Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02211 ATGACTAGGGCTGTCCGCAGTAGGGTACTAAAAGATGCCAATGGTGATATTAGTGATCATCTACGCAACCACATCCATTTGACAAATTGTATTCACCTGAAGAACCATATGCACAAGAACAGCCCGATACTGGCTGATAGGTCAATCATGAGGGACCTAGTTGTGCTGCAGAGATCACGGTCTCTCAGAGATCCTTCTGCGAGCCCTCCATCATGGCAATCGCCTTCTGTAGTTGACTTGCTTTTCAAAAGAGTTGACAATGATGCCGCGTCTCTGGGGGGGAGAAGGTCTGTAGGTGTTGAGCGAAGGAAAGAAGGGAGAAGATTGTCTGGAACTTCACCACCCTTGGTGAGCATTGGTTCATCAAGGGTTGCTCCGGGTGAGATTGGTAGGGCTAATGATGGGGTAACAGCTCCTAGTGAACGTAGTAGCAGGAGTGGATTGGGAGATGCAAGGAGAGTTGGAAGAGAAGAATCTGGTAGGAAGAATGACAGGCCTGACTTTTTGGATGTTAATCAAGTGGAGCCTCTCAATCAAGCTGGTAAAAGCTTGGCTGAAGATGTTATTTCTAGGCACTCGGAGTCCAAAGATAGAAAGAGCAAACAGAGGGGGAAGAATGTTCGAGATGTTCAACTTAAGACCCTTTCCGAGCAGCTGAATGATGTTCCATTGGATAGTGATGATTTAGCATCATCAAACATTCATTTTCGTGGAAGGTTTCCTAGACAGGAGAAAATTATTGAGGAGGCAGAACCCCGGATGCGCAGTCATGGAAGTGGAATGAATAGGGGGAAAAGGCGTAAGTTTCGAAGTGCTCGAAGAACTCGGGTCGCTACAACATCAAGAGATATTGGAGCTGAGAATGAGCTGTCTGTGGCTTCCAACACATTAGCTCAGGCTTCATCTCACCAGAAGTATCAATTGGAGGAGGCTGATGAGTTTGCAGATGAAAATGTTACCAGGGCTCCAAAAAATGGGTGTGGCATTCCTTGGAATTGGTCCAGAATTCATCATAGGGGTAAAACATTCCTTGATATGGCTGGAAGAAGTTTCTCTTGTGGTTTATCTGACTCAAGGTTGAAGAAGGGGCCATTTGCTGCCAATGGGAGAAATATTTCTGAGATGCCTGTGGCATCTGAGCACTCAAGCTCATGTACCAAGTCTGATGCAGAGGCACTGCCTTTACTAGTTGAGGCATCTGGATCTCATGCAAGCACTGAAAATGCTTGTTGGGATCATGACTATTCTGGGGAACTAGGTCTTTTTGGTGATAATTTATTCAAGCATGATGTTGATTCTGACCTCGCTTCTGAAGCTAGATCTGGTGATCAGCGTAAGTTGAGAGGGAATCGTCACTGTAGACACCAAAGTTTAACACAAAAGTATATGCCTCGAACCTTCAGAGATATGGTTGGGCAGCATTTAGTGGCCCAAGCTCTTTCAAACGCAGTAATGAAAAGGAAAGTTGGATTGTTGTATGTGTTTTATGGTCCCCATGGCACTGGAAAAACTTCCTGTGCTCGCATATTTGCCAGAGCTCTGAATTGTAATTCTTCAGAACACCCGAAACCTTGTGGCTTTTGCAATTATTGCATAGCACATGATATGGGCAAGAGTAGAAATATAAGGGAGGTAGGTCCGGTCAGTAATTTTGACTTTGAGAGCATTATGGACCTACTTGATAATATGATCGTTTCCCAGCTTCCATCACATTACAGAGTGTTTATTTTTGATGACTGTGATACTCTGTCAACAGATTGTTGGAATGCTATATCAAAGGTCATTGATCGAGCACCTAGACGTGTGGTTTTTATCCTTGTCAGTTCTAGTCTTGATGTCTTGCCTCATATAATAATATCCAGGTGTCAAAAATTCTTTTTTCCAAAGCTAAAGGATGCAGATATTATATATACACTGCAGTCGGTTGCAACCAAAGAAGGTCTAGAAATTGATAAGGATGCCCTGAAACTCATTGCATCAAGGTCAGACGGATCATTGAGGGATGCTGAAATGACCCTTGAACAACTTAGTTTGCTTGGGCAGAGAATATCAGTTCCCCTTGTTCAAGAATTGGTAGGGCTAATCTCTGATGAGAAATTGGTGGATCTGCTTGATTTGGCATTATCTGCTGACACAGTTAACACTGTGAAGAATTTGAGAGTGATCATGGAAACTGGTGTCGAACCATTGGCTTTAATGTCACAACTTGCTACAGTAATTACTGATATACTTGCCGGGACCTATGATTTCACAAAAGAAAGGCGGAGAAGAAAGTTCTTCCGGAGACAACCATTGTCCAAAGAAGACATGGAAAAGCTGCGCCAAGCTCTGAAAACTTTATCTGAGGCTGAGAAGCAGTTGAGGATGTCAAATGATAAGTTAACATGGTTGACAGCTGCCTTACTTCAGCTTGCTCCGGATCAGCAATATGTGTTGCCAACTTCATCTGATAACAGTTTCAACCATAGTCCCTTTGCTCTAAAAGATACAGATGCAAGAGAAGCAGCTAGACTGACTGCCAATCCTGTTGACATTCCTAACAAAGCCAGGCGATTATCAATGGATGCTAGAATTGAAAATTTCCATGCTGGAAGCTCAGCAGATGGTATGACAAAGGGTGTTGGTTCTGAGAAAAAACGACATAGTGTGTCTGGATTTACTCCTCAACATGTTCATTCACAAGCCACTGATAAGACTAGGATGGATGAGAGGCATATTTTGGGAAATCACCGTAAAGAAATTGAAGAGATATGGCTAGAGGTGCTTGAGAGGATACAAGTTACTTGGCTAAAAGAGTTTCTGTTTAAAGAAGGCAAGTTGATCTCTATTAGTTTTGGGGCAGCTCCAACTGTGCAGCTAATATTGAGTTCTCAACTTACCAAATCTACTGCCGAGAAGTTCAGAGGGCATATCTTACAAGCATTTGAATCTGTCCTTGGATCTTCTATTACAATAGAAATTAGATGTGAGTCAAATAAAGATGCAGGCTTGGCTGTTCAACAGCAGCTTACATTGCCTACTACCAATGATAGTTTGTCTCAGATTAGAGACTTTAATGGTGTCAGCACTGTAGCTCATCCTTCATTAACTGATTCTGTTGAAAAAAGAAGGGGTGAAATTGTAGAAGTGTCTTCTCAAGCTGAGCACAAGAATAGTGAGCAGCAGGTTGATGCTCATGGAGCATCTTATAAAAGTTTAGAAGGTACAAGTGTAGGACAAGCTTCAGGTTCCCAAAAAAGGCCAATTGTTAAGTCACATTTAGACCAAAGAAAGCTTATGGAGCAAGGTCAAAGTCGAAGTCTTGTAAGAAGTAAAGTATCTCTTGCTCATGTAATCCAGCAAGCAGAAGGTCAGAGAAGTGGGTGGTCAAAACGTAAAGCAGTTTCTATTGCTGAGAAGCTTGAACAAGAGAATCTGAGATTGGAGCCTAGATCAAGAAGCTTGCTATGCTGGAAAGCATCAAGAGTGACTAGGCGAAAGCTGTCACGCTTGAAAATTCGAAGCCGAAAACCACGTGCCCTGCTGAATCTAGTCTCATGTGGGAAATGTCTGGCTACAAAATCTCCGAGGTAGTTTTGGGAATGTTGTGGGGTTCATTACTATTCAATAGCCATTTGTATTGCCTCTATTTAGGCTTTTTCCTGATGTGTCATGGAGTCCAATTTTACGGGGTCAAGCCTTTTTTTCTTTTCATTTAATTAAATAAAAGCTTGTAGTTATATATCTGATGAGGAAAATGTAGGAAAGTAATTATTAAACTAGTAAATTCCATTTTAGTGATAAGATATTGTATATTTTAATGGAGCTTCAGTTTACAATTTTTTGTCCCCACTGGTTTATGGTCAGTGTTGTTC 3854 0.4198 MTRAVRSRVLKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSIMRDLVVLQRSRSLRDPSASPPSWQSPSVVDLLFKRVDNDAASLGGRRSVGVERRKEGRRLSGTSPPLVSIGSSRVAPGEIGRANDGVTAPSERSSRSGLGDARRVGREESGRKNDRPDFLDVNQVEPLNQAGKSLAEDVISRHSESKDRKSKQRGKNVRDVQLKTLSEQLNDVPLDSDDLASSNIHFRGRFPRQEKIIEEAEPRMRSHGSGMNRGKRRKFRSARRTRVATTSRDIGAENELSVASNTLAQASSHQKYQLEEADEFADENVTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSFSCGLSDSRLKKGPFAANGRNISEMPVASEHSSSCTKSDAEALPLLVEASGSHASTENACWDHDYSGELGLFGDNLFKHDVDSDLASEARSGDQRKLRGNRHCRHQSLTQKYMPRTFRDMVGQHLVAQALSNAVMKRKVGLLYVFYGPHGTGKTSCARIFARALNCNSSEHPKPCGFCNYCIAHDMGKSRNIREVGPVSNFDFESIMDLLDNMIVSQLPSHYRVFIFDDCDTLSTDCWNAISKVIDRAPRRVVFILVSSSLDVLPHIIISRCQKFFFPKLKDADIIYTLQSVATKEGLEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGTYDFTKERRRRKFFRRQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYVLPTSSDNSFNHSPFALKDTDAREAARLTANPVDIPNKARRLSMDARIENFHAGSSADGMTKGVGSEKKRHSVSGFTPQHVHSQATDKTRMDERHILGNHRKEIEEIWLEVLERIQVTWLKEFLFKEGKLISISFGAAPTVQLILSSQLTKSTAEKFRGHILQAFESVLGSSITIEIRCESNKDAGLAVQQQLTLPTTNDSLSQIRDFNGVSTVAHPSLTDSVEKRRGEIVEVSSQAEHKNSEQQVDAHGASYKSLEGTSVGQASGSQKRPIVKSHLDQRKLMEQGQSRSLVRSKVSLAHVIQQAEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKIRSRKPRALLNLVSCGKCLATKSPR 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02211 1190 MobiDBLite consensus disorder prediction 864 899 - -
Pste2g02211 1190 SUPERFAMILY post-AAA+ oligomerization domain-like 701 804 IPR008921 GO:0003677|GO:0006260
Pste2g02211 1190 MobiDBLite consensus disorder prediction 96 171 - -
Pste2g02211 1190 CDD HLD_clamp_pol_III_gamma_tau 630 693 IPR045085 -
Pste2g02211 1190 NCBIfam DNA polymerase III subunit gamma/tau 456 804 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Pste2g02211 1190 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 459 842 - -
Pste2g02211 1190 MobiDBLite consensus disorder prediction 186 211 - -
Pste2g02211 1190 Pfam DNA polymerase III subunits gamma and tau domain III 686 804 IPR022754 GO:0003887
Pste2g02211 1190 Coils Coil 766 793 - -
Pste2g02211 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 677 IPR027417 -
Pste2g02211 1190 Gene3D - 631 693 - -
Pste2g02211 1190 SMART AAA_5 489 630 IPR003593 GO:0016887
Pste2g02211 1190 MobiDBLite consensus disorder prediction 187 210 - -
Pste2g02211 1190 MobiDBLite consensus disorder prediction 252 281 - -
Pste2g02211 1190 MobiDBLite consensus disorder prediction 259 275 - -
Pste2g02211 1190 Gene3D - 448 627 IPR027417 -
Pste2g02211 1190 Pfam DNA polymerase III, delta subunit 473 630 - -
Pste2g02211 1190 FunFam DNA polymerase III subunit gamma/tau 452 629 - -
Pste2g02211 1190 MobiDBLite consensus disorder prediction 146 169 - -
Pste2g02211 1190 FunFam DNA polymerase III subunit gamma/tau 631 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02211 Pste-Chr2 22125894 22131700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02211 456 754 Core DNA Replication Machinery Family AT1G21690 23.588 1.66e-13 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02211 2 22125894 22131700 Pste2g02211 2 22125894 22131700 ECH