Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02263 TCTCCCTCTTCTTCATGGGCCAGCACCACGCATATCATGCCTCAGCTTCGTACCCGACCACGCAGAAACCGCCTCGTAGATAACGCTAACGCGAATCGAATTACTCCACCGCCCTCGACGGCCGCCGGAGCCCGTCGGAAGAAGCCAACCGCTGCCGCCGCTACGACCGGGAGGAATCGCAGGCAGAACAACGCGATCGCCACCTTCGTTGAAATCGTGAACAACGACGCTGGTGCCGTTGCTGGAACCACCAGACTTAGGAAGTTGAAAGACGAGCAAGGAGAGAAAAAGGAGGTTTCCGCTAGGGTTTTGGAAAAGGAAGCCATGGATGAGTATGATAGTGGTGGCCGCAGCGCGGATAAGGCTCCCGGAGCCGACGACGAAGGCACCACCACTCCTCTCCCGGAGAAGGTTCAAGTTGGTGGTTCCCCACTGTACAGAATTGAGAGAAAACTTGGCAAGGGAGGATTTGGGCAGGTTTACGTTGGTCGTCGGTTAGGAGCTATGAATTCTAGTGAACGAACTGGTGCTGGTGCTGTTGAGGTAGCCTTAAAATTTGAACATAGAAGCAGCAAGGGGTGCAATTATGGACCTCCATATGAGTGGCAGGTCTACAATGCATTAGGCGGTAGTCATGGTGTTCCACGAGTTCATTTCAAGGGACGGCAAGGAGACTATTATATTATGGTCATGGATATGCTTGGCCCTAGTCTGTGGGATGTTTGGAGTAACAACTCACACACGATGTCTATTGAAATGGTTGCATGTATTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGACCCCCTGGAACTCCCGATGAAAAGAAGTTGTTTCTAGTTGATCTTGGATTAGCAACTCGATGGCGTGATAGTTCGACTGGCCTTCATGTTGATTATGATCAACGTCCAGATGTTTTTAGGGGCACAGTTCGCTATGCTAGTGTACATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTGGAATCTCTTGCTTACACTCTTGTTTTTCTTCTTCGTGGTCGGCTACCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACTTCTCCAGAAACTCTGTGTTGCTTTTGTCCTCAACCTTTCCGGCAGTTTGTTGACTATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCCCTTTTTGATGGAATTGTGGGCCCAAATCCAGACATCAGGCCAATAAACACTGAGGGTGCTCAGAAGCTTATATGTCAGGTTGGACATAAGAGGGGGAGGTTGACTATGGAAGATGATGATGATGAGCAACCAAAAAAGAAGGTTCGAATGGGAATGCCTGCTACACAATGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTATCATTATAATGTTGCTGATGTGCGACTTGCCCAACACATTGATAAAGGAAATGAAGATGGTTTATTTATCAGCAGTGTGGCTTCGTGTTCTAATCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCACCCTACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAGAAGAATTATTACATTAGTGCCATTGCTGGAGCTAATAATGGATCTTCGTTGGTTGTAATGTCTAAAGGTACCCAATACTTACAGCAATCCTATAAAGTCAGTGATTCATTTCCATTTAAGTGGATCAACAAAAAGTGGAGAGAAGGCTTTTATGTCACTGCTATGGCCACTGCTGGCTCTAGATGGGCAATTGTTATGTCTCGTGGGGCTGGTTTTTCAGATCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGTATTCATCGACGGTGGGATAGTGGTTATCGCATCACCTCAACTGCTGCAACATGGGACCAAGCTGCTTTTGTTCTTAGTGTTCCCAGAAGAAAACCAGCTGATGAAACTCAGGAGACCCTCCGCACATCTGCTTTTCCTAGTAATCATGTCAAGGAAAAATGGGCAAAGAACCTTTATATTGCATCTATTTGTTATGGGAGAACAGTGTCATAA 2142 0.4556 SPSSSWASTTHIMPQLRTRPRRNRLVDNANANRITPPPSTAAGARRKKPTAAAATTGRNRRQNNAIATFVEIVNNDAGAVAGTTRLRKLKDEQGEKKEVSARVLEKEAMDEYDSGGRSADKAPGADDEGTTTPLPEKVQVGGSPLYRIERKLGKGGFGQVYVGRRLGAMNSSERTGAGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYIMVMDMLGPSLWDVWSNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVDYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTMEDDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLAQHIDKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSPYFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSNHVKEKWAKNLYIASICYGRTVS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02263 713 Gene3D Transferase(Phosphotransferase) domain 1 118 467 - -
Pste2g02263 713 Pfam Protein kinase domain 146 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02263 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Pste2g02263 713 ProSitePatterns Protein kinases ATP-binding region signature. 152 185 IPR017441 GO:0005524
Pste2g02263 713 ProSiteProfiles Protein kinase domain profile. 146 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02263 713 SMART serkin_6 146 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02263 713 PANTHER CASEIN KINASE-RELATED 141 678 - -
Pste2g02263 713 CDD STKc_CK1 146 422 - -
Pste2g02263 713 FunFam casein kinase 1-like protein HD16 119 469 - -
Pste2g02263 713 MobiDBLite consensus disorder prediction 1 16 - -
Pste2g02263 713 MobiDBLite consensus disorder prediction 91 141 - -
Pste2g02263 713 MobiDBLite consensus disorder prediction 1 60 - -
Pste2g02263 713 MobiDBLite consensus disorder prediction 91 124 - -
Pste2g02263 713 SUPERFAMILY Protein kinase-like (PK-like) 146 426 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02263 Pste-Chr2 22841721 22846461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02263 265 422 MAP Kinase Kinase Kinase AT5G50180 26.875 2.50e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pste2g02263 Pkinase 2.5e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02263 2 22841721 22846461 Pste2g02263 2 22841721 22846461 ECH
Pste2g02263 2 22841721 22846461 Pste8g02112 8 18318088 18323618 PCT