Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02217 TTCCATTTTCTCTGGAAAAATCAAATCATTAATACTGTTGAAAAACATTGTCAGAATTTGAGCTTTTGGCTACTATGAACAGAGATACGAACTTGCCATTTTTGGAGCAGAAGCAATCTTTTTTGTGTCATGCTGCTTTCATTTTCAGCCTCGTTTTTGTGTCTGAGCATTGAAATCTGGACAAAGGTTTCACCTTTGGGTGTGTGATTCATCGCCAGCTGTAACTGGGTGAGTGAAGATAAGGTTCGGAGGATTAATTTTCTAAGGAGGGTCTGTGAATTGAATTGGTAGGGTGTCCCTTTTGTTTTTTTGTTGAGAATTATTAATTGGCGTTAACTGGGATTGATGAAACCTAGCTAGAAAGGAAAAGGGGGGAGAACAAGGAGGTTATGTGTATTATTTGTAGTGGTTAAATTTGTAAAAAGGTGTGGGGATTTTTGTTTATTGGAATACTAAGGGTTTTGAAAGTTAAAGATTTGTGTTTTGGATGATGGAGGAAGCTCAGGGCAGTTGTAGTTCCCTGCCACCTTTCCTCAGCAAGACTTATGAGATGGTGGATGATCCTTCCACTAATTCCGTTGTTTCCTGGAGTGCCACCAATAAGAGTTTCATTGTTTGGAACCCACCAGAATTTTCAAGGGATTTGTTACCCAGATTCTTTAAGCACAATAACTTCTCCAGTTTTATCAGGCAGCTCAACACTTATGGGTTTAGAAAGATTGATCCTGAACAATGGGAATTTGCAAATGACGATTTTATAAGAGGTCAACCACACCTTCTGAAGAATATCCATAGGCGCAAACCTGTCCATAGCCATTCTTTGCAGAATGTCCAGGGTCAAGGGGCTTCTCCACTGACTGAATCAGAACGTCAGAGTTTTAAGGATGAGATACAGAAGCTTCAACATGAAAAAGAGCAACTTCTTCGGGAGTTAGAGAGGCATGAACAGGAGTGGAAATTTTATGAGGCACAATTACAACACTCTAATGATCGTTTGGAAAAGTTGGAAAAGAAGCAAGAAAATTTGGTTTCTTCTGTTTCTCAAGTGTTGCAGAAACCTGGGATTGCCTTAAATCTCTTGCCGCTGACAGAAAACATGGAGAGAAAACGGAGGTTACCGAGAAGTGGTCTCTTTAGTGATGATGCTAGCATTGAAGATCATATGGAAACTTCCCCAGTATTACCTGTGGAAAATGCAGAGGGTGCCTCTATTTTCACAGCAAACATGGAGCGATTGGATCTAATCGAGTCATCCATGATGTTTTGGGAGAGTATTACACATGAGGTTGGTGACGTCCTTGTTCAAAGTCATTTAAACTTGGATTTTGACGAATCTACAAGTTGTGCAGATAGTCCTGCTATCTCTTGTGTGCAGCTAGAAGTTGAAGCTCAGCCTAAGTCACCTGGAATAAATGTGAATTCTGAGCCAGCTGTAGCTGCTGTTCCTGATCTTGATGCATCAAAAGAACAACCTGCAGGAACAGCCCCTGTGACTACCGGTGTTAATGACATATTCTGGGAACGATTCTTGACAGAGAATCCTGGTTCATCTGAAATGCAGGAAGCACAATCTGAAAGAAAGGATTCTGATGGAAGAATTAATGCCAAATTTTGGTGGAACATTAGGAATGTAAATAACCCTCCAGAACAGATGGGGCATTCTTAGTCAAGCAGAACAAACTTAGTTGCAATCGATTATTCCTTCTAGCTTGTGATGCCCCTCAATTTTCATGTAATAAATTTAGGTATGAATGGTTGGCTCTGCTATATACACATATATGCCATATTTTTTGTTAATGATTGC 1804 0.4002 MMEEAQGSCSSLPPFLSKTYEMVDDPSTNSVVSWSATNKSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQWEFANDDFIRGQPHLLKNIHRRKPVHSHSLQNVQGQGASPLTESERQSFKDEIQKLQHEKEQLLRELERHEQEWKFYEAQLQHSNDRLEKLEKKQENLVSSVSQVLQKPGIALNLLPLTENMERKRRLPRSGLFSDDASIEDHMETSPVLPVENAEGASIFTANMERLDLIESSMMFWESITHEVGDVLVQSHLNLDFDESTSCADSPAISCVQLEVEAQPKSPGINVNSEPAVAAVPDLDASKEQPAGTAPVTTGVNDIFWERFLTENPGSSEMQEAQSERKDSDGRINAKFWWNIRNVNNPPEQMGHS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02217 392 FunFam Heat shock transcription factor 1 8 105 - -
Pste2g02217 392 SUPERFAMILY "Winged helix" DNA-binding domain 10 104 IPR036390 -
Pste2g02217 392 SMART hsfneu3 11 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g02217 392 Pfam HSF-type DNA-binding 15 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g02217 392 ProSitePatterns HSF-type DNA-binding domain signature. 54 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g02217 392 PRINTS Heat shock factor (HSF) domain signature 53 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g02217 392 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g02217 392 PRINTS Heat shock factor (HSF) domain signature 15 38 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste2g02217 392 Coils Coil 128 190 - -
Pste2g02217 392 Gene3D - 8 105 IPR036388 -
Pste2g02217 392 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 219 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02217 Pste-Chr2 22213692 22215612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02217 8 391 HSF AT4G18880 54.156 1.41e-127 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste2g02217 HSF_DNA-bind 5.7e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02217 2 22213692 22215612 Pste2g02217 2 22213692 22215612 ECH
Pste2g02217 2 22213692 22215612 Pste3g03072 3 23502565 23504973 ECH
Pste3g03072 3 23502565 23504973 Pste2g02217 2 22213692 22215612 PCT