Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02234 ATGCCTGTGAAATCAGAGCTTAGAGGTACAGAGAGAAAGAGATGGGATCCAGTGGTCATCATACAAGAGGATGATGCAAACCAGGGTGATCTTTCCTACAACAACTTTACTTGGCAAGATGATGAGCAGCCTGCTTGTCAGGACGACATTAGGAACTTGAATCTGAATTTGTTCAGAAGCTCGGTTAAGGAGAATGAGTTACAGGAGTATGTTCCATGCTACAACAATTTCAGCTGCCCAAGCTATTCAACTTGTTTACATGTTAACTGTGGCGGGAAGGATGTAAATGTAAAAGATGATAAAGGAGAAAACCTTTATATGGGAGACGTAGATGTTCAGGGTGGCTCTGCAACTTATTTCTACAGTTCCAATTATCACTGGGGATTTAGTAGCACTGGAGACTTTATGGATGATTTCGAGGCACAGAACATACGTTACTCTGTATCACTTCCATCTTCAAATATGCCTGAATTATACAAGTCAGCTCGTTTATCTCCAATTACACTTACTTATTTCCACAATTGCATGGAAAATGGGAACTATACTGTAAACCTTCACTTTGCTGAGATACAGTTTACAAATGATAAAACATATAGAAGTCTTGGGAAGCGCACATTTGATGTCTATGTTCAGGGAAAACTGATTAGAAAAAATTTTAATATAGAGAATGAGACCAATGCTGCTGAAAAACCACTAGTACTGCCTCTTTACAATATCAGTATTACAAATAATGTCTTAGAGATTCGGTTCTACTGGGCTGGAAAAGGAACAACTAGAATTCCCGATGTTGGAGTTTATGGTCCCCTTGTATCAGCTTTTTCTGTGGTTTCAAATTCCAAAGTTTGCTCAAATAGAGAAAAGAAAGTTGCCGTTTCTTTAATCATTGCAATTGTAGCTGGAACTCTATGCGTAGCGCTATTGATATCTGGATTCGTTTGGTGGAAATGGAAAGGCTTTTTCAGAGGGAAATTGCGAAGGAAAGAACTTGGACAACTACTGCTTAAAACAAATATCTTTTGGCTTACATGGACAGGTACAGAAGATAGAGATACTCAGACTGGCAACTTTAGCTTGGAGCAGATCAGAGTTGCCACTAATGACTTCTCTTCTGCTAATAAGATCGGGGAAGGTGGTTTTGGTCCTGTATACAAGGGTGAATTGCTAGATGGTACATTTATAGCGGTCAAGCAACTGGCATCAAAATCACGGCAGGGAAATCGTGAATTTATAAATGAAATAGGCCTGATATCTTGTGTCCAACACCCCAACCTTGTAAAGCTTCATGGATATTGTACTGAAGGGGAACAACTTTTGCTGGTATACGAGTATCTGGAAAATAACAGCCTCGCCCGAGCTTTATTTGGTAGTCAAAACAATCGGCTTAAATTGGACTGGCCCACAAGGTTTAGGATTTGCATTGGCATAGCGAAAGGTTTGGCATTTCTGCATGATGAATCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGTAAATTGAATCCGAAGATATCCGACTTTGGCTTGGCTAAGCTTGATGAGGATGAGAAGACCCATATCAGCACCCGAGTTGCTGGGACTATAGGATATATGGCACCAGAATATGCATTATGGGGCTATCTTACAGACAAGGCTGATGTTTACAGTTTTGGAATTGTGGCATTAGAAATTGTTAGTGGGAAAAGCAATAACAATTATTTACCAGACGATGGAAGTGTTTGTCTTTTGGATTGGGCATGTCAGTTAAACCAAGCTCGAAGTTTGGTGGGGCTGATTGATGAAAGGTTGGGACCAGACCTTAATAAAGCGGAAGCAGAGAAGGTGGTCAAAATAGCTCTCTTGTGCACAAGTGCTTCTCCATCAATTAGGCCTACAATGTCTGAGGTAGTGAATATGCTTGAAGGAGAAGCAGATATTCCTGATGCAATCCCAGAACCAAGTACCTACAATGACGATTTAAGGTTTAAAGCCTTAAGAGACCTCCATGAATATCGGTCAAAGCAGAGTTCAAGTGGAAACCAGAGCCAGAGTTCAACGACACATACATTCAGCTCACCATCTGGTGGTAATCAATACTCACACTACGAGTTATCTTGAGGATCATAGTTCAGTACACAATAGTTAGTTTTCCCCTTTCAACATCTTGGAGACACAATTCACCATATAGCAGTGGTAGCTCCAGATCTTAGGTGTTGAAAAGTTTGACCATGAACAACCATACTAATCAAAAGTGCACTTCACACACATGCATGAAACCTTCTATTTCCACTTGTGTAGTTTTCTGCTTTCTGCAGTGGTCTCTACAATGGAGTATCAGAAGATTTTTCTTTTCTTCGTTATCTCACCTTTTTTCGGCCTTTGTTTTTCTGTATAAATATATTGC 2401 0.3994 MPVKSELRGTERKRWDPVVIIQEDDANQGDLSYNNFTWQDDEQPACQDDIRNLNLNLFRSSVKENELQEYVPCYNNFSCPSYSTCLHVNCGGKDVNVKDDKGENLYMGDVDVQGGSATYFYSSNYHWGFSSTGDFMDDFEAQNIRYSVSLPSSNMPELYKSARLSPITLTYFHNCMENGNYTVNLHFAEIQFTNDKTYRSLGKRTFDVYVQGKLIRKNFNIENETNAAEKPLVLPLYNISITNNVLEIRFYWAGKGTTRIPDVGVYGPLVSAFSVVSNSKVCSNREKKVAVSLIIAIVAGTLCVALLISGFVWWKWKGFFRGKLRRKELGQLLLKTNIFWLTWTGTEDRDTQTGNFSLEQIRVATNDFSSANKIGEGGFGPVYKGELLDGTFIAVKQLASKSRQGNREFINEIGLISCVQHPNLVKLHGYCTEGEQLLLVYEYLENNSLARALFGSQNNRLKLDWPTRFRICIGIAKGLAFLHDESRFKIVHRDIKASNVLLDGKLNPKISDFGLAKLDEDEKTHISTRVAGTIGYMAPEYALWGYLTDKADVYSFGIVALEIVSGKSNNNYLPDDGSVCLLDWACQLNQARSLVGLIDERLGPDLNKAEAEKVVKIALLCTSASPSIRPTMSEVVNMLEGEADIPDAIPEPSTYNDDLRFKALRDLHEYRSKQSSSGNQSQSSTTHTFSSPSGGNQYSHYELS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02234 704 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 341 443 - -
Pste2g02234 704 FunFam Putative LRR receptor-like serine/threonine-protein kinase 444 651 - -
Pste2g02234 704 SMART serkin_6 368 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02234 704 MobiDBLite consensus disorder prediction 670 704 - -
Pste2g02234 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Pste2g02234 704 Gene3D Phosphorylase Kinase; domain 1 342 443 - -
Pste2g02234 704 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 676 - -
Pste2g02234 704 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 83 278 - -
Pste2g02234 704 Pfam Protein tyrosine and serine/threonine kinase 371 639 IPR001245 GO:0004672|GO:0006468
Pste2g02234 704 CDD STKc_IRAK 374 641 - -
Pste2g02234 704 Pfam Malectin domain 85 273 IPR021720 -
Pste2g02234 704 MobiDBLite consensus disorder prediction 673 704 - -
Pste2g02234 704 Gene3D Transferase(Phosphotransferase) domain 1 444 647 - -
Pste2g02234 704 Gene3D - 81 280 - -
Pste2g02234 704 SUPERFAMILY Protein kinase-like (PK-like) 353 640 IPR011009 -
Pste2g02234 704 ProSiteProfiles Protein kinase domain profile. 368 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02234 Pste-Chr2 22399554 22405362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02234 30 662 Receptor kinase-like Gene Family AT1G29740 51.698 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste2g02234 PK_Tyr_Ser-Thr 4.9e-47 CL0016