Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02248 ATGGCCAAAGGATTTTCAACGTCTTCAAAGACAAAATCCATGAAATTTATATGCCTCTTCATGTTCATGCTCAATTTCCAGTTATCCCATGGAGTACAAGAGGTTGAGCTTCTGCTATCCTTCAAAGCTTCTCTCAACGATCCACTTCACTTTCTCTCCAACTGGGACACTTCCTCTGTCGCCATCTGCAAGTGGCATGGCATCACCTGTAACAACAACAACAACAACGTTAACTCTTCCCACGTTAACGCTGTGGTGGTCACAGGAAAAAACATAACCGGCGAGGTTTCCTCTTCCGTTTTTCAACTTCCACACATCACAAACCTCGACCTTTCCAATAATCAGTTTGTTGGGGAAATCAATTTTAACTACCCTATAAATTCTCTGTCTCAACTTCGTTACCTTAACCTCAGCAACAACAACCTCACGGGTTCTTTGCCTCAACCCTTGTTTTCGGTGCTTTTTCTGAACCTTGAAACTCTTGATCTCTCCAACAACATGTTTTCGGGGAGCATACCCTACCAAATTGGATTGCTTTCTAGCCTAAGGTATCTTGATCTCGGAGGAAATGTTTTGGTGGGAAAGATTCCAAATTCTATCACCAACATGACCAGTTTGCAATACCTTACGTTGGCTTCAAACCAGTTAGTAGATAAGATACCAGTAGAAATTGGCGTCATGAAGAGCTTGAAGTGGATTTACTTGGGCTACAACAACCTTTCAGGTGAGATACCAAGTGGCATTGGAGAGTTACTCTCTTTGAATCACCTCGATCTTGTTTACAACAACCTCAGTGGACCTATTCCTCAATCTCTCGGACACCTCACCGAGCTTCAATATCTCTTCCTCTACCAAAACAAGCTAAGCGGTCCAATTCCCCTATCCATTTTCGAACTGAAAAAGCTCATTTCACTGGATCTAAGTGATAACTCTCTTTCGGGTGAGATTTCTGATCGTGTGGCTCAGCTACAGGGCCTGGAGATTCTCCACCTTTTCTCAAACAACTTCACTGGGAATATTCCAAAGGCTGTTGCATCTATGGCTCGGCTTCAGGTTCTTCAGCTATGGTCAAACGGATTAACAGGTGAGATTCCTGAGGAACTAGGGAAGCATAGCAACCTCACGGTTTTGGACCTCTCCACCAACAAGCTCACAGGGAAGATTCCCAACCACATATGCGACCATGGTAGTCTTTTCAAGCTTATCCTCTTCTCCAACTCTTTAGAAGGAGAAATCCCAAAAAGCATAACCTCTTGCAGAAGCCTACGAAGAGTGAGACTCCAAAACAACAAGCTCTCGGGAAAACTACCATCCGAGTTGACCACCCTGCCTCAGGTATACTTCTTTGAAATCTCTGGCAACCAACTTTCTGGAAGGATCGATGACAGAAAATGGGATATGCCGTCGCTTCAAATGCTCAGTTTGGCTAACAACAACTTCTCAGGAGAAATCCCAAACTCTTTTGGGACTCAAATTCTGGAGGACTTAGACTTATCACATAACCAATTCTCAGGTTCTATTCCAATTGGTTTCAAAAGTTTGTCAGAACTCGTCGAATTGAAGCTCAGCAATAACAACCTCTTTGGTAAAATCCCAGAGGAAATATGCTCCTGCAAGAAGCTCGTTGCCTTAGACTTGAGTCACAACCAGCTCAGTGGTGAAATTCCGATTAAACTCTCCGAGATGCCGGTTCTCGGCCTCCTTGATCTGTCCGAAAACTTATTCTCCGGCGAGATTCCGCAGAATTTGGGAAGCGAGGAGTCTCTCGTTCAGGTAAACATATCACACAACCATTTCCACGGAAGTTTACCTTCCACCGGTGCTTTTCTTGCCATCAACGCGAGTGCAGTTACCGGCAACAACCTCTGTGACAGTGACGGTGACGGTGACGCCTCAAGCGGTTTGCCACCGTGCAAAAATAACAATCAGAACCCAAATTGGCTCTTCATTATGCTGTGTTTTCTACTAGCGTTGGTTGCGTTCGCAACAGCTTCTTTTCTGGTGTTTTACGTTCGTAGGAGAAAGAAGTTGGCGAGGGTGAGAAGAGTGGAAAACGAAGACGGAATGTGGGAAGTGGAGTTCTTTGATTCGAAAGCGTCGAGGTTGATCAATGTGGAGGACGTTTTGTCAGCGGTTAAAAAAGGAAAAGTTGTGTCCAAAGGAAGGAACTGGGTTTCGTACGAAGGTAAGTGCATGGAGAATGACATGCAGTTCGTGGTGAAGGAAATCAATGACTTGAATTCTCTTTCTATGAGTTTGTGGGAAGAGGTTGGGAAGATTCATCACCCCAATATCGTTAACCTTATTGGGATGTGTAGGTGTGGAAAGAGAGGGTACTTGGTGTACGAGCACGACGAGGGGAAGAAACTAAGCGAAATTGTCAACAGTTTGAGTTGGCAACACCGTTGCAAAATTGCTGTTGGCGTTGCAAAAGCGCTTAAGTTCTTGCATTCTCCTGCTTCATCCATGGTTTTGGTTGGAGAGGTGTCGCCGGAGATAGTTTGGGTTGACGGTAAAGGCGTCCCTCGCCTTAAGGTCACACCTCCAGTAGTGCCATGTTTGGATCTCAAGGGTTTCGTTTCTTCACCCTACGTTGTTCAAGAAACAAGAGAGAGGAAAAATGTGTCGGAGAAGAGTGAGATATATGGGTTCGGAGTGATGCTGATTGAATTACTGACGGGAAGGAGCGCCATGGACATAGAAGCTGGCAATGGCATGCACAAGACCATTGTAGAGTGGGCCCGTTATTGTTACTCAGACTGTCATCTTGACACGTGGATAGATCCTGTGATGAAGGGTGGAGATGCATTGAGCTATCAGAACGACATCGTTGAGATCATGAATCTAGCACTGCATTGTACCGCAACTGATCCCACTGCAAGGCCATGCGCAAGAGACGTACTCAAAGCCCTAGAGACTGTTCACAGAATCACTTTTTGTTGAGCTTTTTCACCACTCAACCTCAACTCTCTCATGAGCTTTCTCTGACCTATGCTTATAGTTTTTGTTCTCTCCTTTTTTCGCTTTTTTATTTTGAGTTTTCACTTTTTGCCCTTTCTTTAATCCATAATTTGTTTAAGGTTTTAGTTTAGCATAAGTAAGTTGTTGATCGAAGGATTGCTAGGGAAATGTTTGCTTGATATTTTACATAAGGGCATGCTTGACATACTGCTGATGAGTGTAAAAGTAAATGTAAATAAATTGAATGTGATTAATAATTAATTATGTGAGAGCAGGACAATATCTATGTAATTTGTATTTCTC 3264 0.4375 MAKGFSTSSKTKSMKFICLFMFMLNFQLSHGVQEVELLLSFKASLNDPLHFLSNWDTSSVAICKWHGITCNNNNNNVNSSHVNAVVVTGKNITGEVSSSVFQLPHITNLDLSNNQFVGEINFNYPINSLSQLRYLNLSNNNLTGSLPQPLFSVLFLNLETLDLSNNMFSGSIPYQIGLLSSLRYLDLGGNVLVGKIPNSITNMTSLQYLTLASNQLVDKIPVEIGVMKSLKWIYLGYNNLSGEIPSGIGELLSLNHLDLVYNNLSGPIPQSLGHLTELQYLFLYQNKLSGPIPLSIFELKKLISLDLSDNSLSGEISDRVAQLQGLEILHLFSNNFTGNIPKAVASMARLQVLQLWSNGLTGEIPEELGKHSNLTVLDLSTNKLTGKIPNHICDHGSLFKLILFSNSLEGEIPKSITSCRSLRRVRLQNNKLSGKLPSELTTLPQVYFFEISGNQLSGRIDDRKWDMPSLQMLSLANNNFSGEIPNSFGTQILEDLDLSHNQFSGSIPIGFKSLSELVELKLSNNNLFGKIPEEICSCKKLVALDLSHNQLSGEIPIKLSEMPVLGLLDLSENLFSGEIPQNLGSEESLVQVNISHNHFHGSLPSTGAFLAINASAVTGNNLCDSDGDGDASSGLPPCKNNNQNPNWLFIMLCFLLALVAFATASFLVFYVRRRKKLARVRRVENEDGMWEVEFFDSKASRLINVEDVLSAVKKGKVVSKGRNWVSYEGKCMENDMQFVVKEINDLNSLSMSLWEEVGKIHHPNIVNLIGMCRCGKRGYLVYEHDEGKKLSEIVNSLSWQHRCKIAVGVAKALKFLHSPASSMVLVGEVSPEIVWVDGKGVPRLKVTPPVVPCLDLKGFVSSPYVVQETRERKNVSEKSEIYGFGVMLIELLTGRSAMDIEAGNGMHKTIVEWARYCYSDCHLDTWIDPVMKGGDALSYQNDIVEIMNLALHCTATDPTARPCARDVLKALETVHRITFC 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02248 980 SUPERFAMILY L domain-like 345 604 - -
Pste2g02248 980 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 785 980 - -
Pste2g02248 980 Pfam Leucine rich repeat 229 288 IPR001611 GO:0005515
Pste2g02248 980 Pfam Leucine rich repeat 493 551 IPR001611 GO:0005515
Pste2g02248 980 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Pste2g02248 980 Pfam Leucine rich repeat 349 408 IPR001611 GO:0005515
Pste2g02248 980 ProSiteProfiles Leucine-rich repeat profile. 157 179 IPR001611 GO:0005515
Pste2g02248 980 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 397 972 - -
Pste2g02248 980 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 154 245 - -
Pste2g02248 980 Gene3D Ribonuclease Inhibitor 33 152 IPR032675 -
Pste2g02248 980 Gene3D Ribonuclease Inhibitor 246 346 IPR032675 -
Pste2g02248 980 Gene3D Ribonuclease Inhibitor 153 245 IPR032675 -
Pste2g02248 980 SMART LRR_typ_2 347 371 IPR003591 -
Pste2g02248 980 SMART LRR_typ_2 514 538 IPR003591 -
Pste2g02248 980 SMART LRR_typ_2 129 153 IPR003591 -
Pste2g02248 980 SMART LRR_typ_2 372 395 IPR003591 -
Pste2g02248 980 SMART LRR_typ_2 203 225 IPR003591 -
Pste2g02248 980 SMART LRR_typ_2 155 179 IPR003591 -
Pste2g02248 980 SMART LRR_typ_2 275 299 IPR003591 -
Pste2g02248 980 SMART LRR_typ_2 227 251 IPR003591 -
Pste2g02248 980 SMART LRR_typ_2 562 586 IPR003591 -
Pste2g02248 980 SMART LRR_typ_2 467 491 IPR003591 -
Pste2g02248 980 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 676 784 - -
Pste2g02248 980 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 33 153 - -
Pste2g02248 980 Gene3D Phosphorylase Kinase; domain 1 676 784 - -
Pste2g02248 980 SUPERFAMILY L domain-like 33 365 - -
Pste2g02248 980 ProSiteProfiles Protein kinase domain profile. 655 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02248 980 Gene3D Ribonuclease Inhibitor 347 627 IPR032675 -
Pste2g02248 980 Pfam Protein tyrosine and serine/threonine kinase 720 970 IPR001245 GO:0004672|GO:0006468
Pste2g02248 980 ProSiteProfiles Leucine-rich repeat profile. 131 153 IPR001611 GO:0005515
Pste2g02248 980 SUPERFAMILY Protein kinase-like (PK-like) 713 975 IPR011009 -
Pste2g02248 980 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 331 634 - -
Pste2g02248 980 FunFam Leucine-rich repeat receptor protein kinase EMS1 246 330 - -
Pste2g02248 980 Gene3D Transferase(Phosphotransferase) domain 1 785 978 - -
Pste2g02248 980 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Pste2g02248 980 Pfam Leucine Rich Repeat 131 149 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02248 Pste-Chr2 22599811 22603250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02248 19 972 Receptor kinase-like Gene Family AT2G25790 51.349 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Pste2g02248 PK_Tyr_Ser-Thr 9.8e-13 CL0016