initiation factor 4E | 661 | 819 | - | - | |
Pste2g02268 | 822 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 725 | 748 | IPR019770 | GO:0003723|GO:0003743|GO:0005737|GO:0006413 | |
Pste2g02268 | 822 | Hamap | Serine hydroxymethyltransferase [glyA]. | 147 | 593 | IPR001085 | GO:0004372|GO:0019264|GO:0030170|GO:0035999 | |
Pste2g02268 | 822 | Pfam | Serine hydroxymethyltransferase | 148 | 538 | IPR039429 | - | |
Pste2g02268 | 822 | MobiDBLite | consensus disorder prediction | 607 | 669 | - | - | |
Pste2g02268 | 822 | SUPERFAMILY | eIF4e-like | 665 | 806 | IPR023398 | - | |
Pste2g02268 | 822 | Gene3D | - | 177 | 442 | IPR015421 | GO:0003824 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste2g02268 | Pste-Chr2 | 22851522 | 22859088 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste2g02268 | 649 | 821 | Eukaryotic Initiation Factors Gene Family | AT4G18040 | 63.590 | 9.96e-83 | 263 |